RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 4933415A04RikQ9D443 101 aa11.23□□□□□ -0.61
Shkbp1-201ENSMUST00000003857 Gm16253D3Z167 63 aa11.22□□□□□ -0.61
Shkbp1-201ENSMUST00000003857 Gm28374F6SG70 93 aa11.22□□□□□ -0.61
Shkbp1-201ENSMUST00000003857 Adm2Q7TNK8 150 aa11.22□□□□□ -0.61
Shkbp1-201ENSMUST00000003857 Sox16Q62247 57 aa11.2□□□□□ -0.62
Shkbp1-201ENSMUST00000003857 Anapc11Q9CPX9 84 aa11.2□□□□□ -0.62
Shkbp1-201ENSMUST00000003857 Gm9918Q8BUR5 174 aa11.18□□□□□ -0.62
Shkbp1-201ENSMUST00000003857 Pkd1l1Q8R526 2615 aa11.18□□□□□ -0.62
Shkbp1-201ENSMUST00000003857 Defb39Q70KL3 74 aa11.15□□□□□ -0.62
Shkbp1-201ENSMUST00000003857 Defb38Q7TNV7 63 aa11.14□□□□□ -0.63
Shkbp1-201ENSMUST00000003857 Tnp2P11378 117 aa11.14□□□□□ -0.63
Shkbp1-201ENSMUST00000003857 1600014C23RikQ9DAX4 101 aa11.11□□□□□ -0.63
Shkbp1-201ENSMUST00000003857 Gpr15lA0A0B4J1N3 78 aa11.1□□□□□ -0.63
Shkbp1-201ENSMUST00000003857 Ccdc179J3QM76 67 aa11.08□□□□□ -0.64
Shkbp1-201ENSMUST00000003857 Krtap14O08640 167 aa11.08□□□□□ -0.64
Shkbp1-201ENSMUST00000003857 Gm20661K7N787 53 aa11.06□□□□□ -0.64
Shkbp1-201ENSMUST00000003857 Dnah7cA0A087WR13 4024 aa11.06□□□□□ -0.64
Shkbp1-201ENSMUST00000003857 Dnah5Q8VHE6 4621 aa11.05□□□□□ -0.64
Shkbp1-201ENSMUST00000003857 Hectd4E9Q2E4 4418 aa11.02□□□□□ -0.64
Shkbp1-201ENSMUST00000003857 2310050C09RikG5E8Z3 280 aa11.02□□□□□ -0.65
Shkbp1-201ENSMUST00000003857 Gm10643Q3URG9 111 aa10.98□□□□□ -0.65
Shkbp1-201ENSMUST00000003857 Gm21798J3QNU5 87 aa10.96□□□□□ -0.65
Shkbp1-201ENSMUST00000003857 Cypt15B1AXS0 87 aa10.94□□□□□ -0.66
Shkbp1-201ENSMUST00000003857 Defb13Q8R2I4 64 aa10.94□□□□□ -0.66
Shkbp1-201ENSMUST00000003857 Ly6g6cQ9Z1Q4 126 aa10.92□□□□□ -0.66
Shkbp1-201ENSMUST00000003857 Dnah2P0C6F1 4456 aa10.92□□□□□ -0.66
Shkbp1-201ENSMUST00000003857 SptssbQ925E8 76 aa10.91□□□□□ -0.66
Shkbp1-201ENSMUST00000003857 Ndufb1P0DN34 57 aa10.9□□□□□ -0.66
Shkbp1-201ENSMUST00000003857 Vps13dB1ART2 4390 aa10.89□□□□□ -0.67
Shkbp1-201ENSMUST00000003857 Dnah7aE9Q0T8 4024 aa10.89□□□□□ -0.67
Shkbp1-201ENSMUST00000003857 Krtap10-4Q08EG8 221 aa10.88□□□□□ -0.67
Shkbp1-201ENSMUST00000003857 Spaca4Q80ZQ0 127 aa10.87□□□□□ -0.67
Shkbp1-201ENSMUST00000003857 Defb11Q8R2I7 77 aa10.83□□□□□ -0.68
Shkbp1-201ENSMUST00000003857 Pkd1O08852 4293 aa10.83□□□□□ -0.68
Shkbp1-201ENSMUST00000003857 ApobE9Q414 4505 aa10.81□□□□□ -0.68
Shkbp1-201ENSMUST00000003857 Krtap13O88375 197 aa10.79□□□□□ -0.68
Shkbp1-201ENSMUST00000003857 Limd2Q8BGB5 128 aa10.79□□□□□ -0.68
Shkbp1-201ENSMUST00000003857 Stard9Q80TF6 4561 aa10.78□□□□□ -0.68
Shkbp1-201ENSMUST00000003857 Uqcr11Q9CPX8 56 aa10.77□□□□□ -0.68
Shkbp1-201ENSMUST00000003857 Gm3646F6S692 53 aa10.76□□□□□ -0.69
Shkbp1-201ENSMUST00000003857 FcgbpE9Q0B5 2583 aa10.74□□□□□ -0.69
Shkbp1-201ENSMUST00000003857 Wfdc3Q14AE4 130 aa10.73□□□□□ -0.69
Shkbp1-201ENSMUST00000003857 Lrp1bQ9JI18 4599 aa10.71□□□□□ -0.7
Shkbp1-201ENSMUST00000003857 Gm10999F6Q4M4 69 aa10.7□□□□□ -0.7
Shkbp1-201ENSMUST00000003857 Gm26620Q9CY65 116 aa10.63□□□□□ -0.71
Shkbp1-201ENSMUST00000003857 Q8BGJ3 129 aa10.62□□□□□ -0.71
Shkbp1-201ENSMUST00000003857 2310034C09RikQ9D746 214 aa10.62□□□□□ -0.71
Shkbp1-201ENSMUST00000003857 1700042G07RikB1AUF7 90 aa10.61□□□□□ -0.71
Shkbp1-201ENSMUST00000003857 2310079G19RikQ9D6L6 185 aa10.6□□□□□ -0.71
Shkbp1-201ENSMUST00000003857 Pkhd1E9PZ36 4059 aa10.59□□□□□ -0.71
Shkbp1-201ENSMUST00000003857 Krtap10-10A0A1W2P7T6 217 aa10.57□□□□□ -0.72
Shkbp1-201ENSMUST00000003857 9230102O04RikA2ASX7 82 aa10.57□□□□□ -0.72
Shkbp1-201ENSMUST00000003857 Krtap3-2Q9D638 99 aa10.57□□□□□ -0.72
Shkbp1-201ENSMUST00000003857 Krtap3-3Q9D7P0 99 aa10.57□□□□□ -0.72
Shkbp1-201ENSMUST00000003857 Sec61gP60060 68 aa10.55□□□□□ -0.72
Shkbp1-201ENSMUST00000003857 Gm2696A0A1W2P709 240 aa10.51□□□□□ -0.73
Shkbp1-201ENSMUST00000003857 A930033H14RikG5E8X6 103 aa10.49□□□□□ -0.73
Shkbp1-201ENSMUST00000003857 Defb1P56386 69 aa10.47□□□□□ -0.73
Shkbp1-201ENSMUST00000003857 Fat2Q5F226 4351 aa10.44□□□□□ -0.74
Shkbp1-201ENSMUST00000003857 Ndufs5Q99LY9 106 aa10.42□□□□□ -0.74
Shkbp1-201ENSMUST00000003857 SacsQ9JLC8 4582 aa10.41□□□□□ -0.74
Shkbp1-201ENSMUST00000003857 4930507D05RikQ8C9C9 103 aa10.4□□□□□ -0.74
Shkbp1-201ENSMUST00000003857 D6Ertd527eA0A0N4SWI3 464 aa10.36□□□□□ -0.75
Shkbp1-201ENSMUST00000003857 Fat1A0A1L1SQU7 4645 aa10.35□□□□□ -0.75
Shkbp1-201ENSMUST00000003857 Rps29P62274 56 aa10.34□□□□□ -0.75
Shkbp1-201ENSMUST00000003857 Gm4491E0CX42 125 aa10.33□□□□□ -0.76
Shkbp1-201ENSMUST00000003857 OxtP35454 125 aa10.32□□□□□ -0.76
Shkbp1-201ENSMUST00000003857 Dync1h1Q9JHU4 4644 aaKnown RBP10.32□□□□□ -0.76
Shkbp1-201ENSMUST00000003857 Gm11939A2A592 99 aa10.29□□□□□ -0.76
Shkbp1-201ENSMUST00000003857 RetnlbQ99P86 105 aa10.23□□□□□ -0.77
Shkbp1-201ENSMUST00000003857 Gm9821Q8K076 103 aa10.14□□□□□ -0.79
Shkbp1-201ENSMUST00000003857 Vps13bQ80TY5 3993 aa10.12□□□□□ -0.79
Shkbp1-201ENSMUST00000003857 Pkhd1l1Q80ZA4 4249 aa10.11□□□□□ -0.79
Shkbp1-201ENSMUST00000003857 Pla2g10Q9QXX3 151 aa10.09□□□□□ -0.79
Shkbp1-201ENSMUST00000003857 Cox6b2Q80ZN9 88 aa10.04□□□□□ -0.8
Shkbp1-201ENSMUST00000003857 Ryr3A2AGL3 4863 aa10.01□□□□□ -0.81
Shkbp1-201ENSMUST00000003857 Gm5767A0A0J9YTU8 78 aa9.96□□□□□ -0.82
Shkbp1-201ENSMUST00000003857 Gm20537G3UYK7 97 aa9.95□□□□□ -0.82
Shkbp1-201ENSMUST00000003857 Lrp1Q91ZX7 4545 aaKnown RBP9.92□□□□□ -0.82
Shkbp1-201ENSMUST00000003857 Gm3880A0A1B0GSB3 72 aa9.8□□□□□ -0.84
Shkbp1-201ENSMUST00000003857 Krtap19-5O08632 62 aa9.78□□□□□ -0.84
Shkbp1-201ENSMUST00000003857 Kmt2cQ8BRH4 4903 aa9.77□□□□□ -0.85
Shkbp1-201ENSMUST00000003857 Gm9736A0A1W2P7N1 277 aa9.72□□□□□ -0.85
Shkbp1-201ENSMUST00000003857 Ryr2E9Q401 4966 aaKnown RBP9.71□□□□□ -0.85
Shkbp1-201ENSMUST00000003857 Gm9955Q8CEJ8 102 aa9.71□□□□□ -0.85
Shkbp1-201ENSMUST00000003857 Fat3Q8BNA6 4555 aa9.7□□□□□ -0.86
Shkbp1-201ENSMUST00000003857 Rnase13Q5GAM7 153 aa9.7□□□□□ -0.86
Shkbp1-201ENSMUST00000003857 Gm10382Q3V0T5 144 aa9.69□□□□□ -0.86
Shkbp1-201ENSMUST00000003857 Rpl37Q9D823 97 aa9.67□□□□□ -0.86
Shkbp1-201ENSMUST00000003857 Gm5965D3Z724 196 aa9.64□□□□□ -0.87
Shkbp1-201ENSMUST00000003857 Krtap15-1Q9QZU5 150 aa9.64□□□□□ -0.87
Shkbp1-201ENSMUST00000003857 Gm17606F6ZL36 78 aa9.64□□□□□ -0.87
Shkbp1-201ENSMUST00000003857 Mycbp2Q7TPH6 4711 aa9.58□□□□□ -0.88
Shkbp1-201ENSMUST00000003857 Gm12216A0A1W2P827 62 aa9.57□□□□□ -0.88
Shkbp1-201ENSMUST00000003857 Gm17416Q30KP4 66 aa9.53□□□□□ -0.88
Shkbp1-201ENSMUST00000003857 Dnah8Q91XQ0 4731 aa9.51□□□□□ -0.89
Shkbp1-201ENSMUST00000003857 Krtap3-1A2A591 98 aa9.49□□□□□ -0.89
Shkbp1-201ENSMUST00000003857 Abca13Q5SSE9 5034 aa9.48□□□□□ -0.89
Shkbp1-201ENSMUST00000003857 Ryr1E9PZQ0 5035 aa9.47□□□□□ -0.89
Shkbp1-201ENSMUST00000003857 CriptO70333 101 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 101.5 ms