RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 NischQ80TM9 1593 aa45.11■■■■■ 4.81
Ptx3-201ENSMUST00000029421 Gm35339A0A140LHH9 1649 aa44.95■■■■■ 4.79
Ptx3-201ENSMUST00000029421 Abcc9P70170 1546 aa43.8■■■■■ 4.6
Ptx3-201ENSMUST00000029421 Abcc8B2RUS7 1588 aa43.16■■■■■ 4.5
Ptx3-201ENSMUST00000029421 ScribQ80U72 1612 aa40.71■■■■■ 4.11
Ptx3-201ENSMUST00000029421 Rhox8Q6VSS7 320 aa40.59■■■■■ 4.09
Ptx3-201ENSMUST00000029421 Dcaf1Q80TR8 1506 aa40.15■■■■■ 4.02
Ptx3-201ENSMUST00000029421 Kdm5dQ62240 1548 aa39.73■■■■□ 3.95
Ptx3-201ENSMUST00000029421 NacadQ5SWP3 1504 aa39.59■■■■□ 3.93
Ptx3-201ENSMUST00000029421 Rtl1Q7M732 1744 aa39.46■■■■□ 3.91
Ptx3-201ENSMUST00000029421 Rb1cc1Q9ESK9 1588 aa39.44■■■■□ 3.9
Ptx3-201ENSMUST00000029421 Ccdc180J3QNE4 1664 aa39.11■■■■□ 3.85
Ptx3-201ENSMUST00000029421 Baz1aO88379 1555 aa38.99■■■■□ 3.83
Ptx3-201ENSMUST00000029421 Sycp2Q9CUU3 1500 aa38.76■■■■□ 3.8
Ptx3-201ENSMUST00000029421 Crybg2B7ZCC2 1516 aa38.56■■■■□ 3.76
Ptx3-201ENSMUST00000029421 Zcchc6Q5BLK4 1491 aaKnown RBP38.2■■■■□ 3.71
Ptx3-201ENSMUST00000029421 Smarca2Q6DIC0 1577 aa38.02■■■■□ 3.68
Ptx3-201ENSMUST00000029421 BicraF8VPZ9 1578 aa38■■■■□ 3.67
Ptx3-201ENSMUST00000029421 Ccdc136Q3TVA9 1136 aa37.77■■■■□ 3.64
Ptx3-201ENSMUST00000029421 Cecr2E9Q2Z1 1453 aa37.33■■■■□ 3.57
Ptx3-201ENSMUST00000029421 Trim41Q5NCC3 630 aa37.18■■■■□ 3.54
Ptx3-201ENSMUST00000029421 Rpgrip1Q9EPQ2 1331 aa37.15■■■■□ 3.54
Ptx3-201ENSMUST00000029421 Brd4Q9ESU6 1400 aaKnown RBP37.03■■■■□ 3.52
Ptx3-201ENSMUST00000029421 Smarca4Q3TKT4 1613 aaKnown RBP36.86■■■■□ 3.49
Ptx3-201ENSMUST00000029421 Synj1Q8CHC4 1574 aa36.83■■■■□ 3.49
Ptx3-201ENSMUST00000029421 CftrP26361 1476 aa36.72■■■■□ 3.47
Ptx3-201ENSMUST00000029421 HrcG5E8J6 738 aa36.7■■■■□ 3.47
Ptx3-201ENSMUST00000029421 Cttnbp2B9EJA2 1648 aa36.59■■■■□ 3.45
Ptx3-201ENSMUST00000029421 Pds5bQ4VA53 1446 aaKnown RBP36.55■■■■□ 3.44
Ptx3-201ENSMUST00000029421 Atad2bE9Q166 1460 aaKnown RBP36.54■■■■□ 3.44
Ptx3-201ENSMUST00000029421 Iqgap2Q3UQ44 1575 aa36.46■■■■□ 3.43
Ptx3-201ENSMUST00000029421 Golga3P55937 1487 aa36.32■■■■□ 3.4
Ptx3-201ENSMUST00000029421 Cngb1E1AZ71 1325 aa36.22■■■■□ 3.39
Ptx3-201ENSMUST00000029421 Esf1Q3V1V3 845 aaKnown RBP36.21■■■■□ 3.39
Ptx3-201ENSMUST00000029421 Top2bQ64511 1612 aa36.07■■■■□ 3.37
Ptx3-201ENSMUST00000029421 Acin1Q9JIX8 1338 aaKnown RBP36.02■■■■□ 3.36
Ptx3-201ENSMUST00000029421 Cep164Q5DU05 1446 aa35.94■■■■□ 3.34
Ptx3-201ENSMUST00000029421 Wdr62Q3U3T8 1523 aa35.89■■■■□ 3.34
Ptx3-201ENSMUST00000029421 Rsf1E9PWW9 1441 aaKnown RBP35.89■■■■□ 3.34
Ptx3-201ENSMUST00000029421 Frmpd1A2AKB4 1549 aa35.87■■■■□ 3.33
Ptx3-201ENSMUST00000029421 Ercc6F8VPZ5 1481 aa35.82■■■■□ 3.32
Ptx3-201ENSMUST00000029421 Ccdc88bQ4QRL3 1481 aa35.81■■■■□ 3.32
Ptx3-201ENSMUST00000029421 Chic1Q8CBW7 227 aa35.8■■■■□ 3.32
Ptx3-201ENSMUST00000029421 Cc2d2aQ8CFW7 1633 aa35.68■■■■□ 3.3
Ptx3-201ENSMUST00000029421 Thoc2B1AZI6 1594 aaKnown RBP35.66■■■■□ 3.3
Ptx3-201ENSMUST00000029421 Fmn1Q05860 1466 aa35.57■■■■□ 3.28
Ptx3-201ENSMUST00000029421 Unc13aQ4KUS2 1712 aa35.45■■■■□ 3.27
Ptx3-201ENSMUST00000029421 TnnQ80Z71 1560 aa35.34■■■■□ 3.25
Ptx3-201ENSMUST00000029421 Phldb1Q6PDH0 1371 aaKnown RBP35.28■■■■□ 3.24
Ptx3-201ENSMUST00000029421 Lamc3Q9R0B6 1581 aa35.26■■■■□ 3.24
Ptx3-201ENSMUST00000029421 Top2aQ01320 1528 aaKnown RBP35.23■■■■□ 3.23
Ptx3-201ENSMUST00000029421 Gab3Q8BSM5 595 aa35.2■■■■□ 3.23
Ptx3-201ENSMUST00000029421 Fam135aQ6NS59 1506 aa35.16■■■■□ 3.22
Ptx3-201ENSMUST00000029421 Kif15Q6P9L6 1387 aa35.12■■■■□ 3.21
Ptx3-201ENSMUST00000029421 Ubl4bQ9CQ84 188 aa34.94■■■■□ 3.18
Ptx3-201ENSMUST00000029421 Ehmt2Q9Z148 1263 aaKnown RBP34.9■■■■□ 3.18
Ptx3-201ENSMUST00000029421 Rapgef2Q8CHG7 1496 aa34.85■■■■□ 3.17
Ptx3-201ENSMUST00000029421 Camsap1A2AHC3 1581 aa34.82■■■■□ 3.16
Ptx3-201ENSMUST00000029421 Dnajc5bQ9CQ94 199 aa34.75■■■■□ 3.15
Ptx3-201ENSMUST00000029421 Cux2P70298 1426 aa34.74■■■■□ 3.15
Ptx3-201ENSMUST00000029421 Ccdc18Q640L5 1455 aa34.71■■■■□ 3.15
Ptx3-201ENSMUST00000029421 Il27Q8K3I6 234 aa34.68■■■■□ 3.14
Ptx3-201ENSMUST00000029421 Baz1bQ9Z277 1479 aa34.65■■■■□ 3.14
Ptx3-201ENSMUST00000029421 Cep162Q6ZQ06 1403 aa34.56■■■■□ 3.12
Ptx3-201ENSMUST00000029421 Grin2bQ01097 1482 aa34.5■■■■□ 3.11
Ptx3-201ENSMUST00000029421 NrkQ9R0G8 1455 aa34.5■■■■□ 3.11
Ptx3-201ENSMUST00000029421 PtprkP35822 1457 aa34.49■■■■□ 3.11
Ptx3-201ENSMUST00000029421 Npm1Q61937 292 aaKnown RBP34.49■■■■□ 3.11
Ptx3-201ENSMUST00000029421 Pcgf6Q99NA9 353 aa34.49■■■■□ 3.11
Ptx3-201ENSMUST00000029421 Npm2Q80W85 207 aa34.48■■■■□ 3.11
Ptx3-201ENSMUST00000029421 Eif4g1Q6NZJ6 1600 aaKnown RBP34.45■■■■□ 3.1
Ptx3-201ENSMUST00000029421 Shroom4Q1W617 1475 aa34.43■■■■□ 3.1
Ptx3-201ENSMUST00000029421 Mrc2Q64449 1479 aa34.37■■■■□ 3.09
Ptx3-201ENSMUST00000029421 LrpprcQ6PB66 1392 aaKnown RBP34.33■■■■□ 3.09
Ptx3-201ENSMUST00000029421 Arhgap35Q91YM2 1499 aa34.27■■■■□ 3.08
Ptx3-201ENSMUST00000029421 PogzQ8BZH4 1409 aaKnown RBP34.25■■■■□ 3.07
Ptx3-201ENSMUST00000029421 Myt1lP97500 1187 aa34.22■■■■□ 3.07
Ptx3-201ENSMUST00000029421 Efcab5A0JP43 1406 aa34.18■■■■□ 3.06
Ptx3-201ENSMUST00000029421 Duox2A2AQ99 1517 aa34.15■■■■□ 3.06
Ptx3-201ENSMUST00000029421 Dhx29Q6PGC1 1365 aaKnown RBP34.13■■■■□ 3.05
Ptx3-201ENSMUST00000029421 Kif21aQ9QXL2 1672 aa34.11■■■■□ 3.05
Ptx3-201ENSMUST00000029421 Map3k1P53349 1493 aa34.1■■■■□ 3.05
Ptx3-201ENSMUST00000029421 Mroh2bQ7M6Y6 1581 aa34.06■■■■□ 3.04
Ptx3-201ENSMUST00000029421 Crocc2F6XLV1 1638 aa33.95■■■■□ 3.03
Ptx3-201ENSMUST00000029421 NefmP08553 848 aa33.93■■■■□ 3.02
Ptx3-201ENSMUST00000029421 Zeb1Q64318 1117 aa33.93■■■■□ 3.02
Ptx3-201ENSMUST00000029421 Samd9lQ69Z37 1561 aa33.9■■■■□ 3.02
Ptx3-201ENSMUST00000029421 Clip1Q922J3 1391 aa33.89■■■■□ 3.02
Ptx3-201ENSMUST00000029421 AqrQ8CFQ3 1481 aaKnown RBP33.87■■■■□ 3.01
Ptx3-201ENSMUST00000029421 SynmQ70IV5 1561 aa33.77■■■■□ 3
Ptx3-201ENSMUST00000029421 Carmil1Q6EDY6 1374 aa33.73■■■□□ 2.99
Ptx3-201ENSMUST00000029421 Eea1Q8BL66 1411 aa33.72■■■□□ 2.99
Ptx3-201ENSMUST00000029421 Supt5hO55201 1082 aaKnown RBP33.71■■■□□ 2.99
Ptx3-201ENSMUST00000029421 Plb1Q3TTY0 1478 aa33.71■■■□□ 2.99
Ptx3-201ENSMUST00000029421 Rad54l2Q99NG0 1466 aa33.69■■■□□ 2.98
Ptx3-201ENSMUST00000029421 Urb2E9Q7L1 1524 aaKnown RBP33.66■■■□□ 2.98
Ptx3-201ENSMUST00000029421 Setd5Q5XJV7 1441 aa33.63■■■□□ 2.97
Ptx3-201ENSMUST00000029421 Arap1Q4LDD4 1452 aa33.6■■■□□ 2.97
Ptx3-201ENSMUST00000029421 Ankrd26Q811D2 1581 aa33.6■■■□□ 2.97
Ptx3-201ENSMUST00000029421 Erich3F6QRE9 1637 aa33.55■■■□□ 2.96
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms