RNA–Protein interactions for RNA: ENSMUST00000169900.7

Scn9a-207, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 7,497 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-207ENSMUST00000169900 Rhox8Q6VSS7 320 aa9.15□□□□□ -0.94
Scn9a-207ENSMUST00000169900 Gm35339A0A140LHH9 1649 aa8.48□□□□□ -1.05
Scn9a-207ENSMUST00000169900 Esf1Q3V1V3 845 aaKnown RBP8.24□□□□□ -1.09
Scn9a-207ENSMUST00000169900 NischQ80TM9 1593 aa8.15□□□□□ -1.1
Scn9a-207ENSMUST00000169900 Abcc9P70170 1546 aa8.12□□□□□ -1.11
Scn9a-207ENSMUST00000169900 Cngb1E1AZ71 1325 aa8.1□□□□□ -1.11
Scn9a-207ENSMUST00000169900 Zeb1Q64318 1117 aa8.1□□□□□ -1.11
Scn9a-207ENSMUST00000169900 Ccdc136Q3TVA9 1136 aa8.07□□□□□ -1.12
Scn9a-207ENSMUST00000169900 Abcc8B2RUS7 1588 aa8.02□□□□□ -1.13
Scn9a-207ENSMUST00000169900 Npm2Q80W85 207 aa7.99□□□□□ -1.13
Scn9a-207ENSMUST00000169900 Ehmt2Q9Z148 1263 aaKnown RBP7.98□□□□□ -1.13
Scn9a-207ENSMUST00000169900 Ube2uB1AUC4 352 aa7.98□□□□□ -1.13
Scn9a-207ENSMUST00000169900 Trim41Q5NCC3 630 aa7.98□□□□□ -1.13
Scn9a-207ENSMUST00000169900 Gab3Q8BSM5 595 aa7.87□□□□□ -1.15
Scn9a-207ENSMUST00000169900 Amer1Q7TS75 1132 aa7.84□□□□□ -1.15
Scn9a-207ENSMUST00000169900 Myt1lP97500 1187 aa7.83□□□□□ -1.16
Scn9a-207ENSMUST00000169900 Pelp1Q9DBD5 1123 aaKnown RBP7.79□□□□□ -1.16
Scn9a-207ENSMUST00000169900 Wdr66E9Q743 1299 aa7.78□□□□□ -1.16
Scn9a-207ENSMUST00000169900 Las1lA2BE28 776 aaKnown RBP7.78□□□□□ -1.16
Scn9a-207ENSMUST00000169900 Il27Q8K3I6 234 aa7.74□□□□□ -1.17
Scn9a-207ENSMUST00000169900 Rpgrip1Q9EPQ2 1331 aa7.69□□□□□ -1.18
Scn9a-207ENSMUST00000169900 Dcaf1Q80TR8 1506 aa7.63□□□□□ -1.19
Scn9a-207ENSMUST00000169900 ScribQ80U72 1612 aa7.62□□□□□ -1.19
Scn9a-207ENSMUST00000169900 4930567H17RikQ3V0K5 233 aa7.62□□□□□ -1.19
Scn9a-207ENSMUST00000169900 Ttbk1Q6PCN3 1308 aa7.54□□□□□ -1.2
Scn9a-207ENSMUST00000169900 Zcchc6Q5BLK4 1491 aaKnown RBP7.54□□□□□ -1.2
Scn9a-207ENSMUST00000169900 Npm1Q61937 292 aaKnown RBP7.51□□□□□ -1.21
Scn9a-207ENSMUST00000169900 UbtfP25976 765 aaKnown RBP7.49□□□□□ -1.21
Scn9a-207ENSMUST00000169900 CenpbP27790 599 aa7.47□□□□□ -1.21
Scn9a-207ENSMUST00000169900 Os9Q8K2C7 672 aa7.45□□□□□ -1.22
Scn9a-207ENSMUST00000169900 Ap3b1Q9Z1T1 1105 aa7.44□□□□□ -1.22
Scn9a-207ENSMUST00000169900 Slc24a1Q91WD8 1130 aa7.42□□□□□ -1.22
Scn9a-207ENSMUST00000169900 Gm13697A2AK42 830 aa7.42□□□□□ -1.22
Scn9a-207ENSMUST00000169900 Ifnlr1Q8CGK5 535 aa7.4□□□□□ -1.22
Scn9a-207ENSMUST00000169900 Fam50aQ9WV03 339 aaKnown RBP7.38□□□□□ -1.23
Scn9a-207ENSMUST00000169900 NclP09405 707 aaKnown RBP7.37□□□□□ -1.23
Scn9a-207ENSMUST00000169900 4933416C03RikQ3V063 378 aa7.34□□□□□ -1.23
Scn9a-207ENSMUST00000169900 Anp32bQ9EST5 272 aaKnown RBP7.34□□□□□ -1.23
Scn9a-207ENSMUST00000169900 NefmP08553 848 aa7.33□□□□□ -1.24
Scn9a-207ENSMUST00000169900 Neurod1Q60867 357 aa7.32□□□□□ -1.24
Scn9a-207ENSMUST00000169900 HrcG5E8J6 738 aa7.31□□□□□ -1.24
Scn9a-207ENSMUST00000169900 Stra8P70278 393 aa7.31□□□□□ -1.24
Scn9a-207ENSMUST00000169900 Ccdc180J3QNE4 1664 aa7.3□□□□□ -1.24
Scn9a-207ENSMUST00000169900 Plppr3Q7TPB0 716 aa7.3□□□□□ -1.24
Scn9a-207ENSMUST00000169900 Ubl4bQ9CQ84 188 aa7.3□□□□□ -1.24
Scn9a-207ENSMUST00000169900 Hnrnpul2Q00PI9 745 aaKnown RBP7.28□□□□□ -1.24
Scn9a-207ENSMUST00000169900 Zbtb7cQ8VCZ7 619 aa7.28□□□□□ -1.24
Scn9a-207ENSMUST00000169900 Crybg2B7ZCC2 1516 aa7.28□□□□□ -1.24
Scn9a-207ENSMUST00000169900 Kdm5dQ62240 1548 aa7.25□□□□□ -1.25
Scn9a-207ENSMUST00000169900 Fkbp15Q6P9Q6 1216 aaKnown RBP7.25□□□□□ -1.25
Scn9a-207ENSMUST00000169900 Gm13695A2AK44 830 aa7.25□□□□□ -1.25
Scn9a-207ENSMUST00000169900 Atp1b4Q99ME6 356 aa7.23□□□□□ -1.25
Scn9a-207ENSMUST00000169900 Myt1Q8CFC2 1127 aa7.23□□□□□ -1.25
Scn9a-207ENSMUST00000169900 Lmod2Q3UHZ5 550 aa7.23□□□□□ -1.25
Scn9a-207ENSMUST00000169900 NacadQ5SWP3 1504 aa7.22□□□□□ -1.25
Scn9a-207ENSMUST00000169900 NrdcQ8BHG1 1161 aa7.22□□□□□ -1.25
Scn9a-207ENSMUST00000169900 Erich6D3Z6S9 713 aa7.19□□□□□ -1.26
Scn9a-207ENSMUST00000169900 Safb2Q80YR5 991 aaKnown RBP7.19□□□□□ -1.26
Scn9a-207ENSMUST00000169900 Hdac5Q9Z2V6 1113 aa7.18□□□□□ -1.26
Scn9a-207ENSMUST00000169900 Ppargc1bQ8VHJ7 1014 aa7.17□□□□□ -1.26
Scn9a-207ENSMUST00000169900 Chic1Q8CBW7 227 aa7.16□□□□□ -1.26
Scn9a-207ENSMUST00000169900 Sycp2Q9CUU3 1500 aa7.15□□□□□ -1.27
Scn9a-207ENSMUST00000169900 Eif5bQ05D44 1216 aaKnown RBP7.14□□□□□ -1.27
Scn9a-207ENSMUST00000169900 Brd4Q9ESU6 1400 aaKnown RBP7.14□□□□□ -1.27
Scn9a-207ENSMUST00000169900 NeflP08551 543 aa7.11□□□□□ -1.27
Scn9a-207ENSMUST00000169900 Acin1Q9JIX8 1338 aaKnown RBP7.11□□□□□ -1.27
Scn9a-207ENSMUST00000169900 Baz1aO88379 1555 aa7.1□□□□□ -1.27
Scn9a-207ENSMUST00000169900 BicraF8VPZ9 1578 aa7.1□□□□□ -1.27
Scn9a-207ENSMUST00000169900 DiexfQ8BTT6 772 aaKnown RBP7.08□□□□□ -1.28
Scn9a-207ENSMUST00000169900 Plekhg3Q4VAC9 1341 aa7.08□□□□□ -1.28
Scn9a-207ENSMUST00000169900 Cdk11bP24788 784 aaKnown RBP7.07□□□□□ -1.28
Scn9a-207ENSMUST00000169900 Ercc6F8VPZ5 1481 aa7.06□□□□□ -1.28
Scn9a-207ENSMUST00000169900 Rtl1Q7M732 1744 aa7.06□□□□□ -1.28
Scn9a-207ENSMUST00000169900 Zbtb4Q5F293 982 aa7.04□□□□□ -1.28
Scn9a-207ENSMUST00000169900 TonslQ6NZL6 1363 aa7.04□□□□□ -1.28
Scn9a-207ENSMUST00000169900 Nlrp6Q91WS2 869 aa7.03□□□□□ -1.28
Scn9a-207ENSMUST00000169900 Rb1cc1Q9ESK9 1588 aa7.03□□□□□ -1.28
Scn9a-207ENSMUST00000169900 Smarca2Q6DIC0 1577 aa7.03□□□□□ -1.28
Scn9a-207ENSMUST00000169900 Prdm10Q3UTQ7 1184 aa7.01□□□□□ -1.29
Scn9a-207ENSMUST00000169900 Clstn2Q9ER65 966 aa7.01□□□□□ -1.29
Scn9a-207ENSMUST00000169900 CatipB9EKE5 520 aa6.99□□□□□ -1.29
Scn9a-207ENSMUST00000169900 Rsf1E9PWW9 1441 aaKnown RBP6.99□□□□□ -1.29
Scn9a-207ENSMUST00000169900 Pcgf6Q99NA9 353 aa6.98□□□□□ -1.29
Scn9a-207ENSMUST00000169900 Clip1Q922J3 1391 aa6.98□□□□□ -1.29
Scn9a-207ENSMUST00000169900 Kif15Q6P9L6 1387 aa6.98□□□□□ -1.29
Scn9a-207ENSMUST00000169900 Gm38655A0A286YDK6 273 aa6.98□□□□□ -1.29
Scn9a-207ENSMUST00000169900 P3h3Q8CG70 732 aa6.98□□□□□ -1.29
Scn9a-207ENSMUST00000169900 MyclP10166 368 aa6.97□□□□□ -1.29
Scn9a-207ENSMUST00000169900 Nop58Q6DFW4 536 aaKnown RBP6.96□□□□□ -1.29
Scn9a-207ENSMUST00000169900 Ythdc1E9Q5K9 736 aaKnown RBP6.95□□□□□ -1.3
Scn9a-207ENSMUST00000169900 DaxxO35613 739 aa6.95□□□□□ -1.3
Scn9a-207ENSMUST00000169900 Arhgap27A2AB59 869 aa6.95□□□□□ -1.3
Scn9a-207ENSMUST00000169900 Tnnt3Q9QZ47 272 aa6.94□□□□□ -1.3
Scn9a-207ENSMUST00000169900 Cep164Q5DU05 1446 aa6.94□□□□□ -1.3
Scn9a-207ENSMUST00000169900 Ppp1r18Q8BQ30 594 aa6.94□□□□□ -1.3
Scn9a-207ENSMUST00000169900 Ccer2J3QPU5 274 aa6.93□□□□□ -1.3
Scn9a-207ENSMUST00000169900 ArxO35085 564 aa6.93□□□□□ -1.3
Scn9a-207ENSMUST00000169900 Mier1Q5UAK0 511 aa6.93□□□□□ -1.3
Scn9a-207ENSMUST00000169900 Ccdc18Q640L5 1455 aa6.92□□□□□ -1.3
Scn9a-207ENSMUST00000169900 Polr3glQ8R0C0 218 aa6.91□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 54.5 ms