RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Krtap13O88375 197 aa9.14□□□□□ -0.95
Ccdc50-203ENSMUST00000100026 Gm19426M0QWC7 77 aa9.14□□□□□ -0.95
Ccdc50-203ENSMUST00000100026 Golgb1E9PVZ8 3238 aa9.14□□□□□ -0.95
Ccdc50-203ENSMUST00000100026 Krtap29-1A2A5X4 342 aa9.12□□□□□ -0.95
Ccdc50-203ENSMUST00000100026 Hectd1Q69ZR2 2618 aaKnown RBP9.1□□□□□ -0.95
Ccdc50-203ENSMUST00000100026 Gm16253D3Z167 63 aa9.09□□□□□ -0.95
Ccdc50-203ENSMUST00000100026 UtrnE9Q6R7 3430 aa9.07□□□□□ -0.96
Ccdc50-203ENSMUST00000100026 Prune2Q52KR3 3084 aa9.05□□□□□ -0.96
Ccdc50-203ENSMUST00000100026 Gm37013Q8K491 104 aa9.03□□□□□ -0.96
Ccdc50-203ENSMUST00000100026 2310050C09RikG5E8Z3 280 aa9.03□□□□□ -0.96
Ccdc50-203ENSMUST00000100026 Krtap10-4Q08EG8 221 aa9.03□□□□□ -0.96
Ccdc50-203ENSMUST00000100026 Dnah12Q3V0Q1 3086 aa9.02□□□□□ -0.97
Ccdc50-203ENSMUST00000100026 Jbts17Q8CE72 3214 aa9.01□□□□□ -0.97
Ccdc50-203ENSMUST00000100026 Gcn1E9PVA8 2671 aaKnown RBP9.01□□□□□ -0.97
Ccdc50-203ENSMUST00000100026 HrnrQ8VHD8 2496 aa9□□□□□ -0.97
Ccdc50-203ENSMUST00000100026 BC029722A0A0N4SW31 51 aa8.99□□□□□ -0.97
Ccdc50-203ENSMUST00000100026 Akap13E9Q394 2776 aa8.99□□□□□ -0.97
Ccdc50-203ENSMUST00000100026 Ep400Q8CHI8 3072 aaKnown RBP8.97□□□□□ -0.97
Ccdc50-203ENSMUST00000100026 Stab1Q8R4Y4 2571 aa8.94□□□□□ -0.98
Ccdc50-203ENSMUST00000100026 Notch1Q01705 2531 aa8.93□□□□□ -0.98
Ccdc50-203ENSMUST00000100026 Krtap10-10A0A1W2P7T6 217 aa8.92□□□□□ -0.98
Ccdc50-203ENSMUST00000100026 Rpl37Q9D823 97 aa8.87□□□□□ -0.99
Ccdc50-203ENSMUST00000100026 Igsf10Q3V1M1 2594 aa8.86□□□□□ -0.99
Ccdc50-203ENSMUST00000100026 PcntP48725 2898 aa8.86□□□□□ -0.99
Ccdc50-203ENSMUST00000100026 Tnp2P11378 117 aa8.84□□□□□ -0.99
Ccdc50-203ENSMUST00000100026 Krtap14O08640 167 aa8.81□□□□□ -1
Ccdc50-203ENSMUST00000100026 A730071L15RikQ8C4X0 137 aa8.8□□□□□ -1
Ccdc50-203ENSMUST00000100026 Romo1P60603 79 aa8.79□□□□□ -1
Ccdc50-203ENSMUST00000100026 Cystm1Q8K353 104 aa8.79□□□□□ -1
Ccdc50-203ENSMUST00000100026 Bod1lE9Q6J5 3032 aa8.78□□□□□ -1
Ccdc50-203ENSMUST00000100026 Mast4Q811L6 2618 aa8.77□□□□□ -1
Ccdc50-203ENSMUST00000100026 Itpr3P70227 2670 aa8.76□□□□□ -1.01
Ccdc50-203ENSMUST00000100026 Cep350E9Q309 3095 aa8.73□□□□□ -1.01
Ccdc50-203ENSMUST00000100026 2310061N02RikQ9D6S9 174 aa8.71□□□□□ -1.01
Ccdc50-203ENSMUST00000100026 TrioQ0KL02 3102 aa8.7□□□□□ -1.02
Ccdc50-203ENSMUST00000100026 Gm10382Q3V0T5 144 aa8.7□□□□□ -1.02
Ccdc50-203ENSMUST00000100026 Kmt2bO08550 2713 aa8.69□□□□□ -1.02
Ccdc50-203ENSMUST00000100026 Gm2696A0A1W2P709 240 aa8.69□□□□□ -1.02
Ccdc50-203ENSMUST00000100026 9530053A07RikE9PVG8 2581 aa8.66□□□□□ -1.02
Ccdc50-203ENSMUST00000100026 Lama3Q61789 3330 aa8.66□□□□□ -1.02
Ccdc50-203ENSMUST00000100026 Rps29P62274 56 aa8.66□□□□□ -1.02
Ccdc50-203ENSMUST00000100026 Prrc2cQ3TLH4 2846 aaKnown RBP8.65□□□□□ -1.03
Ccdc50-203ENSMUST00000100026 MgaA2AWL7 3003 aaKnown RBP8.65□□□□□ -1.03
Ccdc50-203ENSMUST00000100026 Gm3646F6S692 53 aa8.64□□□□□ -1.03
Ccdc50-203ENSMUST00000100026 Col12a1Q60847 3120 aa8.62□□□□□ -1.03
Ccdc50-203ENSMUST00000100026 Gm2310J3QNJ2 377 aa8.6□□□□□ -1.03
Ccdc50-203ENSMUST00000100026 Itpr1P11881 2749 aa8.59□□□□□ -1.03
Ccdc50-203ENSMUST00000100026 Tep1P97499 2629 aa8.59□□□□□ -1.03
Ccdc50-203ENSMUST00000100026 NipblQ6KCD5 2798 aaKnown RBP8.57□□□□□ -1.04
Ccdc50-203ENSMUST00000100026 Map1aQ9QYR6 2776 aa8.57□□□□□ -1.04
Ccdc50-203ENSMUST00000100026 Ubr5Q80TP3 2792 aa8.54□□□□□ -1.04
Ccdc50-203ENSMUST00000100026 Nbeal2Q6ZQA0 2742 aa8.54□□□□□ -1.04
Ccdc50-203ENSMUST00000100026 2310057N15RikQ9D6T8 200 aa8.53□□□□□ -1.04
Ccdc50-203ENSMUST00000100026 Rev3lQ61493 3122 aa8.5□□□□□ -1.05
Ccdc50-203ENSMUST00000100026 Myo15bI7HPW8 3033 aa8.5□□□□□ -1.05
Ccdc50-203ENSMUST00000100026 Lama2Q60675 3118 aaKnown RBP8.48□□□□□ -1.05
Ccdc50-203ENSMUST00000100026 Gm7173A0A0G2JEB6 3132 aa8.45□□□□□ -1.06
Ccdc50-203ENSMUST00000100026 Gm5965D3Z724 196 aa8.45□□□□□ -1.06
Ccdc50-203ENSMUST00000100026 Cox6b2Q80ZN9 88 aa8.44□□□□□ -1.06
Ccdc50-203ENSMUST00000100026 Dmxl1Q6PNC0 3013 aa8.44□□□□□ -1.06
Ccdc50-203ENSMUST00000100026 Ash1lQ99MY8 2958 aa8.42□□□□□ -1.06
Ccdc50-203ENSMUST00000100026 Chd6A3KFM7 2711 aa8.42□□□□□ -1.06
Ccdc50-203ENSMUST00000100026 Gm21887J3QQ04 176 aa8.42□□□□□ -1.06
Ccdc50-203ENSMUST00000100026 HttP42859 3119 aa8.39□□□□□ -1.07
Ccdc50-203ENSMUST00000100026 Stab2Q8R4U0 2559 aa8.38□□□□□ -1.07
Ccdc50-203ENSMUST00000100026 Fbn2Q61555 2907 aa8.38□□□□□ -1.07
Ccdc50-203ENSMUST00000100026 Chd7A2AJK6 2986 aaKnown RBP8.37□□□□□ -1.07
Ccdc50-203ENSMUST00000100026 Pkd1l1Q8R526 2615 aa8.36□□□□□ -1.07
Ccdc50-203ENSMUST00000100026 Mki67E9PVX6 3177 aaKnown RBP8.36□□□□□ -1.07
Ccdc50-203ENSMUST00000100026 D6Ertd527eA0A0N4SWI3 464 aa8.34□□□□□ -1.07
Ccdc50-203ENSMUST00000100026 Usp34Q6ZQ93 3582 aa8.33□□□□□ -1.08
Ccdc50-203ENSMUST00000100026 Tnrc18Q80WC3 2878 aa8.31□□□□□ -1.08
Ccdc50-203ENSMUST00000100026 KalrnA2CG49 2964 aa8.29□□□□□ -1.08
Ccdc50-203ENSMUST00000100026 Itpr2Q9Z329 2701 aa8.28□□□□□ -1.08
Ccdc50-203ENSMUST00000100026 A930033H14RikG5E8X6 103 aa8.28□□□□□ -1.08
Ccdc50-203ENSMUST00000100026 Col6a5A6H584 2640 aa8.26□□□□□ -1.09
Ccdc50-203ENSMUST00000100026 Ranbp2Q9ERU9 3053 aaKnown RBP8.26□□□□□ -1.09
Ccdc50-203ENSMUST00000100026 4933415A04RikQ9D443 101 aa8.24□□□□□ -1.09
Ccdc50-203ENSMUST00000100026 Muc2Q80Z19 2680 aa8.21□□□□□ -1.1
Ccdc50-203ENSMUST00000100026 FcgbpE9Q0B5 2583 aa8.2□□□□□ -1.1
Ccdc50-203ENSMUST00000100026 Tnp1P10856 55 aa8.17□□□□□ -1.1
Ccdc50-203ENSMUST00000100026 Igfn1Q3KNY0 2849 aa8.16□□□□□ -1.1
Ccdc50-203ENSMUST00000100026 Cdh23Q99PF4 3354 aa8.13□□□□□ -1.11
Ccdc50-203ENSMUST00000100026 Celsr1O35161 3034 aa8.13□□□□□ -1.11
Ccdc50-203ENSMUST00000100026 1700042G07RikB1AUF7 90 aa8.13□□□□□ -1.11
Ccdc50-203ENSMUST00000100026 Hivep1Q03172 2688 aa8.12□□□□□ -1.11
Ccdc50-203ENSMUST00000100026 BptfA2A654 3036 aaKnown RBP8.08□□□□□ -1.12
Ccdc50-203ENSMUST00000100026 Tenm4Q3UHK6 2771 aa8.07□□□□□ -1.12
Ccdc50-203ENSMUST00000100026 Cfap54Q8C6S9 3106 aa8.04□□□□□ -1.12
Ccdc50-203ENSMUST00000100026 AtmQ62388 3066 aa8.02□□□□□ -1.13
Ccdc50-203ENSMUST00000100026 Utp20Q5XG71 2788 aaKnown RBP8□□□□□ -1.13
Ccdc50-203ENSMUST00000100026 FryE9Q8I9 3020 aa7.96□□□□□ -1.13
Ccdc50-203ENSMUST00000100026 AspmQ8CJ27 3122 aa7.96□□□□□ -1.13
Ccdc50-203ENSMUST00000100026 Srrm2Q8BTI8 2703 aaKnown RBP7.96□□□□□ -1.14
Ccdc50-203ENSMUST00000100026 Ndufaf8A2AMZ4 74 aa7.93□□□□□ -1.14
Ccdc50-203ENSMUST00000100026 Unc80Q8BLN6 3261 aa7.88□□□□□ -1.15
Ccdc50-203ENSMUST00000100026 Wdfy4E9Q2M9 3149 aa7.88□□□□□ -1.15
Ccdc50-203ENSMUST00000100026 Gm9736A0A1W2P7N1 277 aa7.88□□□□□ -1.15
Ccdc50-203ENSMUST00000100026 Vps13aQ5H8C4 3166 aa7.87□□□□□ -1.15
Ccdc50-203ENSMUST00000100026 TgO08710 2766 aa7.87□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms