RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Rpl37aP61514 92 aa13,57□□□□□ -0,24
Ptx3-201ENSMUST00000029421 6030445D17RikE9Q8F9 148 aa13,56□□□□□ -0,24
Ptx3-201ENSMUST00000029421 Vps13dB1ART2 4390 aa13,53□□□□□ -0,24
Ptx3-201ENSMUST00000029421 1600014C23RikQ9DAX4 101 aa13,49□□□□□ -0,25
Ptx3-201ENSMUST00000029421 Chtf8P0CG14 533 aa13,48□□□□□ -0,25
Ptx3-201ENSMUST00000029421 Gpr15lA0A0B4J1N3 78 aa13,47□□□□□ -0,25
Ptx3-201ENSMUST00000029421 Dnah2P0C6F1 4456 aa13,46□□□□□ -0,26
Ptx3-201ENSMUST00000029421 NbdyA0A0N4SUI7 68 aa13,45□□□□□ -0,26
Ptx3-201ENSMUST00000029421 Znf706Q9D115 76 aaKnown RBP13,44□□□□□ -0,26
Ptx3-201ENSMUST00000029421 Dnah5Q8VHE6 4621 aa13,43□□□□□ -0,26
Ptx3-201ENSMUST00000029421 Gm28374F6SG70 93 aa13,42□□□□□ -0,26
Ptx3-201ENSMUST00000029421 Gm10642Q3TWM1 71 aa13,42□□□□□ -0,26
Ptx3-201ENSMUST00000029421 Adm2Q7TNK8 150 aa13,42□□□□□ -0,26
Ptx3-201ENSMUST00000029421 Gm10160F6Y577 67 aa13,42□□□□□ -0,26
Ptx3-201ENSMUST00000029421 4933415A04RikQ9D443 101 aa13,42□□□□□ -0,26
Ptx3-201ENSMUST00000029421 Igkv3-3A0A140T8Q0 119 aa13,4□□□□□ -0,26
Ptx3-201ENSMUST00000029421 HrnrQ8VHD8 2496 aa13,36□□□□□ -0,27
Ptx3-201ENSMUST00000029421 Gm10267M0QWD8 85 aa13,36□□□□□ -0,27
Ptx3-201ENSMUST00000029421 Cypt14J3QPF7 87 aa13,33□□□□□ -0,27
Ptx3-201ENSMUST00000029421 Krtap13O88375 197 aa13,33□□□□□ -0,28
Ptx3-201ENSMUST00000029421 Tnp2P11378 117 aa13,33□□□□□ -0,28
Ptx3-201ENSMUST00000029421 Pkd1O08852 4293 aa13,31□□□□□ -0,28
Ptx3-201ENSMUST00000029421 Gm2696A0A1W2P709 240 aa13,3□□□□□ -0,28
Ptx3-201ENSMUST00000029421 Gm10643Q3URG9 111 aa13,3□□□□□ -0,28
Ptx3-201ENSMUST00000029421 Krtap14O08640 167 aa13,29□□□□□ -0,28
Ptx3-201ENSMUST00000029421 Krtap10-10A0A1W2P7T6 217 aa13,29□□□□□ -0,28
Ptx3-201ENSMUST00000029421 Gm16253D3Z167 63 aa13,27□□□□□ -0,28
Ptx3-201ENSMUST00000029421 Ccdc179J3QM76 67 aa13,27□□□□□ -0,28
Ptx3-201ENSMUST00000029421 Ndufb1P0DN34 57 aa13,23□□□□□ -0,29
Ptx3-201ENSMUST00000029421 Wfdc3Q14AE4 130 aa13,19□□□□□ -0,3
Ptx3-201ENSMUST00000029421 Defb39Q70KL3 74 aa13,19□□□□□ -0,3
Ptx3-201ENSMUST00000029421 ApobE9Q414 4505 aa13,18□□□□□ -0,3
Ptx3-201ENSMUST00000029421 Gm20661K7N787 53 aa13,15□□□□□ -0,3
Ptx3-201ENSMUST00000029421 Dync1h1Q9JHU4 4644 aaKnown RBP13,14□□□□□ -0,31
Ptx3-201ENSMUST00000029421 Anapc11Q9CPX9 84 aa13,1□□□□□ -0,31
Ptx3-201ENSMUST00000029421 Ryr3A2AGL3 4863 aa13,07□□□□□ -0,32
Ptx3-201ENSMUST00000029421 Limd2Q8BGB5 128 aa13,07□□□□□ -0,32
Ptx3-201ENSMUST00000029421 Hectd4E9Q2E4 4418 aa13,03□□□□□ -0,32
Ptx3-201ENSMUST00000029421 SptssbQ925E8 76 aa13,03□□□□□ -0,32
Ptx3-201ENSMUST00000029421 Fat1A0A1L1SQU7 4645 aa13,03□□□□□ -0,32
Ptx3-201ENSMUST00000029421 Pkhd1E9PZ36 4059 aa13,01□□□□□ -0,33
Ptx3-201ENSMUST00000029421 Uqcr11Q9CPX8 56 aa12,99□□□□□ -0,33
Ptx3-201ENSMUST00000029421 Stard9Q80TF6 4561 aa12,99□□□□□ -0,33
Ptx3-201ENSMUST00000029421 Defb38Q7TNV7 63 aa12,98□□□□□ -0,33
Ptx3-201ENSMUST00000029421 Lrp1bQ9JI18 4599 aa12,96□□□□□ -0,33
Ptx3-201ENSMUST00000029421 Defb13Q8R2I4 64 aa12,95□□□□□ -0,34
Ptx3-201ENSMUST00000029421 Ryr2E9Q401 4966 aaKnown RBP12,95□□□□□ -0,34
Ptx3-201ENSMUST00000029421 Cypt15B1AXS0 87 aa12,93□□□□□ -0,34
Ptx3-201ENSMUST00000029421 Gm21798J3QNU5 87 aa12,9□□□□□ -0,34
Ptx3-201ENSMUST00000029421 Gm3646F6S692 53 aa12,82□□□□□ -0,36
Ptx3-201ENSMUST00000029421 Sec61gP60060 68 aa12,81□□□□□ -0,36
Ptx3-201ENSMUST00000029421 Gm26620Q9CY65 116 aa12,8□□□□□ -0,36
Ptx3-201ENSMUST00000029421 1700042G07RikB1AUF7 90 aa12,76□□□□□ -0,37
Ptx3-201ENSMUST00000029421 Fat2Q5F226 4351 aa12,76□□□□□ -0,37
Ptx3-201ENSMUST00000029421 Spaca4Q80ZQ0 127 aa12,72□□□□□ -0,37
Ptx3-201ENSMUST00000029421 RetnlbQ99P86 105 aa12,72□□□□□ -0,37
Ptx3-201ENSMUST00000029421 SacsQ9JLC8 4582 aa12,67□□□□□ -0,38
Ptx3-201ENSMUST00000029421 Pkhd1l1Q80ZA4 4249 aa12,66□□□□□ -0,38
Ptx3-201ENSMUST00000029421 Gm10999F6Q4M4 69 aa12,62□□□□□ -0,39
Ptx3-201ENSMUST00000029421 Ryr1E9PZQ0 5035 aa12,59□□□□□ -0,39
Ptx3-201ENSMUST00000029421 9230102O04RikA2ASX7 82 aa12,57□□□□□ -0,4
Ptx3-201ENSMUST00000029421 2310034C09RikQ9D746 214 aa12,56□□□□□ -0,4
Ptx3-201ENSMUST00000029421 Vps13bQ80TY5 3993 aa12,56□□□□□ -0,4
Ptx3-201ENSMUST00000029421 Q8BGJ3 129 aa12,54□□□□□ -0,4
Ptx3-201ENSMUST00000029421 Kmt2cQ8BRH4 4903 aa12,5□□□□□ -0,41
Ptx3-201ENSMUST00000029421 2310079G19RikQ9D6L6 185 aa12,49□□□□□ -0,41
Ptx3-201ENSMUST00000029421 4930507D05RikQ8C9C9 103 aa12,46□□□□□ -0,41
Ptx3-201ENSMUST00000029421 Ndufs5Q99LY9 106 aa12,45□□□□□ -0,42
Ptx3-201ENSMUST00000029421 Krtap19-5O08632 62 aa12,44□□□□□ -0,42
Ptx3-201ENSMUST00000029421 A930033H14RikG5E8X6 103 aa12,44□□□□□ -0,42
Ptx3-201ENSMUST00000029421 Dnah8Q91XQ0 4731 aa12,39□□□□□ -0,43
Ptx3-201ENSMUST00000029421 Rps29P62274 56 aa12,38□□□□□ -0,43
Ptx3-201ENSMUST00000029421 Krtap3-2Q9D638 99 aa12,37□□□□□ -0,43
Ptx3-201ENSMUST00000029421 Krtap3-3Q9D7P0 99 aa12,37□□□□□ -0,43
Ptx3-201ENSMUST00000029421 Lrp1Q91ZX7 4545 aaKnown RBP12,32□□□□□ -0,44
Ptx3-201ENSMUST00000029421 Fat3Q8BNA6 4555 aa12,28□□□□□ -0,44
Ptx3-201ENSMUST00000029421 Pla2g10Q9QXX3 151 aa12,22□□□□□ -0,45
Ptx3-201ENSMUST00000029421 D6Ertd527eA0A0N4SWI3 464 aa12,21□□□□□ -0,45
Ptx3-201ENSMUST00000029421 Defb1P56386 69 aa12,21□□□□□ -0,45
Ptx3-201ENSMUST00000029421 Gm4491E0CX42 125 aa12,18□□□□□ -0,46
Ptx3-201ENSMUST00000029421 Abca13Q5SSE9 5034 aa12,14□□□□□ -0,47
Ptx3-201ENSMUST00000029421 Gm11939A2A592 99 aa12,13□□□□□ -0,47
Ptx3-201ENSMUST00000029421 Gm9821Q8K076 103 aa12,1□□□□□ -0,47
Ptx3-201ENSMUST00000029421 Gm9736A0A1W2P7N1 277 aa12,06□□□□□ -0,48
Ptx3-201ENSMUST00000029421 Dnhd1D3Z2X2 4750 aa12□□□□□ -0,49
Ptx3-201ENSMUST00000029421 Birc6O88738 4882 aa11,97□□□□□ -0,49
Ptx3-201ENSMUST00000029421 Herc2Q4U2R1 4836 aa11,96□□□□□ -0,49
Ptx3-201ENSMUST00000029421 Cox6b2Q80ZN9 88 aa11,92□□□□□ -0,5
Ptx3-201ENSMUST00000029421 Mycbp2Q7TPH6 4711 aa11,92□□□□□ -0,5
Ptx3-201ENSMUST00000029421 Kiaa1109A2AAE1 5005 aa11,91□□□□□ -0,5
Ptx3-201ENSMUST00000029421 Gm5767A0A0J9YTU8 78 aa11,89□□□□□ -0,51
Ptx3-201ENSMUST00000029421 Gm5965D3Z724 196 aa11,83□□□□□ -0,52
Ptx3-201ENSMUST00000029421 Gm20537G3UYK7 97 aa11,74□□□□□ -0,53
Ptx3-201ENSMUST00000029421 HydinQ80W93 5154 aa11,66□□□□□ -0,54
Ptx3-201ENSMUST00000029421 Gm9955Q8CEJ8 102 aa11,66□□□□□ -0,54
Ptx3-201ENSMUST00000029421 Krtap15-1Q9QZU5 150 aa11,61□□□□□ -0,55
Ptx3-201ENSMUST00000029421 Rpl37Q9D823 97 aa11,57□□□□□ -0,56
Ptx3-201ENSMUST00000029421 Gm3880A0A1B0GSB3 72 aa11,57□□□□□ -0,56
Ptx3-201ENSMUST00000029421 Gm12216A0A1W2P827 62 aa11,55□□□□□ -0,56
Ptx3-201ENSMUST00000029421 Gm17606F6ZL36 78 aa11,54□□□□□ -0,56
Retrieved 100 of 22,080 RNA–protein pairs in 61,3 ms