RNA–Protein interactions for RNA: ENSMUST00000169900.7

Scn9a-207, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 7,497 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-207ENSMUST00000169900 Krtap26-1Q9D7N2 215 aa3.42□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Ighv2-2A0A075B5P8 116 aa3.41□□□□□ -1.86
Scn9a-207ENSMUST00000169900 P01821 116 aa3.41□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Col7a1Q63870 2944 aa3.41□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Gm44790A0A0N4SV91 103 aa3.41□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Gm10770F7D043 238 aa3.41□□□□□ -1.86
Scn9a-207ENSMUST00000169900 3110070M22RikQ9DAQ7 118 aa3.41□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Msrb1Q9JLC3 116 aa3.4□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Helz2E9QAM5 2947 aaKnown RBP3.4□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Gm9821Q8K076 103 aa3.39□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Rps28P62858 69 aaKnown RBP3.39□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Gm3233E9Q2H5 230 aa3.39□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Elof1P60003 83 aa3.38□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Nf1Q04690 2841 aa3.38□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Zfhx3Q61329 3726 aa3.38□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Chd6A3KFM7 2711 aa3.38□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Camk2n1Q6QWF9 78 aa3.38□□□□□ -1.87
Scn9a-207ENSMUST00000169900 AI854703Q8BIN3 203 aa3.38□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Prr13Q9CQJ5 137 aa3.37□□□□□ -1.87
Scn9a-207ENSMUST00000169900 LrbaQ9ESE1 2856 aa3.37□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Gm10772F7AIG4 85 aa3.37□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Coa5Q99M07 74 aa3.36□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Csmd2V9GX34 3611 aa3.35□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Gm11565A2A4M7 156 aa3.35□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Igsf10Q3V1M1 2594 aa3.35□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Plac8Q9JI48 112 aa3.35□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Gm884A2A9H6 3643 aa3.34□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Fam168bQ80XQ8 194 aa3.34□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Muc5acE9QAQ8 3455 aa3.34□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Mast4Q811L6 2618 aa3.34□□□□□ -1.87
Scn9a-207ENSMUST00000169900 Krtap11-1E9Q2E9 183 aa3.34□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Chtf8P0CG14 533 aa3.34□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Pdzd2E9Q1M1 2796 aa3.34□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Krtap16-1A2A5X5 502 aa3.34□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Sprr4Q8CGN8 76 aa3.33□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Gcn1E9PVA8 2671 aaKnown RBP3.33□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Phxr4P15974 95 aa3.33□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Defb9Q8R2I6 67 aa3.33□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Q8BT88 171 aa3.33□□□□□ -1.88
Scn9a-207ENSMUST00000169900 A330070K13RikQ8CA53 115 aa3.33□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Lypd5Q9D7Z7 256 aa3.32□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Vps13cQ8BX70 3748 aa3.32□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Uqcr11Q9CPX8 56 aa3.32□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Celsr2Q9R0M0 2920 aa3.31□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Fam229aB2KGE5 128 aa3.31□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Fn1P11276 2477 aaKnown RBP3.31□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Gm3880A0A1B0GSB3 72 aa3.31□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Gm7138L7N2C3 230 aa3.31□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Gm3238W4VSP7 230 aa3.31□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Adgrg4B7ZCC9 3073 aa3.31□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Gm11213A0A1B0GR83 88 aa3.31□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Fam104aA2A6P4 185 aa3.31□□□□□ -1.88
Scn9a-207ENSMUST00000169900 CnbpP53996 178 aaKnown RBP3.3□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Celsr3Q91ZI0 3301 aa3.3□□□□□ -1.88
Scn9a-207ENSMUST00000169900 FlnaQ8BTM8 2647 aaKnown RBP3.3□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Akap9Q70FJ1 3797 aa3.3□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Notch1Q01705 2531 aa3.29□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Tenm3Q9WTS6 2715 aa3.29□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Smr3aQ61900 147 aa3.29□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Sprr1bQ62267 153 aa3.29□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Gm26620Q9CY65 116 aa3.29□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Gm7137J3QMW1 236 aa3.28□□□□□ -1.88
Scn9a-207ENSMUST00000169900 Cypt15B1AXS0 87 aa3.27□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Lama5Q61001 3718 aa3.27□□□□□ -1.89
Scn9a-207ENSMUST00000169900 LystP97412 3788 aa3.26□□□□□ -1.89
Scn9a-207ENSMUST00000169900 AY074887Q8R5F9 132 aa3.26□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Anapc11Q9CPX9 84 aa3.26□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Zcchc13Q9D548 170 aa3.26□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Chd9Q8BYH8 2885 aa3.25□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Gm17349F7BGH6 99 aa3.25□□□□□ -1.89
Scn9a-207ENSMUST00000169900 NbdyA0A0N4SUI7 68 aa3.25□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Tenm1Q9WTS4 2731 aa3.25□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Gm9955Q8CEJ8 102 aa3.24□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Gm10065F6TJM2 114 aa3.24□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Gm7276Q3TYW4 209 aa3.24□□□□□ -1.89
Scn9a-207ENSMUST00000169900 OtogO55225 2910 aa3.24□□□□□ -1.89
Scn9a-207ENSMUST00000169900 NipblQ6KCD5 2798 aaKnown RBP3.24□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Gm10308Q9CVR5 141 aa3.24□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Lelp1Q9DAE3 120 aa3.24□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Tex15F8VPN2 2785 aa3.23□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Fam229bQ8CF36 80 aa3.23□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Hivep1Q03172 2688 aa3.23□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Eif4ebp3Q80VV3 101 aa3.22□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Cypt14J3QPF7 87 aa3.22□□□□□ -1.89
Scn9a-207ENSMUST00000169900 Krtap15-1Q9QZU5 150 aa3.21□□□□□ -1.9
Scn9a-207ENSMUST00000169900 Gm21798J3QNU5 87 aa3.21□□□□□ -1.9
Scn9a-207ENSMUST00000169900 C530025M09RikF6RGA8 229 aa3.21□□□□□ -1.9
Scn9a-207ENSMUST00000169900 Igfn1Q3KNY0 2849 aa3.2□□□□□ -1.9
Scn9a-207ENSMUST00000169900 Tenm4Q3UHK6 2771 aa3.19□□□□□ -1.9
Scn9a-207ENSMUST00000169900 Gm36176A0A1W2P8D5 158 aa3.19□□□□□ -1.9
Scn9a-207ENSMUST00000169900 Gm10382Q3V0T5 144 aa3.19□□□□□ -1.9
Scn9a-207ENSMUST00000169900 Gm10643Q3URG9 111 aa3.19□□□□□ -1.9
Scn9a-207ENSMUST00000169900 Gm10320E9PW43 113 aa3.19□□□□□ -1.9
Scn9a-207ENSMUST00000169900 2310034C09RikQ9D746 214 aa3.18□□□□□ -1.9
Scn9a-207ENSMUST00000169900 Nbeal2Q6ZQA0 2742 aa3.18□□□□□ -1.9
Scn9a-207ENSMUST00000169900 Sec61bQ9CQS8 96 aaKnown RBP3.18□□□□□ -1.9
Scn9a-207ENSMUST00000169900 Smg1Q8BKX6 3658 aaKnown RBP3.17□□□□□ -1.9
Scn9a-207ENSMUST00000169900 Romo1P60603 79 aa3.17□□□□□ -1.9
Scn9a-207ENSMUST00000169900 Col6a5A6H584 2640 aa3.16□□□□□ -1.9
Scn9a-207ENSMUST00000169900 9530053A07RikE9PVG8 2581 aa3.16□□□□□ -1.9
Retrieved 100 of 22,080 RNA–protein pairs in 67.7 ms