RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Coa6Q8BGD8 79 aa6.3□□□□□ -1.4
Sh3rf1-202ENSMUST00000209611 U90926O08546 118 aa6.3□□□□□ -1.4
Sh3rf1-202ENSMUST00000209611 Igkv8-26A0A075B5N5 123 aa6.29□□□□□ -1.4
Sh3rf1-202ENSMUST00000209611 Igkv3-12A0A140T8P0 119 aa6.29□□□□□ -1.4
Sh3rf1-202ENSMUST00000209611 Gm11627A6PWP4 55 aa6.28□□□□□ -1.4
Sh3rf1-202ENSMUST00000209611 Defb40Q70KL2 73 aa6.27□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Pde6gP09174 87 aa6.27□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 CnbpP53996 178 aaKnown RBP6.27□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Gm5617Q91VN2 117 aa6.27□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Ly6g6cQ9Z1Q4 126 aa6.27□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Igkv3-3A0A140T8Q0 119 aa6.27□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Gm17349F7BGH6 99 aa6.26□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Nupr2Q497P3 102 aa6.26□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 1700012A03RikQ9DAF1 130 aa6.26□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Dnah1E9Q8T7 4250 aa6.26□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 SycnQ8VCK7 134 aa6.26□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Msrb1Q9JLC3 116 aa6.26□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Igkv3-10A0A0G2JGN0 119 aa6.25□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Igkv1-110A0A0B4J1I0 119 aa6.25□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Mp68P56379 58 aa6.25□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 PscaP57096 123 aa6.25□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Cdc42se1Q8BHL7 80 aa6.25□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Dnah10D3YYQ8 4591 aa6.24□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Defb37Q7TMD2 62 aa6.24□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Csmd3Q80T79 3707 aa6.24□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Gm12216A0A1W2P827 62 aa6.24□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 A830005F24RikQ8BRT5 167 aa6.24□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Gm10770F7D043 238 aa6.24□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Pkd1l1Q8R526 2615 aa6.23□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Ighv10-3A0A075B5T6 119 aa6.23□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Elof1P60003 83 aa6.23□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Wfdc13Q5DQQ6 81 aa6.22□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Znf414Q9DCK4 299 aa6.22□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Gm10267M0QWD8 85 aa6.22□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Gm9508A0A1W2P7W0 230 aa6.22□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Dmac1Q9CQ00 111 aa6.21□□□□□ -1.41
Sh3rf1-202ENSMUST00000209611 Gm10643Q3URG9 111 aa6.21□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Fam168bQ80XQ8 194 aa6.21□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Gm10320E9PW43 113 aa6.2□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Fam229bQ8CF36 80 aa6.2□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Q9DAA7 145 aa6.2□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Prol1E9PYQ4 312 aa6.2□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Sprr1aQ62266 144 aa6.18□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Igkv8-27A0A0G2JF28 120 aa6.17□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Igkv8-30A0A140T8M3 121 aa6.17□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 A930002H24RikQ8C8Y3 163 aa6.17□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Dync2h1Q45VK7 4306 aa6.17□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 P84750 121 aa6.17□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Dnah17Q69Z23 4481 aa6.17□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Dnah14A0A140LIJ4 4489 aa6.17□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Gm7276Q3TYW4 209 aa6.17□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Smim29Q8R043 75 aa6.17□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 2310061N02RikQ9D6S9 174 aa6.16□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Gm17689B3GLJ4 109 aa6.15□□□□□ -1.42
Sh3rf1-202ENSMUST00000209611 Stab2Q8R4U0 2559 aa6.15□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Dnah7bL7N1Y0 4068 aa6.14□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Cystm1Q8K353 104 aa6.14□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 FcgbpE9Q0B5 2583 aa6.14□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 VwfQ8CIZ8 2813 aa6.14□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 1700042G07RikB1AUF7 90 aa6.13□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Coa5Q99M07 74 aa6.13□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 TnxbO35452 4006 aa6.13□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Phxr4P15974 95 aa6.13□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Igkv8-21A0A140T8P7 120 aa6.12□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Gm12353A2AGJ4 60 aa6.12□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Gm26620Q9CY65 116 aa6.11□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Sprr2jO70561 109 aa6.11□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Chchd10Q7TNL9 138 aa6.1□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Phf5aP83870 110 aaKnown RBP6.09□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Gm9821Q8K076 103 aa6.09□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Cox6a2P43023 97 aa6.09□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Zcchc13Q9D548 170 aa6.09□□□□□ -1.43
Sh3rf1-202ENSMUST00000209611 Igkv3-7A0A0G2JE31 119 aa6.09□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Plac8Q9JI48 112 aa6.09□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Gm10308Q9CVR5 141 aa6.08□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Ighv2-2A0A075B5P8 116 aa6.08□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Igkv3-5A0A140T8M6 119 aa6.08□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 P01821 116 aa6.08□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Q8K1L6 76 aa6.08□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Fam104aA2A6P4 185 aa6.07□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Pla2g10Q9QXX3 151 aa6.07□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Igkv8-28A0A0G2JE47 121 aa6.06□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Gm20661K7N787 53 aa6.06□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Gm9507D3Z5T3 223 aa6.05□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 OxtP35454 125 aa6.04□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Fras1Q80T14 4010 aa6.03□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Defb9Q8R2I6 67 aa6.03□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Gm20538F6Z9R1 75 aa6.03□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 1600014C23RikQ9DAX4 101 aa6.03□□□□□ -1.44
Sh3rf1-202ENSMUST00000209611 Gm3646F6S692 53 aa6.02□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Adm2Q7TNK8 150 aa6.02□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Gm10160F6Y577 67 aa6.01□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Igkv3-4A0A140T8Q4 119 aa6.01□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 1700018G05RikA0A1B0GSI2 66 aa6.01□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Gm10065F6TJM2 114 aa6□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 A730071L15RikQ8C4X0 137 aa6□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Gm10642Q3TWM1 71 aa6□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 TgO08710 2766 aa5.99□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Mrpl34Q99N91 92 aa5.98□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Gm27235Q3UW50 83 aa5.98□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 115 ms