RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Dnah7bL7N1Y0 4068 aa4.4□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Defb9Q8R2I6 67 aa4.4□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Gm12216A0A1W2P827 62 aa4.4□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Ccdc179J3QM76 67 aa4.4□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Defb1P56386 69 aa4.4□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Cystm1Q8K353 104 aa4.4□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Igkv8-28A0A0G2JE47 121 aa4.39□□□□□ -1.71
Bdnf-201ENSMUST00000053317 A330070K13RikQ8CA53 115 aa4.39□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Psors1c2Q80ZC9 134 aa4.38□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Gm10999F6Q4M4 69 aa4.38□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Sprr1bQ62267 153 aa4.38□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Stard9Q80TF6 4561 aa4.38□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Kmt2aP55200 3966 aa4.37□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Elof1P60003 83 aa4.37□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Fam104aA2A6P4 185 aa4.36□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Mp68P56379 58 aa4.36□□□□□ -1.71
Bdnf-201ENSMUST00000053317 A930002H24RikQ8C8Y3 163 aa4.36□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Defb39Q70KL3 74 aa4.36□□□□□ -1.71
Bdnf-201ENSMUST00000053317 C530025M09RikF6RGA8 229 aa4.36□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Gm11627A6PWP4 55 aa4.35□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Defb50Q6TU36 73 aa4.35□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Q8BT88 171 aa4.35□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Q8K1L6 76 aa4.35□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Anapc11Q9CPX9 84 aa4.35□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Chtf8P0CG14 533 aa4.34□□□□□ -1.71
Bdnf-201ENSMUST00000053317 Smim29Q8R043 75 aa4.34□□□□□ -1.72
Bdnf-201ENSMUST00000053317 Gpr15lA0A0B4J1N3 78 aa4.32□□□□□ -1.72
Bdnf-201ENSMUST00000053317 Gm10065F6TJM2 114 aa4.31□□□□□ -1.72
Bdnf-201ENSMUST00000053317 Q8BGJ3 129 aa4.3□□□□□ -1.72
Bdnf-201ENSMUST00000053317 Gm7276Q3TYW4 209 aa4.3□□□□□ -1.72
Bdnf-201ENSMUST00000053317 Dmac1Q9CQ00 111 aa4.29□□□□□ -1.72
Bdnf-201ENSMUST00000053317 Uqcr11Q9CPX8 56 aa4.29□□□□□ -1.72
Bdnf-201ENSMUST00000053317 Gm17606F6ZL36 78 aa4.28□□□□□ -1.72
Bdnf-201ENSMUST00000053317 Sprr1aQ62266 144 aa4.28□□□□□ -1.72
Bdnf-201ENSMUST00000053317 Gm26620Q9CY65 116 aa4.26□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Zcchc13Q9D548 170 aa4.26□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Prol1E9PYQ4 312 aa4.26□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Gm3646F6S692 53 aa4.25□□□□□ -1.73
Bdnf-201ENSMUST00000053317 NbdyA0A0N4SUI7 68 aa4.25□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Rnase13Q5GAM7 153 aa4.25□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Spaca4Q80ZQ0 127 aa4.25□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Krtap14O08640 167 aa4.24□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Gm9821Q8K076 103 aa4.24□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Krtap29-1A2A5X4 342 aa4.24□□□□□ -1.73
Bdnf-201ENSMUST00000053317 6030445D17RikE9Q8F9 148 aa4.24□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Pla2g10Q9QXX3 151 aa4.24□□□□□ -1.73
Bdnf-201ENSMUST00000053317 1700042G07RikB1AUF7 90 aa4.24□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Dnah5Q8VHE6 4621 aa4.23□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Krtap4-1Q3UUY3 169 aa4.22□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Gm10320E9PW43 113 aa4.22□□□□□ -1.73
Bdnf-201ENSMUST00000053317 4930507D05RikQ8C9C9 103 aa4.21□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Dnah17Q69Z23 4481 aa4.21□□□□□ -1.73
Bdnf-201ENSMUST00000053317 Gm27235Q3UW50 83 aa4.21□□□□□ -1.74
Bdnf-201ENSMUST00000053317 Dnah9B1AR51 4484 aa4.2□□□□□ -1.74
Bdnf-201ENSMUST00000053317 Cypt15B1AXS0 87 aa4.2□□□□□ -1.74
Bdnf-201ENSMUST00000053317 Gm3880A0A1B0GSB3 72 aa4.2□□□□□ -1.74
Bdnf-201ENSMUST00000053317 Dnah11E9Q7N9 4488 aa4.2□□□□□ -1.74
Bdnf-201ENSMUST00000053317 Dnah7aE9Q0T8 4024 aa4.19□□□□□ -1.74
Bdnf-201ENSMUST00000053317 CriptO70333 101 aa4.18□□□□□ -1.74
Bdnf-201ENSMUST00000053317 Dnah3Q8BW94 4083 aa4.17□□□□□ -1.74
Bdnf-201ENSMUST00000053317 Ryr2E9Q401 4966 aaKnown RBP4.17□□□□□ -1.74
Bdnf-201ENSMUST00000053317 Herc2Q4U2R1 4836 aa4.17□□□□□ -1.74
Bdnf-201ENSMUST00000053317 4933415A04RikQ9D443 101 aa4.17□□□□□ -1.74
Bdnf-201ENSMUST00000053317 Vps13dB1ART2 4390 aa4.16□□□□□ -1.74
Bdnf-201ENSMUST00000053317 Kiaa1109A2AAE1 5005 aa4.15□□□□□ -1.74
Bdnf-201ENSMUST00000053317 Gm21798J3QNU5 87 aa4.14□□□□□ -1.75
Bdnf-201ENSMUST00000053317 Dync2h1Q45VK7 4306 aa4.13□□□□□ -1.75
Bdnf-201ENSMUST00000053317 Gm20538F6Z9R1 75 aa4.12□□□□□ -1.75
Bdnf-201ENSMUST00000053317 2310034C09RikQ9D746 214 aa4.12□□□□□ -1.75
Bdnf-201ENSMUST00000053317 Gm9736A0A1W2P7N1 277 aa4.12□□□□□ -1.75
Bdnf-201ENSMUST00000053317 A730071L15RikQ8C4X0 137 aa4.12□□□□□ -1.75
Bdnf-201ENSMUST00000053317 Dnah1E9Q8T7 4250 aa4.12□□□□□ -1.75
Bdnf-201ENSMUST00000053317 Krtap19-5O08632 62 aa4.1□□□□□ -1.75
Bdnf-201ENSMUST00000053317 Cypt14J3QPF7 87 aa4.1□□□□□ -1.75
Bdnf-201ENSMUST00000053317 HydinQ80W93 5154 aa4.1□□□□□ -1.75
Bdnf-201ENSMUST00000053317 Dnah7cA0A087WR13 4024 aa4.08□□□□□ -1.76
Bdnf-201ENSMUST00000053317 Dync1h1Q9JHU4 4644 aaKnown RBP4.08□□□□□ -1.76
Bdnf-201ENSMUST00000053317 Fat1A0A1L1SQU7 4645 aa4.07□□□□□ -1.76
Bdnf-201ENSMUST00000053317 Odf3bQ5M8M2 238 aa4.06□□□□□ -1.76
Bdnf-201ENSMUST00000053317 Lrp1Q91ZX7 4545 aaKnown RBP4.06□□□□□ -1.76
Bdnf-201ENSMUST00000053317 PcloQ9QYX7 5068 aa4.05□□□□□ -1.76
Bdnf-201ENSMUST00000053317 Gm18596A0A1W2P860 280 aa4.05□□□□□ -1.76
Bdnf-201ENSMUST00000053317 Gm37013Q8K491 104 aa4.03□□□□□ -1.76
Bdnf-201ENSMUST00000053317 Gm10139O88245 57 aa4.02□□□□□ -1.77
Bdnf-201ENSMUST00000053317 Mycbp2Q7TPH6 4711 aa4.02□□□□□ -1.77
Bdnf-201ENSMUST00000053317 Gm11555B1AQ89 175 aa4.02□□□□□ -1.77
Bdnf-201ENSMUST00000053317 ApobE9Q414 4505 aa4.02□□□□□ -1.77
Bdnf-201ENSMUST00000053317 SacsQ9JLC8 4582 aa4.01□□□□□ -1.77
Bdnf-201ENSMUST00000053317 Abca13Q5SSE9 5034 aa4.01□□□□□ -1.77
Bdnf-201ENSMUST00000053317 Gm5965D3Z724 196 aa4.01□□□□□ -1.77
Bdnf-201ENSMUST00000053317 Lrp2A2ARV4 4660 aa4.01□□□□□ -1.77
Bdnf-201ENSMUST00000053317 Krtap15-1Q9QZU5 150 aa3.98□□□□□ -1.77
Bdnf-201ENSMUST00000053317 Lrp1bQ9JI18 4599 aa3.98□□□□□ -1.77
Bdnf-201ENSMUST00000053317 Lce1mQ9CR91 182 aa3.97□□□□□ -1.77
Bdnf-201ENSMUST00000053317 D6Ertd527eA0A0N4SWI3 464 aa3.96□□□□□ -1.78
Bdnf-201ENSMUST00000053317 A0A286YCP9 139 aa3.96□□□□□ -1.78
Bdnf-201ENSMUST00000053317 Gm11563B1AQ90 168 aa3.96□□□□□ -1.78
Bdnf-201ENSMUST00000053317 Krtap4-7Q9D732 168 aa3.96□□□□□ -1.78
Bdnf-201ENSMUST00000053317 Dnah2P0C6F1 4456 aa3.95□□□□□ -1.78
Bdnf-201ENSMUST00000053317 Gm4491E0CX42 125 aa3.95□□□□□ -1.78
Retrieved 100 of 22,080 RNA–protein pairs in 56.5 ms