RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 Lama3Q61789 3330 aa6.61□□□□□ -1.35
Col6a5-203ENSMUST00000190193 Pkd1l1Q8R526 2615 aa6.61□□□□□ -1.35
Col6a5-203ENSMUST00000190193 Krtap24-1G3X9A2 248 aa6.61□□□□□ -1.35
Col6a5-203ENSMUST00000190193 Spata3Q9D9T6 193 aa6.6□□□□□ -1.35
Col6a5-203ENSMUST00000190193 Gm21798J3QNU5 87 aa6.6□□□□□ -1.35
Col6a5-203ENSMUST00000190193 Tex15F8VPN2 2785 aa6.6□□□□□ -1.35
Col6a5-203ENSMUST00000190193 Fam229bQ8CF36 80 aa6.59□□□□□ -1.36
Col6a5-203ENSMUST00000190193 Stab2Q8R4U0 2559 aa6.58□□□□□ -1.36
Col6a5-203ENSMUST00000190193 C530025M09RikF6RGA8 229 aa6.56□□□□□ -1.36
Col6a5-203ENSMUST00000190193 Mki67E9PVX6 3177 aaKnown RBP6.56□□□□□ -1.36
Col6a5-203ENSMUST00000190193 AtmQ62388 3066 aa6.55□□□□□ -1.36
Col6a5-203ENSMUST00000190193 Defb11Q8R2I7 77 aa6.55□□□□□ -1.36
Col6a5-203ENSMUST00000190193 Muc2Q80Z19 2680 aa6.54□□□□□ -1.36
Col6a5-203ENSMUST00000190193 FryE9Q8I9 3020 aa6.54□□□□□ -1.36
Col6a5-203ENSMUST00000190193 2310034C09RikQ9D746 214 aa6.53□□□□□ -1.36
Col6a5-203ENSMUST00000190193 MgaA2AWL7 3003 aaKnown RBP6.53□□□□□ -1.36
Col6a5-203ENSMUST00000190193 Zcchc13Q9D548 170 aa6.53□□□□□ -1.36
Col6a5-203ENSMUST00000190193 Fam104aA2A6P4 185 aa6.52□□□□□ -1.37
Col6a5-203ENSMUST00000190193 Gm9955Q8CEJ8 102 aa6.51□□□□□ -1.37
Col6a5-203ENSMUST00000190193 Zzef1Q5SSH7 2924 aa6.51□□□□□ -1.37
Col6a5-203ENSMUST00000190193 Gm26620Q9CY65 116 aa6.49□□□□□ -1.37
Col6a5-203ENSMUST00000190193 Gm7173A0A0G2JEB6 3132 aa6.48□□□□□ -1.37
Col6a5-203ENSMUST00000190193 Cfap54Q8C6S9 3106 aa6.48□□□□□ -1.37
Col6a5-203ENSMUST00000190193 Smim29Q8R043 75 aa6.47□□□□□ -1.37
Col6a5-203ENSMUST00000190193 Rev3lQ61493 3122 aa6.46□□□□□ -1.38
Col6a5-203ENSMUST00000190193 Pla2g10Q9QXX3 151 aa6.44□□□□□ -1.38
Col6a5-203ENSMUST00000190193 Igfn1Q3KNY0 2849 aa6.43□□□□□ -1.38
Col6a5-203ENSMUST00000190193 6030445D17RikE9Q8F9 148 aa6.43□□□□□ -1.38
Col6a5-203ENSMUST00000190193 Defb9Q8R2I6 67 aa6.42□□□□□ -1.38
Col6a5-203ENSMUST00000190193 Gm3880A0A1B0GSB3 72 aa6.41□□□□□ -1.38
Col6a5-203ENSMUST00000190193 Chd9Q8BYH8 2885 aa6.41□□□□□ -1.38
Col6a5-203ENSMUST00000190193 Gm3646F6S692 53 aa6.4□□□□□ -1.38
Col6a5-203ENSMUST00000190193 Cypt14J3QPF7 87 aa6.4□□□□□ -1.39
Col6a5-203ENSMUST00000190193 1700042G07RikB1AUF7 90 aa6.38□□□□□ -1.39
Col6a5-203ENSMUST00000190193 Cdh23Q99PF4 3354 aa6.37□□□□□ -1.39
Col6a5-203ENSMUST00000190193 Srrm2Q8BTI8 2703 aaKnown RBP6.37□□□□□ -1.39
Col6a5-203ENSMUST00000190193 Cystm1Q8K353 104 aa6.36□□□□□ -1.39
Col6a5-203ENSMUST00000190193 Gm3285A0A1W2P7U0 201 aa6.35□□□□□ -1.39
Col6a5-203ENSMUST00000190193 FlncQ8VHX6 2726 aaKnown RBP6.34□□□□□ -1.39
Col6a5-203ENSMUST00000190193 Col12a1Q60847 3120 aa6.34□□□□□ -1.39
Col6a5-203ENSMUST00000190193 Gm9821Q8K076 103 aa6.33□□□□□ -1.4
Col6a5-203ENSMUST00000190193 Lama1P19137 3084 aa6.33□□□□□ -1.4
Col6a5-203ENSMUST00000190193 Hivep1Q03172 2688 aa6.33□□□□□ -1.4
Col6a5-203ENSMUST00000190193 Gm10065F6TJM2 114 aa6.32□□□□□ -1.4
Col6a5-203ENSMUST00000190193 Plac8Q9JI48 112 aa6.3□□□□□ -1.4
Col6a5-203ENSMUST00000190193 SmcpP15265 143 aa6.29□□□□□ -1.4
Col6a5-203ENSMUST00000190193 Celsr1O35161 3034 aa6.29□□□□□ -1.4
Col6a5-203ENSMUST00000190193 Anapc11Q9CPX9 84 aa6.28□□□□□ -1.4
Col6a5-203ENSMUST00000190193 4933415A04RikQ9D443 101 aa6.28□□□□□ -1.4
Col6a5-203ENSMUST00000190193 Unc80Q8BLN6 3261 aa6.28□□□□□ -1.4
Col6a5-203ENSMUST00000190193 Myo15bI7HPW8 3033 aa6.28□□□□□ -1.4
Col6a5-203ENSMUST00000190193 Celsr3Q91ZI0 3301 aa6.28□□□□□ -1.4
Col6a5-203ENSMUST00000190193 Gm37013Q8K491 104 aa6.28□□□□□ -1.4
Col6a5-203ENSMUST00000190193 NbeaQ9EPN1 2936 aa6.27□□□□□ -1.4
Col6a5-203ENSMUST00000190193 TgO08710 2766 aa6.27□□□□□ -1.41
Col6a5-203ENSMUST00000190193 Gm4491E0CX42 125 aa6.27□□□□□ -1.41
Col6a5-203ENSMUST00000190193 NbdyA0A0N4SUI7 68 aa6.27□□□□□ -1.41
Col6a5-203ENSMUST00000190193 Odf3bQ5M8M2 238 aa6.27□□□□□ -1.41
Col6a5-203ENSMUST00000190193 Nf1Q04690 2841 aa6.26□□□□□ -1.41
Col6a5-203ENSMUST00000190193 Gm10139O88245 57 aa6.25□□□□□ -1.41
Col6a5-203ENSMUST00000190193 Gm10320E9PW43 113 aa6.25□□□□□ -1.41
Col6a5-203ENSMUST00000190193 Akap9Q70FJ1 3797 aa6.24□□□□□ -1.41
Col6a5-203ENSMUST00000190193 Wdfy4E9Q2M9 3149 aa6.24□□□□□ -1.41
Col6a5-203ENSMUST00000190193 Trank1Q8BV79 2999 aa6.23□□□□□ -1.41
Col6a5-203ENSMUST00000190193 Zfhx3Q61329 3726 aa6.23□□□□□ -1.41
Col6a5-203ENSMUST00000190193 Vps13cQ8BX70 3748 aa6.23□□□□□ -1.41
Col6a5-203ENSMUST00000190193 Romo1P60603 79 aa6.23□□□□□ -1.41
Col6a5-203ENSMUST00000190193 A730071L15RikQ8C4X0 137 aa6.23□□□□□ -1.41
Col6a5-203ENSMUST00000190193 HttP42859 3119 aa6.23□□□□□ -1.41
Col6a5-203ENSMUST00000190193 Gm11565A2A4M7 156 aa6.21□□□□□ -1.42
Col6a5-203ENSMUST00000190193 Spink7Q6IE32 76 aa6.21□□□□□ -1.42
Col6a5-203ENSMUST00000190193 AspmQ8CJ27 3122 aa6.2□□□□□ -1.42
Col6a5-203ENSMUST00000190193 Frem2Q6NVD0 3160 aa6.19□□□□□ -1.42
Col6a5-203ENSMUST00000190193 Pdzd2E9Q1M1 2796 aa6.19□□□□□ -1.42
Col6a5-203ENSMUST00000190193 Celsr2Q9R0M0 2920 aa6.18□□□□□ -1.42
Col6a5-203ENSMUST00000190193 LrbaQ9ESE1 2856 aa6.18□□□□□ -1.42
Col6a5-203ENSMUST00000190193 Sprr1aQ62266 144 aa6.17□□□□□ -1.42
Col6a5-203ENSMUST00000190193 OxtP35454 125 aa6.16□□□□□ -1.42
Col6a5-203ENSMUST00000190193 Dmxl2Q8BPN8 3032 aa6.16□□□□□ -1.42
Col6a5-203ENSMUST00000190193 Gm16253D3Z167 63 aa6.15□□□□□ -1.42
Col6a5-203ENSMUST00000190193 Rpl37Q9D823 97 aa6.14□□□□□ -1.43
Col6a5-203ENSMUST00000190193 Gm10382Q3V0T5 144 aa6.1□□□□□ -1.43
Col6a5-203ENSMUST00000190193 Tenm1Q9WTS4 2731 aa6.1□□□□□ -1.43
Col6a5-203ENSMUST00000190193 Camk2n1Q6QWF9 78 aa6.1□□□□□ -1.43
Col6a5-203ENSMUST00000190193 FcgbpE9Q0B5 2583 aa6.09□□□□□ -1.43
Col6a5-203ENSMUST00000190193 Adgrg4B7ZCC9 3073 aa6.08□□□□□ -1.44
Col6a5-203ENSMUST00000190193 Fam229aB2KGE5 128 aa6.07□□□□□ -1.44
Col6a5-203ENSMUST00000190193 DmdP11531 3678 aa6.04□□□□□ -1.44
Col6a5-203ENSMUST00000190193 Gm3250E9Q1M3 230 aa6.04□□□□□ -1.44
Col6a5-203ENSMUST00000190193 Brca2P97929 3329 aa6.04□□□□□ -1.44
Col6a5-203ENSMUST00000190193 Cox6b2Q80ZN9 88 aa6.03□□□□□ -1.44
Col6a5-203ENSMUST00000190193 Dchs2A0A0A6YW72 3346 aa6.03□□□□□ -1.44
Col6a5-203ENSMUST00000190193 Gm2310J3QNJ2 377 aa6.02□□□□□ -1.45
Col6a5-203ENSMUST00000190193 Krtap29-1A2A5X4 342 aa6.01□□□□□ -1.45
Col6a5-203ENSMUST00000190193 Lrrc37aB1AWG4 3215 aa6□□□□□ -1.45
Col6a5-203ENSMUST00000190193 Szt2A2A9C3 3431 aa5.99□□□□□ -1.45
Col6a5-203ENSMUST00000190193 VcanQ62059 3357 aa5.96□□□□□ -1.45
Col6a5-203ENSMUST00000190193 Gm19426M0QWC7 77 aa5.95□□□□□ -1.46
Col6a5-203ENSMUST00000190193 Tenm3Q9WTS6 2715 aa5.94□□□□□ -1.46
Col6a5-203ENSMUST00000190193 Krtap15-1Q9QZU5 150 aa5.94□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 167.4 ms