RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 C530025M09RikF6RGA8 229 aa6.14□□□□□ -1.43
Scn8a-213ENSMUST00000201549 Phxr4P15974 95 aa6.14□□□□□ -1.43
Scn8a-213ENSMUST00000201549 Gm11627A6PWP4 55 aa6.12□□□□□ -1.43
Scn8a-213ENSMUST00000201549 Adgrg4B7ZCC9 3073 aa6.12□□□□□ -1.43
Scn8a-213ENSMUST00000201549 Gm10643Q3URG9 111 aa6.12□□□□□ -1.43
Scn8a-213ENSMUST00000201549 Csmd1Q923L3 3564 aa6.11□□□□□ -1.43
Scn8a-213ENSMUST00000201549 Akap9Q70FJ1 3797 aa6.11□□□□□ -1.43
Scn8a-213ENSMUST00000201549 Usp9yF8VPU6 2556 aa6.1□□□□□ -1.43
Scn8a-213ENSMUST00000201549 Q8BT88 171 aa6.09□□□□□ -1.43
Scn8a-213ENSMUST00000201549 AY074887Q8R5F9 132 aa6.09□□□□□ -1.43
Scn8a-213ENSMUST00000201549 Fam229bQ8CF36 80 aa6.09□□□□□ -1.44
Scn8a-213ENSMUST00000201549 RelnQ60841 3461 aa6.08□□□□□ -1.44
Scn8a-213ENSMUST00000201549 Psors1c2Q80ZC9 134 aa6.08□□□□□ -1.44
Scn8a-213ENSMUST00000201549 A330070K13RikQ8CA53 115 aa6.08□□□□□ -1.44
Scn8a-213ENSMUST00000201549 FlnaQ8BTM8 2647 aaKnown RBP6.07□□□□□ -1.44
Scn8a-213ENSMUST00000201549 Sprr4Q8CGN8 76 aa6.06□□□□□ -1.44
Scn8a-213ENSMUST00000201549 Sprr1bQ62267 153 aa6.06□□□□□ -1.44
Scn8a-213ENSMUST00000201549 Plac8Q9JI48 112 aa6.06□□□□□ -1.44
Scn8a-213ENSMUST00000201549 HrnrQ8VHD8 2496 aa6.04□□□□□ -1.44
Scn8a-213ENSMUST00000201549 SpenQ62504 3644 aaKnown RBP6.03□□□□□ -1.44
Scn8a-213ENSMUST00000201549 Gm7276Q3TYW4 209 aa6.03□□□□□ -1.44
Scn8a-213ENSMUST00000201549 Myo15bI7HPW8 3033 aa6.01□□□□□ -1.45
Scn8a-213ENSMUST00000201549 Gm7137J3QMW1 236 aa6.01□□□□□ -1.45
Scn8a-213ENSMUST00000201549 Ankrd11E9Q4F7 2643 aa6□□□□□ -1.45
Scn8a-213ENSMUST00000201549 DspE9Q557 2883 aaKnown RBP5.99□□□□□ -1.45
Scn8a-213ENSMUST00000201549 Nsd1O88491 2588 aaKnown RBP5.99□□□□□ -1.45
Scn8a-213ENSMUST00000201549 Smim29Q8R043 75 aa5.99□□□□□ -1.45
Scn8a-213ENSMUST00000201549 Gm7138L7N2C3 230 aa5.99□□□□□ -1.45
Scn8a-213ENSMUST00000201549 Gm3238W4VSP7 230 aa5.99□□□□□ -1.45
Scn8a-213ENSMUST00000201549 Usp24B1AY13 2617 aaKnown RBP5.99□□□□□ -1.45
Scn8a-213ENSMUST00000201549 Chd6A3KFM7 2711 aa5.98□□□□□ -1.45
Scn8a-213ENSMUST00000201549 Itpr1P11881 2749 aa5.98□□□□□ -1.45
Scn8a-213ENSMUST00000201549 Uqcr11Q9CPX8 56 aa5.98□□□□□ -1.45
Scn8a-213ENSMUST00000201549 Gm10320E9PW43 113 aa5.97□□□□□ -1.45
Scn8a-213ENSMUST00000201549 CnbpP53996 178 aaKnown RBP5.97□□□□□ -1.45
Scn8a-213ENSMUST00000201549 Cystm1Q8K353 104 aa5.96□□□□□ -1.45
Scn8a-213ENSMUST00000201549 CicQ924A2 2510 aa5.96□□□□□ -1.46
Scn8a-213ENSMUST00000201549 Defb9Q8R2I6 67 aa5.96□□□□□ -1.46
Scn8a-213ENSMUST00000201549 Gm9508A0A1W2P7W0 230 aa5.96□□□□□ -1.46
Scn8a-213ENSMUST00000201549 Gm884A2A9H6 3643 aa5.95□□□□□ -1.46
Scn8a-213ENSMUST00000201549 Krtap15-1Q9QZU5 150 aa5.95□□□□□ -1.46
Scn8a-213ENSMUST00000201549 AW011738F6S7Q2 159 aa5.95□□□□□ -1.46
Scn8a-213ENSMUST00000201549 Zfhx4Q9JJN2 3550 aa5.94□□□□□ -1.46
Scn8a-213ENSMUST00000201549 Fam229aB2KGE5 128 aa5.94□□□□□ -1.46
Scn8a-213ENSMUST00000201549 Zzef1Q5SSH7 2924 aa5.94□□□□□ -1.46
Scn8a-213ENSMUST00000201549 Cypt15B1AXS0 87 aa5.93□□□□□ -1.46
Scn8a-213ENSMUST00000201549 Camk2n1Q6QWF9 78 aa5.93□□□□□ -1.46
Scn8a-213ENSMUST00000201549 Smg1Q8BKX6 3658 aaKnown RBP5.92□□□□□ -1.46
Scn8a-213ENSMUST00000201549 Hectd1Q69ZR2 2618 aaKnown RBP5.91□□□□□ -1.46
Scn8a-213ENSMUST00000201549 NbeaQ9EPN1 2936 aa5.91□□□□□ -1.46
Scn8a-213ENSMUST00000201549 Gm4491E0CX42 125 aa5.9□□□□□ -1.47
Scn8a-213ENSMUST00000201549 Utp20Q5XG71 2788 aaKnown RBP5.88□□□□□ -1.47
Scn8a-213ENSMUST00000201549 Gm26620Q9CY65 116 aa5.88□□□□□ -1.47
Scn8a-213ENSMUST00000201549 NipblQ6KCD5 2798 aaKnown RBP5.87□□□□□ -1.47
Scn8a-213ENSMUST00000201549 Notch1Q01705 2531 aa5.87□□□□□ -1.47
Scn8a-213ENSMUST00000201549 AtrQ9JKK8 2635 aa5.87□□□□□ -1.47
Scn8a-213ENSMUST00000201549 2310034C09RikQ9D746 214 aa5.87□□□□□ -1.47
Scn8a-213ENSMUST00000201549 Gm21798J3QNU5 87 aa5.86□□□□□ -1.47
Scn8a-213ENSMUST00000201549 Gm3646F6S692 53 aa5.86□□□□□ -1.47
Scn8a-213ENSMUST00000201549 Kmt2bO08550 2713 aa5.86□□□□□ -1.47
Scn8a-213ENSMUST00000201549 Itpr3P70227 2670 aa5.85□□□□□ -1.47
Scn8a-213ENSMUST00000201549 Ndufaf8A2AMZ4 74 aa5.84□□□□□ -1.47
Scn8a-213ENSMUST00000201549 Trank1Q8BV79 2999 aa5.84□□□□□ -1.47
Scn8a-213ENSMUST00000201549 Gm11565A2A4M7 156 aa5.84□□□□□ -1.47
Scn8a-213ENSMUST00000201549 Sec61bQ9CQS8 96 aaKnown RBP5.83□□□□□ -1.48
Scn8a-213ENSMUST00000201549 Fam104aA2A6P4 185 aa5.82□□□□□ -1.48
Scn8a-213ENSMUST00000201549 Fn1P11276 2477 aaKnown RBP5.81□□□□□ -1.48
Scn8a-213ENSMUST00000201549 Cypt14J3QPF7 87 aa5.8□□□□□ -1.48
Scn8a-213ENSMUST00000201549 Ubr5Q80TP3 2792 aa5.79□□□□□ -1.48
Scn8a-213ENSMUST00000201549 A730071L15RikQ8C4X0 137 aa5.79□□□□□ -1.48
Scn8a-213ENSMUST00000201549 Zcchc13Q9D548 170 aa5.78□□□□□ -1.48
Scn8a-213ENSMUST00000201549 Akap13E9Q394 2776 aa5.77□□□□□ -1.49
Scn8a-213ENSMUST00000201549 6030445D17RikE9Q8F9 148 aa5.77□□□□□ -1.49
Scn8a-213ENSMUST00000201549 Lama5Q61001 3718 aa5.77□□□□□ -1.49
Scn8a-213ENSMUST00000201549 Gm9112A2AI92 75 aa5.77□□□□□ -1.49
Scn8a-213ENSMUST00000201549 FlnbQ80X90 2602 aaKnown RBP5.76□□□□□ -1.49
Scn8a-213ENSMUST00000201549 Muc2Q80Z19 2680 aa5.76□□□□□ -1.49
Scn8a-213ENSMUST00000201549 Gm9955Q8CEJ8 102 aa5.76□□□□□ -1.49
Scn8a-213ENSMUST00000201549 Cmya5Q70KF4 3739 aa5.75□□□□□ -1.49
Scn8a-213ENSMUST00000201549 1700042G07RikB1AUF7 90 aa5.74□□□□□ -1.49
Scn8a-213ENSMUST00000201549 Stab1Q8R4Y4 2571 aa5.73□□□□□ -1.49
Scn8a-213ENSMUST00000201549 Igfn1Q3KNY0 2849 aa5.73□□□□□ -1.49
Scn8a-213ENSMUST00000201549 Muc5acE9QAQ8 3455 aa5.73□□□□□ -1.49
Scn8a-213ENSMUST00000201549 FasnP19096 2504 aaKnown RBP5.71□□□□□ -1.49
Scn8a-213ENSMUST00000201549 Gm36176A0A1W2P8D5 158 aa5.71□□□□□ -1.5
Scn8a-213ENSMUST00000201549 Gm21887J3QQ04 176 aa5.71□□□□□ -1.5
Scn8a-213ENSMUST00000201549 Prm2P07978 107 aa5.69□□□□□ -1.5
Scn8a-213ENSMUST00000201549 Celsr2Q9R0M0 2920 aa5.68□□□□□ -1.5
Scn8a-213ENSMUST00000201549 Chd9Q8BYH8 2885 aa5.67□□□□□ -1.5
Scn8a-213ENSMUST00000201549 SmcpP15265 143 aa5.67□□□□□ -1.5
Scn8a-213ENSMUST00000201549 Sprr1aQ62266 144 aa5.67□□□□□ -1.5
Scn8a-213ENSMUST00000201549 Odf3bQ5M8M2 238 aa5.66□□□□□ -1.5
Scn8a-213ENSMUST00000201549 Romo1P60603 79 aa5.65□□□□□ -1.5
Scn8a-213ENSMUST00000201549 Gm10139O88245 57 aa5.65□□□□□ -1.51
Scn8a-213ENSMUST00000201549 ApcQ61315 2845 aa5.65□□□□□ -1.51
Scn8a-213ENSMUST00000201549 Gm17349F7BGH6 99 aa5.64□□□□□ -1.51
Scn8a-213ENSMUST00000201549 Gm19426M0QWC7 77 aa5.62□□□□□ -1.51
Scn8a-213ENSMUST00000201549 Mast4Q811L6 2618 aa5.62□□□□□ -1.51
Scn8a-213ENSMUST00000201549 Nbeal2Q6ZQA0 2742 aa5.62□□□□□ -1.51
Scn8a-213ENSMUST00000201549 Svep1A2AVA0 3567 aa5.62□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 57.1 ms