RNA–Protein interactions for RNA: ENSMUST00000054099.15

Lhx3-202, Transcript of LIM/homeobox protein Lhx3, mousemouse

TSL 1 (best) BASIC

Gene Lhx3, Length 2,184 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3-202ENSMUST00000054099 Nupr2Q497P3 102 aa9.93□□□□□ -0.82
Lhx3-202ENSMUST00000054099 Znf706Q9D115 76 aaKnown RBP9.93□□□□□ -0.82
Lhx3-202ENSMUST00000054099 Cdk2ap2Q9CPY4 127 aa9.92□□□□□ -0.82
Lhx3-202ENSMUST00000054099 Pla2g10Q9QXX3 151 aa9.92□□□□□ -0.82
Lhx3-202ENSMUST00000054099 Ryr2E9Q401 4966 aaKnown RBP9.9□□□□□ -0.82
Lhx3-202ENSMUST00000054099 Gm21886J3QJU9 214 aa9.88□□□□□ -0.83
Lhx3-202ENSMUST00000054099 Dnah2P0C6F1 4456 aa9.88□□□□□ -0.83
Lhx3-202ENSMUST00000054099 Igkv3-5A0A140T8M6 119 aa9.87□□□□□ -0.83
Lhx3-202ENSMUST00000054099 Defb40Q70KL2 73 aa9.87□□□□□ -0.83
Lhx3-202ENSMUST00000054099 Zcchc13Q9D548 170 aa9.87□□□□□ -0.83
Lhx3-202ENSMUST00000054099 Wfdc3Q14AE4 130 aa9.87□□□□□ -0.83
Lhx3-202ENSMUST00000054099 PscaP57096 123 aa9.86□□□□□ -0.83
Lhx3-202ENSMUST00000054099 Stard9Q80TF6 4561 aa9.85□□□□□ -0.83
Lhx3-202ENSMUST00000054099 Dnah5Q8VHE6 4621 aa9.83□□□□□ -0.84
Lhx3-202ENSMUST00000054099 Gm2696A0A1W2P709 240 aa9.82□□□□□ -0.84
Lhx3-202ENSMUST00000054099 Prol1E9PYQ4 312 aa9.82□□□□□ -0.84
Lhx3-202ENSMUST00000054099 Pkd1O08852 4293 aa9.82□□□□□ -0.84
Lhx3-202ENSMUST00000054099 Reg3aO09037 175 aa9.8□□□□□ -0.84
Lhx3-202ENSMUST00000054099 A730009L09RikA0A1B0GS82 72 aa9.78□□□□□ -0.84
Lhx3-202ENSMUST00000054099 Ryr1E9PZQ0 5035 aa9.74□□□□□ -0.85
Lhx3-202ENSMUST00000054099 Gm2310J3QNJ2 377 aa9.73□□□□□ -0.85
Lhx3-202ENSMUST00000054099 Sprr4Q8CGN8 76 aa9.73□□□□□ -0.85
Lhx3-202ENSMUST00000054099 Dync1h1Q9JHU4 4644 aaKnown RBP9.71□□□□□ -0.85
Lhx3-202ENSMUST00000054099 Odf3bQ5M8M2 238 aa9.71□□□□□ -0.85
Lhx3-202ENSMUST00000054099 Camk2n2Q78WH7 79 aa9.71□□□□□ -0.86
Lhx3-202ENSMUST00000054099 Gm10267M0QWD8 85 aa9.7□□□□□ -0.86
Lhx3-202ENSMUST00000054099 Sprr1aQ62266 144 aa9.69□□□□□ -0.86
Lhx3-202ENSMUST00000054099 6030445D17RikE9Q8F9 148 aa9.68□□□□□ -0.86
Lhx3-202ENSMUST00000054099 Romo1P60603 79 aa9.68□□□□□ -0.86
Lhx3-202ENSMUST00000054099 Fat1A0A1L1SQU7 4645 aa9.68□□□□□ -0.86
Lhx3-202ENSMUST00000054099 Krtap13O88375 197 aa9.64□□□□□ -0.87
Lhx3-202ENSMUST00000054099 Prm2P07978 107 aa9.64□□□□□ -0.87
Lhx3-202ENSMUST00000054099 1700018G05RikA0A1B0GSI2 66 aa9.64□□□□□ -0.87
Lhx3-202ENSMUST00000054099 Pkhd1E9PZ36 4059 aa9.62□□□□□ -0.87
Lhx3-202ENSMUST00000054099 SycnQ8VCK7 134 aa9.6□□□□□ -0.87
Lhx3-202ENSMUST00000054099 Dmac1Q9CQ00 111 aa9.6□□□□□ -0.87
Lhx3-202ENSMUST00000054099 Rpl37aP61514 92 aa9.6□□□□□ -0.87
Lhx3-202ENSMUST00000054099 SacsQ9JLC8 4582 aa9.58□□□□□ -0.88
Lhx3-202ENSMUST00000054099 1600014C23RikQ9DAX4 101 aa9.58□□□□□ -0.88
Lhx3-202ENSMUST00000054099 Fam168bQ80XQ8 194 aa9.57□□□□□ -0.88
Lhx3-202ENSMUST00000054099 Gm11627A6PWP4 55 aa9.56□□□□□ -0.88
Lhx3-202ENSMUST00000054099 ApobE9Q414 4505 aa9.56□□□□□ -0.88
Lhx3-202ENSMUST00000054099 Gm28230A0A0A0MQ91 144 aa9.52□□□□□ -0.89
Lhx3-202ENSMUST00000054099 Gm10065F6TJM2 114 aa9.52□□□□□ -0.89
Lhx3-202ENSMUST00000054099 Krtap29-1A2A5X4 342 aa9.51□□□□□ -0.89
Lhx3-202ENSMUST00000054099 P84750 121 aa9.47□□□□□ -0.89
Lhx3-202ENSMUST00000054099 Defb38Q7TNV7 63 aa9.47□□□□□ -0.89
Lhx3-202ENSMUST00000054099 Defb9Q8R2I6 67 aa9.44□□□□□ -0.9
Lhx3-202ENSMUST00000054099 Kmt2cQ8BRH4 4903 aa9.41□□□□□ -0.9
Lhx3-202ENSMUST00000054099 Gpr15lA0A0B4J1N3 78 aa9.41□□□□□ -0.9
Lhx3-202ENSMUST00000054099 Gm27235Q3UW50 83 aa9.4□□□□□ -0.91
Lhx3-202ENSMUST00000054099 Gm21798J3QNU5 87 aa9.38□□□□□ -0.91
Lhx3-202ENSMUST00000054099 Adm2Q7TNK8 150 aa9.36□□□□□ -0.91
Lhx3-202ENSMUST00000054099 HrnrQ8VHD8 2496 aa9.34□□□□□ -0.91
Lhx3-202ENSMUST00000054099 Vps13bQ80TY5 3993 aa9.32□□□□□ -0.92
Lhx3-202ENSMUST00000054099 Lrp1bQ9JI18 4599 aa9.32□□□□□ -0.92
Lhx3-202ENSMUST00000054099 Krtap14O08640 167 aa9.31□□□□□ -0.92
Lhx3-202ENSMUST00000054099 Dnah8Q91XQ0 4731 aa9.3□□□□□ -0.92
Lhx3-202ENSMUST00000054099 Hectd4E9Q2E4 4418 aa9.3□□□□□ -0.92
Lhx3-202ENSMUST00000054099 NbdyA0A0N4SUI7 68 aa9.29□□□□□ -0.92
Lhx3-202ENSMUST00000054099 Tnp2P11378 117 aa9.29□□□□□ -0.92
Lhx3-202ENSMUST00000054099 Gm10139O88245 57 aa9.26□□□□□ -0.93
Lhx3-202ENSMUST00000054099 Wfdc10Q3V2J9 124 aa9.26□□□□□ -0.93
Lhx3-202ENSMUST00000054099 Gm10642Q3TWM1 71 aa9.25□□□□□ -0.93
Lhx3-202ENSMUST00000054099 RetnlbQ99P86 105 aa9.23□□□□□ -0.93
Lhx3-202ENSMUST00000054099 Pkhd1l1Q80ZA4 4249 aa9.22□□□□□ -0.93
Lhx3-202ENSMUST00000054099 Gm21887J3QQ04 176 aa9.22□□□□□ -0.93
Lhx3-202ENSMUST00000054099 Fat2Q5F226 4351 aa9.21□□□□□ -0.93
Lhx3-202ENSMUST00000054099 Herc2Q4U2R1 4836 aa9.21□□□□□ -0.93
Lhx3-202ENSMUST00000054099 Abca13Q5SSE9 5034 aa9.18□□□□□ -0.94
Lhx3-202ENSMUST00000054099 Birc6O88738 4882 aa9.15□□□□□ -0.94
Lhx3-202ENSMUST00000054099 Lrp1Q91ZX7 4545 aaKnown RBP9.14□□□□□ -0.95
Lhx3-202ENSMUST00000054099 Kiaa1109A2AAE1 5005 aa9.13□□□□□ -0.95
Lhx3-202ENSMUST00000054099 Fat3Q8BNA6 4555 aa9.1□□□□□ -0.95
Lhx3-202ENSMUST00000054099 Krtap19-5O08632 62 aa9.1□□□□□ -0.95
Lhx3-202ENSMUST00000054099 Q8K1L6 76 aa9.07□□□□□ -0.96
Lhx3-202ENSMUST00000054099 Anapc11Q9CPX9 84 aa9.05□□□□□ -0.96
Lhx3-202ENSMUST00000054099 Defb39Q70KL3 74 aa9.03□□□□□ -0.96
Lhx3-202ENSMUST00000054099 Ndufaf8A2AMZ4 74 aa9.02□□□□□ -0.97
Lhx3-202ENSMUST00000054099 HydinQ80W93 5154 aa8.99□□□□□ -0.97
Lhx3-202ENSMUST00000054099 Gm3880A0A1B0GSB3 72 aa8.97□□□□□ -0.97
Lhx3-202ENSMUST00000054099 Dnhd1D3Z2X2 4750 aa8.97□□□□□ -0.97
Lhx3-202ENSMUST00000054099 PcloQ9QYX7 5068 aa8.96□□□□□ -0.98
Lhx3-202ENSMUST00000054099 Gm20537G3UYK7 97 aa8.92□□□□□ -0.98
Lhx3-202ENSMUST00000054099 Gm10999F6Q4M4 69 aa8.91□□□□□ -0.98
Lhx3-202ENSMUST00000054099 Rnase13Q5GAM7 153 aa8.89□□□□□ -0.99
Lhx3-202ENSMUST00000054099 Defb13Q8R2I4 64 aa8.89□□□□□ -0.99
Lhx3-202ENSMUST00000054099 2310079G19RikQ9D6L6 185 aa8.88□□□□□ -0.99
Lhx3-202ENSMUST00000054099 Mycbp2Q7TPH6 4711 aa8.86□□□□□ -0.99
Lhx3-202ENSMUST00000054099 Gm16253D3Z167 63 aa8.83□□□□□ -1
Lhx3-202ENSMUST00000054099 Defb1P56386 69 aa8.81□□□□□ -1
Lhx3-202ENSMUST00000054099 Gm9736A0A1W2P7N1 277 aa8.79□□□□□ -1
Lhx3-202ENSMUST00000054099 Lce1mQ9CR91 182 aa8.78□□□□□ -1
Lhx3-202ENSMUST00000054099 CriptO70333 101 aa8.76□□□□□ -1.01
Lhx3-202ENSMUST00000054099 D6Ertd527eA0A0N4SWI3 464 aa8.75□□□□□ -1.01
Lhx3-202ENSMUST00000054099 Spaca4Q80ZQ0 127 aa8.75□□□□□ -1.01
Lhx3-202ENSMUST00000054099 4930507D05RikQ8C9C9 103 aa8.74□□□□□ -1.01
Lhx3-202ENSMUST00000054099 Lrp2A2ARV4 4660 aa8.69□□□□□ -1.02
Lhx3-202ENSMUST00000054099 Sec61bQ9CQS8 96 aaKnown RBP8.65□□□□□ -1.02
Lhx3-202ENSMUST00000054099 Herc1E9PZP8 4859 aa8.65□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms