RNA–Protein interactions for RNA: ENSMUST00000040498.11

Rnf39-201, Transcript of MCG22610, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf39, Length 1,579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf39-201ENSMUST00000040498 RetnlbQ99P86 105 aa13.26□□□□□ -0.29
Rnf39-201ENSMUST00000040498 Ndufc1Q9CQY9 76 aa13.25□□□□□ -0.29
Rnf39-201ENSMUST00000040498 Fat2Q5F226 4351 aa13.24□□□□□ -0.29
Rnf39-201ENSMUST00000040498 Reg3aO09037 175 aa13.24□□□□□ -0.29
Rnf39-201ENSMUST00000040498 Cystm1Q8K353 104 aa13.24□□□□□ -0.29
Rnf39-201ENSMUST00000040498 Prr15lQ8JZM2 100 aa13.2□□□□□ -0.3
Rnf39-201ENSMUST00000040498 Defb12Q8K4N3 78 aa13.19□□□□□ -0.3
Rnf39-201ENSMUST00000040498 Spaca4Q80ZQ0 127 aa13.15□□□□□ -0.3
Rnf39-201ENSMUST00000040498 Dph3Q8K0W9 82 aa13.13□□□□□ -0.31
Rnf39-201ENSMUST00000040498 Fam229bQ8CF36 80 aa13.11□□□□□ -0.31
Rnf39-201ENSMUST00000040498 7530416G11RikJ3QJX6 159 aa13.09□□□□□ -0.31
Rnf39-201ENSMUST00000040498 Gm2310J3QNJ2 377 aa13.07□□□□□ -0.32
Rnf39-201ENSMUST00000040498 4930518I15RikQ3V2W7 57 aa13.05□□□□□ -0.32
Rnf39-201ENSMUST00000040498 Serp2Q6TAW2 65 aa13.05□□□□□ -0.32
Rnf39-201ENSMUST00000040498 Fat3Q8BNA6 4555 aa13.05□□□□□ -0.32
Rnf39-201ENSMUST00000040498 Defa21Q8C1P2 93 aa13.04□□□□□ -0.32
Rnf39-201ENSMUST00000040498 Igkv3-3A0A140T8Q0 119 aa13.02□□□□□ -0.33
Rnf39-201ENSMUST00000040498 Samd13D3YUG0 102 aa13.02□□□□□ -0.33
Rnf39-201ENSMUST00000040498 Krtap19-5O08632 62 aa13.02□□□□□ -0.33
Rnf39-201ENSMUST00000040498 A0A286YE49 62 aa12.98□□□□□ -0.33
Rnf39-201ENSMUST00000040498 Spink8Q09TK9 105 aa12.98□□□□□ -0.33
Rnf39-201ENSMUST00000040498 Naa38Q9D2U5 125 aa12.98□□□□□ -0.33
Rnf39-201ENSMUST00000040498 Rps29P62274 56 aa12.98□□□□□ -0.33
Rnf39-201ENSMUST00000040498 Cypt15B1AXS0 87 aa12.94□□□□□ -0.34
Rnf39-201ENSMUST00000040498 GhrhP16043 103 aa12.93□□□□□ -0.34
Rnf39-201ENSMUST00000040498 Lrp1Q91ZX7 4545 aaKnown RBP12.91□□□□□ -0.34
Rnf39-201ENSMUST00000040498 Apoc4Q61268 124 aa12.86□□□□□ -0.35
Rnf39-201ENSMUST00000040498 Prr13Q9CQJ5 137 aa12.82□□□□□ -0.36
Rnf39-201ENSMUST00000040498 B230307C23RikQ8BLB2 64 aa12.8□□□□□ -0.36
Rnf39-201ENSMUST00000040498 BikO70337 150 aa12.79□□□□□ -0.36
Rnf39-201ENSMUST00000040498 D6Ertd527eA0A0N4SWI3 464 aa12.77□□□□□ -0.36
Rnf39-201ENSMUST00000040498 Lrp2A2ARV4 4660 aa12.77□□□□□ -0.36
Rnf39-201ENSMUST00000040498 1700074P13RikQ9D9G7 251 aa12.75□□□□□ -0.37
Rnf39-201ENSMUST00000040498 Defb13Q8R2I4 64 aa12.73□□□□□ -0.37
Rnf39-201ENSMUST00000040498 A530084C06RikQ3UTW2 186 aa12.68□□□□□ -0.38
Rnf39-201ENSMUST00000040498 Gm10267M0QWD8 85 aa12.65□□□□□ -0.38
Rnf39-201ENSMUST00000040498 Atox1O08997 68 aaKnown RBP12.64□□□□□ -0.39
Rnf39-201ENSMUST00000040498 Coa6Q8BGD8 79 aa12.63□□□□□ -0.39
Rnf39-201ENSMUST00000040498 Gm26620Q9CY65 116 aa12.63□□□□□ -0.39
Rnf39-201ENSMUST00000040498 Spint4Q9D263 159 aa12.58□□□□□ -0.4
Rnf39-201ENSMUST00000040498 Ush2AQ2QI47 5193 aa12.56□□□□□ -0.4
Rnf39-201ENSMUST00000040498 Gm28539A0A087WSL9 92 aa12.56□□□□□ -0.4
Rnf39-201ENSMUST00000040498 Scgb1b2O35176 93 aa12.55□□□□□ -0.4
Rnf39-201ENSMUST00000040498 Gm11939A2A592 99 aa12.54□□□□□ -0.4
Rnf39-201ENSMUST00000040498 Prm1P02319 51 aa12.53□□□□□ -0.4
Rnf39-201ENSMUST00000040498 Tmem258P61166 79 aa12.52□□□□□ -0.4
Rnf39-201ENSMUST00000040498 Gm7735D3YX18 52 aa12.51□□□□□ -0.41
Rnf39-201ENSMUST00000040498 Smlr1J3QMJ4 66 aa12.51□□□□□ -0.41
Rnf39-201ENSMUST00000040498 4932415D10RikA0A1W2P6U8 4986 aa12.51□□□□□ -0.41
Rnf39-201ENSMUST00000040498 Gm9736A0A1W2P7N1 277 aa12.48□□□□□ -0.41
Rnf39-201ENSMUST00000040498 Gm19935A0A1B0GSF9 52 aa12.44□□□□□ -0.42
Rnf39-201ENSMUST00000040498 Gm5767A0A0J9YTU8 78 aa12.41□□□□□ -0.42
Rnf39-201ENSMUST00000040498 Chtf8P0CG14 533 aa12.41□□□□□ -0.42
Rnf39-201ENSMUST00000040498 SmcpP15265 143 aa12.4□□□□□ -0.42
Rnf39-201ENSMUST00000040498 Gm10160F6Y577 67 aa12.33□□□□□ -0.44
Rnf39-201ENSMUST00000040498 Pet100P0DJE0 76 aa12.33□□□□□ -0.44
Rnf39-201ENSMUST00000040498 Krtap3-2Q9D638 99 aa12.33□□□□□ -0.44
Rnf39-201ENSMUST00000040498 Krtap3-3Q9D7P0 99 aa12.33□□□□□ -0.44
Rnf39-201ENSMUST00000040498 Ubr4A2AN08 5180 aa12.32□□□□□ -0.44
Rnf39-201ENSMUST00000040498 Gm9789Q8BIG3 52 aa12.32□□□□□ -0.44
Rnf39-201ENSMUST00000040498 Coa5Q99M07 74 aa12.3□□□□□ -0.44
Rnf39-201ENSMUST00000040498 Hmcn2A2AJ76 5100 aa12.3□□□□□ -0.44
Rnf39-201ENSMUST00000040498 Gm5965D3Z724 196 aa12.27□□□□□ -0.44
Rnf39-201ENSMUST00000040498 SnurfQ9WU12 71 aa12.26□□□□□ -0.45
Rnf39-201ENSMUST00000040498 Defb38Q7TNV7 63 aa12.23□□□□□ -0.45
Rnf39-201ENSMUST00000040498 Smim20D3Z7Q2 69 aa12.2□□□□□ -0.46
Rnf39-201ENSMUST00000040498 Gm10643Q3URG9 111 aa12.19□□□□□ -0.46
Rnf39-201ENSMUST00000040498 Pcp4P63054 62 aa12.17□□□□□ -0.46
Rnf39-201ENSMUST00000040498 Rps28P62858 69 aaKnown RBP12.16□□□□□ -0.46
Rnf39-201ENSMUST00000040498 A930033H14RikG5E8X6 103 aa12.15□□□□□ -0.46
Rnf39-201ENSMUST00000040498 Gm10999F6Q4M4 69 aa12.14□□□□□ -0.47
Rnf39-201ENSMUST00000040498 Gm21798J3QNU5 87 aa12.14□□□□□ -0.47
Rnf39-201ENSMUST00000040498 Serp1Q9Z1W5 66 aa12.13□□□□□ -0.47
Rnf39-201ENSMUST00000040498 Gm4491E0CX42 125 aa12.13□□□□□ -0.47
Rnf39-201ENSMUST00000040498 Q8BGJ3 129 aa12.13□□□□□ -0.47
Rnf39-201ENSMUST00000040498 Cdc42se1Q8BHL7 80 aa12.09□□□□□ -0.47
Rnf39-201ENSMUST00000040498 Rpl37Q9D823 97 aa12.08□□□□□ -0.48
Rnf39-201ENSMUST00000040498 Gm9821Q8K076 103 aa12.05□□□□□ -0.48
Rnf39-201ENSMUST00000040498 Krtap15-1Q9QZU5 150 aa12.05□□□□□ -0.48
Rnf39-201ENSMUST00000040498 2310034C09RikQ9D746 214 aa12.04□□□□□ -0.48
Rnf39-201ENSMUST00000040498 Brk1Q91VR8 75 aa12.02□□□□□ -0.49
Rnf39-201ENSMUST00000040498 4930507D05RikQ8C9C9 103 aa11.99□□□□□ -0.49
Rnf39-201ENSMUST00000040498 2310079G19RikQ9D6L6 185 aa11.97□□□□□ -0.49
Rnf39-201ENSMUST00000040498 Rnase13Q5GAM7 153 aa11.92□□□□□ -0.5
Rnf39-201ENSMUST00000040498 9230102O04RikA2ASX7 82 aa11.9□□□□□ -0.5
Rnf39-201ENSMUST00000040498 Krtap17-1A2A5X6 109 aa11.89□□□□□ -0.51
Rnf39-201ENSMUST00000040498 Gm10197F6QEY5 67 aa11.88□□□□□ -0.51
Rnf39-201ENSMUST00000040498 Phxr4P15974 95 aa11.79□□□□□ -0.52
Rnf39-201ENSMUST00000040498 Gm20661K7N787 53 aa11.78□□□□□ -0.52
Rnf39-201ENSMUST00000040498 Gm17416Q30KP4 66 aa11.71□□□□□ -0.53
Rnf39-201ENSMUST00000040498 H2al1aQ5M8Q2 105 aa11.71□□□□□ -0.53
Rnf39-201ENSMUST00000040498 H2al1eQ810S6 105 aa11.71□□□□□ -0.53
Rnf39-201ENSMUST00000040498 SptssbQ925E8 76 aa11.71□□□□□ -0.54
Rnf39-201ENSMUST00000040498 Sec61bQ9CQS8 96 aaKnown RBP11.68□□□□□ -0.54
Rnf39-201ENSMUST00000040498 Defb1P56386 69 aa11.63□□□□□ -0.55
Rnf39-201ENSMUST00000040498 H2al1bA0A087WP11 105 aa11.54□□□□□ -0.56
Rnf39-201ENSMUST00000040498 Uqcr11Q9CPX8 56 aa11.54□□□□□ -0.56
Rnf39-201ENSMUST00000040498 ZanO88799 5376 aa11.51□□□□□ -0.57
Rnf39-201ENSMUST00000040498 Ndufb1P0DN34 57 aa11.5□□□□□ -0.57
Rnf39-201ENSMUST00000040498 Limd2Q8BGB5 128 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms