RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 4932415D10RikA0A1W2P6U8 4986 aa13.59□□□□□ -0.23
Cpsf4-201ENSMUST00000070487 Gm20604F8WIA3 75 aa13.58□□□□□ -0.24
Cpsf4-201ENSMUST00000070487 Tmem213Q08EA8 116 aa13.57□□□□□ -0.24
Cpsf4-201ENSMUST00000070487 Gm26920S4R2A5 56 aa13.55□□□□□ -0.24
Cpsf4-201ENSMUST00000070487 Cypt15B1AXS0 87 aa13.54□□□□□ -0.24
Cpsf4-201ENSMUST00000070487 UqcrqQ9CQ69 82 aa13.53□□□□□ -0.24
Cpsf4-201ENSMUST00000070487 Ubr4A2AN08 5180 aa13.52□□□□□ -0.25
Cpsf4-201ENSMUST00000070487 C130032M10RikQ8C888 123 aa13.5□□□□□ -0.25
Cpsf4-201ENSMUST00000070487 Mrpl34Q99N91 92 aa13.5□□□□□ -0.25
Cpsf4-201ENSMUST00000070487 Gm37013Q8K491 104 aa13.49□□□□□ -0.25
Cpsf4-201ENSMUST00000070487 Gm26620Q9CY65 116 aa13.47□□□□□ -0.25
Cpsf4-201ENSMUST00000070487 Mtatp8P03930 67 aa13.46□□□□□ -0.25
Cpsf4-201ENSMUST00000070487 Xcl1P47993 114 aa13.44□□□□□ -0.26
Cpsf4-201ENSMUST00000070487 Krtap15-1Q9QZU5 150 aa13.42□□□□□ -0.26
Cpsf4-201ENSMUST00000070487 Defa21Q8C1P2 93 aa13.39□□□□□ -0.27
Cpsf4-201ENSMUST00000070487 Ormdl1Q921I0 153 aa13.39□□□□□ -0.27
Cpsf4-201ENSMUST00000070487 Sec61bQ9CQS8 96 aaKnown RBP13.34□□□□□ -0.27
Cpsf4-201ENSMUST00000070487 Igkv3-3A0A140T8Q0 119 aa13.31□□□□□ -0.28
Cpsf4-201ENSMUST00000070487 Reg3aO09037 175 aa13.3□□□□□ -0.28
Cpsf4-201ENSMUST00000070487 2310057N15RikQ9D6T8 200 aa13.25□□□□□ -0.29
Cpsf4-201ENSMUST00000070487 Rpl37Q9D823 97 aa13.24□□□□□ -0.29
Cpsf4-201ENSMUST00000070487 Lyrm7Q9DA03 104 aa13.19□□□□□ -0.3
Cpsf4-201ENSMUST00000070487 Krtap1-3A2A588 173 aa13.17□□□□□ -0.3
Cpsf4-201ENSMUST00000070487 BikO70337 150 aa13.17□□□□□ -0.3
Cpsf4-201ENSMUST00000070487 Pxt1Q8K459 51 aa13.14□□□□□ -0.31
Cpsf4-201ENSMUST00000070487 MplkipQ9D011 178 aa13.14□□□□□ -0.31
Cpsf4-201ENSMUST00000070487 Ubl5Q9EPV8 73 aa13.13□□□□□ -0.31
Cpsf4-201ENSMUST00000070487 Defb13Q8R2I4 64 aa13.1□□□□□ -0.31
Cpsf4-201ENSMUST00000070487 Scgb1b2O35176 93 aa13.09□□□□□ -0.31
Cpsf4-201ENSMUST00000070487 Gtf2h5Q8K2X8 71 aa13.08□□□□□ -0.32
Cpsf4-201ENSMUST00000070487 Igkv8-19A0A0G2JFN8 121 aa13.07□□□□□ -0.32
Cpsf4-201ENSMUST00000070487 2310034C09RikQ9D746 214 aa13.06□□□□□ -0.32
Cpsf4-201ENSMUST00000070487 Gm45213A0A0U1RNZ6 101 aa13.04□□□□□ -0.32
Cpsf4-201ENSMUST00000070487 Gm10267M0QWD8 85 aa13.02□□□□□ -0.32
Cpsf4-201ENSMUST00000070487 7530416G11RikJ3QJX6 159 aa12.95□□□□□ -0.34
Cpsf4-201ENSMUST00000070487 Crct1Q6PAI5 102 aa12.95□□□□□ -0.34
Cpsf4-201ENSMUST00000070487 ZanO88799 5376 aa12.95□□□□□ -0.34
Cpsf4-201ENSMUST00000070487 Fam240bJ3QMB3 78 aa12.95□□□□□ -0.34
Cpsf4-201ENSMUST00000070487 Trav3-1Q5R1I8 114 aa12.91□□□□□ -0.34
Cpsf4-201ENSMUST00000070487 Rnase13Q5GAM7 153 aa12.89□□□□□ -0.35
Cpsf4-201ENSMUST00000070487 Apoc4Q61268 124 aa12.86□□□□□ -0.35
Cpsf4-201ENSMUST00000070487 Krtap3-2Q9D638 99 aa12.81□□□□□ -0.36
Cpsf4-201ENSMUST00000070487 Krtap3-3Q9D7P0 99 aa12.81□□□□□ -0.36
Cpsf4-201ENSMUST00000070487 Tmem254aP0DN89 123 aa12.8□□□□□ -0.36
Cpsf4-201ENSMUST00000070487 Tmem254bP0DN90 123 aa12.8□□□□□ -0.36
Cpsf4-201ENSMUST00000070487 Tmem254cP0DN91 123 aa12.8□□□□□ -0.36
Cpsf4-201ENSMUST00000070487 Prr15lQ8JZM2 100 aa12.8□□□□□ -0.36
Cpsf4-201ENSMUST00000070487 Fat4Q2PZL6 4981 aa12.78□□□□□ -0.36
Cpsf4-201ENSMUST00000070487 LorP18165 486 aa12.78□□□□□ -0.36
Cpsf4-201ENSMUST00000070487 Krtap16-3Q8C1I6 86 aa12.74□□□□□ -0.37
Cpsf4-201ENSMUST00000070487 A0A286YE49 62 aa12.7□□□□□ -0.38
Cpsf4-201ENSMUST00000070487 Krtap19-1Q925H2 87 aa12.7□□□□□ -0.38
Cpsf4-201ENSMUST00000070487 Krtap19-3Q925H6 87 aa12.7□□□□□ -0.38
Cpsf4-201ENSMUST00000070487 Samd13D3YUG0 102 aa12.64□□□□□ -0.39
Cpsf4-201ENSMUST00000070487 Fam229aB2KGE5 128 aa12.63□□□□□ -0.39
Cpsf4-201ENSMUST00000070487 Hist1h4aP62806 103 aaKnown RBP12.61□□□□□ -0.39
Cpsf4-201ENSMUST00000070487 Gm28539A0A087WSL9 92 aa12.6□□□□□ -0.39
Cpsf4-201ENSMUST00000070487 Gm4491E0CX42 125 aa12.59□□□□□ -0.39
Cpsf4-201ENSMUST00000070487 Rnf213E9Q555 5152 aaKnown RBP12.59□□□□□ -0.39
Cpsf4-201ENSMUST00000070487 Gm17416Q30KP4 66 aa12.59□□□□□ -0.39
Cpsf4-201ENSMUST00000070487 1700042G07RikB1AUF7 90 aa12.58□□□□□ -0.4
Cpsf4-201ENSMUST00000070487 Naa38Q9D2U5 125 aa12.56□□□□□ -0.4
Cpsf4-201ENSMUST00000070487 Spink8Q09TK9 105 aa12.55□□□□□ -0.4
Cpsf4-201ENSMUST00000070487 Gm10318A0A1W2P728 225 aa12.52□□□□□ -0.4
Cpsf4-201ENSMUST00000070487 Gm19402J3QJV4 266 aa12.48□□□□□ -0.41
Cpsf4-201ENSMUST00000070487 BatfO35284 125 aa12.48□□□□□ -0.41
Cpsf4-201ENSMUST00000070487 Krtap1-4Q3V2D6 188 aa12.45□□□□□ -0.42
Cpsf4-201ENSMUST00000070487 1700074P13RikQ9D9G7 251 aa12.4□□□□□ -0.42
Cpsf4-201ENSMUST00000070487 Chtf8P0CG14 533 aa12.37□□□□□ -0.43
Cpsf4-201ENSMUST00000070487 Gm10061D3Z714 54 aa12.36□□□□□ -0.43
Cpsf4-201ENSMUST00000070487 Atp5eP56382 52 aa12.35□□□□□ -0.43
Cpsf4-201ENSMUST00000070487 Fam229bQ8CF36 80 aa12.34□□□□□ -0.43
Cpsf4-201ENSMUST00000070487 9230102O04RikA2ASX7 82 aa12.33□□□□□ -0.44
Cpsf4-201ENSMUST00000070487 Q8BGJ3 129 aa12.3□□□□□ -0.44
Cpsf4-201ENSMUST00000070487 Gm10999F6Q4M4 69 aa12.26□□□□□ -0.45
Cpsf4-201ENSMUST00000070487 Anapc13Q8R034 74 aa12.25□□□□□ -0.45
Cpsf4-201ENSMUST00000070487 Ndufc1Q9CQY9 76 aa12.25□□□□□ -0.45
Cpsf4-201ENSMUST00000070487 Krtap13-1Q8K198 168 aa12.2□□□□□ -0.46
Cpsf4-201ENSMUST00000070487 2210017I01RikA0A0A6YVV1 95 aa12.11□□□□□ -0.47
Cpsf4-201ENSMUST00000070487 Defb38Q7TNV7 63 aa12.1□□□□□ -0.47
Cpsf4-201ENSMUST00000070487 4930507D05RikQ8C9C9 103 aa12.07□□□□□ -0.48
Cpsf4-201ENSMUST00000070487 SspoQ8CG65 4998 aa12.05□□□□□ -0.48
Cpsf4-201ENSMUST00000070487 Krtap1-5A2A590 122 aa12.04□□□□□ -0.48
Cpsf4-201ENSMUST00000070487 Gm11569B1AQB1 180 aa12.01□□□□□ -0.49
Cpsf4-201ENSMUST00000070487 2310079G19RikQ9D6L6 185 aa11.97□□□□□ -0.49
Cpsf4-201ENSMUST00000070487 Gm21798J3QNU5 87 aa11.95□□□□□ -0.5
Cpsf4-201ENSMUST00000070487 Atox1O08997 68 aaKnown RBP11.93□□□□□ -0.5
Cpsf4-201ENSMUST00000070487 Gm11562A0PK51 136 aa11.89□□□□□ -0.51
Cpsf4-201ENSMUST00000070487 4930518I15RikQ3V2W7 57 aa11.87□□□□□ -0.51
Cpsf4-201ENSMUST00000070487 Gm10160F6Y577 67 aa11.85□□□□□ -0.51
Cpsf4-201ENSMUST00000070487 Spint4Q9D263 159 aa11.79□□□□□ -0.52
Cpsf4-201ENSMUST00000070487 Krtap17-1A2A5X6 109 aa11.78□□□□□ -0.52
Cpsf4-201ENSMUST00000070487 Serp2Q6TAW2 65 aa11.77□□□□□ -0.53
Cpsf4-201ENSMUST00000070487 Coa6Q8BGD8 79 aa11.76□□□□□ -0.53
Cpsf4-201ENSMUST00000070487 Krtap3-1A2A591 98 aa11.68□□□□□ -0.54
Cpsf4-201ENSMUST00000070487 Gm10643Q3URG9 111 aa11.68□□□□□ -0.54
Cpsf4-201ENSMUST00000070487 Prr13Q9CQJ5 137 aa11.68□□□□□ -0.54
Cpsf4-201ENSMUST00000070487 B230307C23RikQ8BLB2 64 aa11.67□□□□□ -0.54
Cpsf4-201ENSMUST00000070487 Krtap4-2B1AQ85 167 aa11.65□□□□□ -0.54
Cpsf4-201ENSMUST00000070487 Defb1P56386 69 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms