RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Cep350E9Q309 3095 aa4.66□□□□□ -1.66
Scn3a-201ENSMUST00000066432 A330070K13RikQ8CA53 115 aa4.64□□□□□ -1.67
Scn3a-201ENSMUST00000066432 Phxr5P08399 672 aa4.64□□□□□ -1.67
Scn3a-201ENSMUST00000066432 FcgbpE9Q0B5 2583 aa4.64□□□□□ -1.67
Scn3a-201ENSMUST00000066432 Defb9Q8R2I6 67 aa4.63□□□□□ -1.67
Scn3a-201ENSMUST00000066432 ApcQ61315 2845 aa4.63□□□□□ -1.67
Scn3a-201ENSMUST00000066432 Gm9821Q8K076 103 aa4.63□□□□□ -1.67
Scn3a-201ENSMUST00000066432 Rnase13Q5GAM7 153 aa4.62□□□□□ -1.67
Scn3a-201ENSMUST00000066432 Golgb1E9PVZ8 3238 aa4.62□□□□□ -1.67
Scn3a-201ENSMUST00000066432 Lama2Q60675 3118 aaKnown RBP4.62□□□□□ -1.67
Scn3a-201ENSMUST00000066432 Ash1lQ99MY8 2958 aa4.62□□□□□ -1.67
Scn3a-201ENSMUST00000066432 Prune2Q52KR3 3084 aa4.61□□□□□ -1.67
Scn3a-201ENSMUST00000066432 Sprr1aQ62266 144 aa4.6□□□□□ -1.67
Scn3a-201ENSMUST00000066432 Defb38Q7TNV7 63 aa4.6□□□□□ -1.67
Scn3a-201ENSMUST00000066432 Rps29P62274 56 aa4.59□□□□□ -1.67
Scn3a-201ENSMUST00000066432 Gm10139O88245 57 aa4.57□□□□□ -1.68
Scn3a-201ENSMUST00000066432 Pdzd2E9Q1M1 2796 aa4.56□□□□□ -1.68
Scn3a-201ENSMUST00000066432 FrylF8VQ05 3007 aa4.56□□□□□ -1.68
Scn3a-201ENSMUST00000066432 Gm9955Q8CEJ8 102 aa4.56□□□□□ -1.68
Scn3a-201ENSMUST00000066432 Gm21798J3QNU5 87 aa4.56□□□□□ -1.68
Scn3a-201ENSMUST00000066432 Srrm2Q8BTI8 2703 aaKnown RBP4.55□□□□□ -1.68
Scn3a-201ENSMUST00000066432 SrcapA0A087WQ44 3271 aa4.54□□□□□ -1.68
Scn3a-201ENSMUST00000066432 Chtf8P0CG14 533 aa4.53□□□□□ -1.68
Scn3a-201ENSMUST00000066432 NbeaQ9EPN1 2936 aa4.53□□□□□ -1.68
Scn3a-201ENSMUST00000066432 Gm16253D3Z167 63 aa4.53□□□□□ -1.68
Scn3a-201ENSMUST00000066432 2310034C09RikQ9D746 214 aa4.52□□□□□ -1.69
Scn3a-201ENSMUST00000066432 Nf1Q04690 2841 aa4.52□□□□□ -1.69
Scn3a-201ENSMUST00000066432 DspE9Q557 2883 aaKnown RBP4.52□□□□□ -1.69
Scn3a-201ENSMUST00000066432 TgO08710 2766 aa4.52□□□□□ -1.69
Scn3a-201ENSMUST00000066432 Krtap29-1A2A5X4 342 aa4.52□□□□□ -1.69
Scn3a-201ENSMUST00000066432 Gm37013Q8K491 104 aa4.52□□□□□ -1.69
Scn3a-201ENSMUST00000066432 Bod1lE9Q6J5 3032 aa4.49□□□□□ -1.69
Scn3a-201ENSMUST00000066432 Sec61bQ9CQS8 96 aaKnown RBP4.48□□□□□ -1.69
Scn3a-201ENSMUST00000066432 CriptO70333 101 aa4.48□□□□□ -1.69
Scn3a-201ENSMUST00000066432 Zzef1Q5SSH7 2924 aa4.48□□□□□ -1.69
Scn3a-201ENSMUST00000066432 6030445D17RikE9Q8F9 148 aa4.46□□□□□ -1.69
Scn3a-201ENSMUST00000066432 Pla2g10Q9QXX3 151 aa4.46□□□□□ -1.7
Scn3a-201ENSMUST00000066432 Rev3lQ61493 3122 aa4.46□□□□□ -1.7
Scn3a-201ENSMUST00000066432 Gm10320E9PW43 113 aa4.45□□□□□ -1.7
Scn3a-201ENSMUST00000066432 Usp34Q6ZQ93 3582 aa4.44□□□□□ -1.7
Scn3a-201ENSMUST00000066432 Fam229bQ8CF36 80 aa4.44□□□□□ -1.7
Scn3a-201ENSMUST00000066432 Gm7173A0A0G2JEB6 3132 aa4.44□□□□□ -1.7
Scn3a-201ENSMUST00000066432 Tenm1Q9WTS4 2731 aa4.43□□□□□ -1.7
Scn3a-201ENSMUST00000066432 Tenm4Q3UHK6 2771 aa4.42□□□□□ -1.7
Scn3a-201ENSMUST00000066432 Fam229aB2KGE5 128 aa4.41□□□□□ -1.7
Scn3a-201ENSMUST00000066432 Gm4491E0CX42 125 aa4.39□□□□□ -1.71
Scn3a-201ENSMUST00000066432 Jbts17Q8CE72 3214 aa4.39□□□□□ -1.71
Scn3a-201ENSMUST00000066432 Gm5767A0A0J9YTU8 78 aa4.39□□□□□ -1.71
Scn3a-201ENSMUST00000066432 Trank1Q8BV79 2999 aa4.38□□□□□ -1.71
Scn3a-201ENSMUST00000066432 Defb1P56386 69 aa4.38□□□□□ -1.71
Scn3a-201ENSMUST00000066432 Smim29Q8R043 75 aa4.38□□□□□ -1.71
Scn3a-201ENSMUST00000066432 HttP42859 3119 aa4.38□□□□□ -1.71
Scn3a-201ENSMUST00000066432 1700042G07RikB1AUF7 90 aa4.37□□□□□ -1.71
Scn3a-201ENSMUST00000066432 Gm3250E9Q1M3 230 aa4.36□□□□□ -1.71
Scn3a-201ENSMUST00000066432 A730071L15RikQ8C4X0 137 aa4.35□□□□□ -1.71
Scn3a-201ENSMUST00000066432 Lelp1Q9DAE3 120 aa4.35□□□□□ -1.71
Scn3a-201ENSMUST00000066432 Tenm3Q9WTS6 2715 aa4.34□□□□□ -1.71
Scn3a-201ENSMUST00000066432 Anapc11Q9CPX9 84 aa4.34□□□□□ -1.72
Scn3a-201ENSMUST00000066432 BptfA2A654 3036 aaKnown RBP4.33□□□□□ -1.72
Scn3a-201ENSMUST00000066432 Celsr2Q9R0M0 2920 aa4.33□□□□□ -1.72
Scn3a-201ENSMUST00000066432 UtrnE9Q6R7 3430 aa4.33□□□□□ -1.72
Scn3a-201ENSMUST00000066432 Gm3646F6S692 53 aa4.32□□□□□ -1.72
Scn3a-201ENSMUST00000066432 Gm17349F7BGH6 99 aa4.32□□□□□ -1.72
Scn3a-201ENSMUST00000066432 Tnp2P11378 117 aa4.31□□□□□ -1.72
Scn3a-201ENSMUST00000066432 Cox6b2Q80ZN9 88 aa4.3□□□□□ -1.72
Scn3a-201ENSMUST00000066432 Chd9Q8BYH8 2885 aa4.29□□□□□ -1.72
Scn3a-201ENSMUST00000066432 BC029722A0A0N4SW31 51 aa4.29□□□□□ -1.72
Scn3a-201ENSMUST00000066432 Gm2310J3QNJ2 377 aa4.29□□□□□ -1.72
Scn3a-201ENSMUST00000066432 Spink7Q6IE32 76 aa4.29□□□□□ -1.72
Scn3a-201ENSMUST00000066432 TrioQ0KL02 3102 aa4.28□□□□□ -1.72
Scn3a-201ENSMUST00000066432 SmcpP15265 143 aa4.27□□□□□ -1.73
Scn3a-201ENSMUST00000066432 Vps13aQ5H8C4 3166 aa4.27□□□□□ -1.73
Scn3a-201ENSMUST00000066432 LrbaQ9ESE1 2856 aa4.27□□□□□ -1.73
Scn3a-201ENSMUST00000066432 Mki67E9PVX6 3177 aaKnown RBP4.27□□□□□ -1.73
Scn3a-201ENSMUST00000066432 4933415A04RikQ9D443 101 aa4.27□□□□□ -1.73
Scn3a-201ENSMUST00000066432 Col12a1Q60847 3120 aa4.26□□□□□ -1.73
Scn3a-201ENSMUST00000066432 Rpl37Q9D823 97 aa4.26□□□□□ -1.73
Scn3a-201ENSMUST00000066432 Ranbp2Q9ERU9 3053 aaKnown RBP4.26□□□□□ -1.73
Scn3a-201ENSMUST00000066432 Camk2n1Q6QWF9 78 aa4.25□□□□□ -1.73
Scn3a-201ENSMUST00000066432 2310061N02RikQ9D6S9 174 aa4.25□□□□□ -1.73
Scn3a-201ENSMUST00000066432 Dmxl2Q8BPN8 3032 aa4.25□□□□□ -1.73
Scn3a-201ENSMUST00000066432 Cystm1Q8K353 104 aa4.24□□□□□ -1.73
Scn3a-201ENSMUST00000066432 Romo1P60603 79 aa4.21□□□□□ -1.74
Scn3a-201ENSMUST00000066432 FryE9Q8I9 3020 aa4.21□□□□□ -1.74
Scn3a-201ENSMUST00000066432 Krtap15-1Q9QZU5 150 aa4.2□□□□□ -1.74
Scn3a-201ENSMUST00000066432 Gm3880A0A1B0GSB3 72 aa4.2□□□□□ -1.74
Scn3a-201ENSMUST00000066432 Cfap54Q8C6S9 3106 aa4.2□□□□□ -1.74
Scn3a-201ENSMUST00000066432 Gm19426M0QWC7 77 aa4.18□□□□□ -1.74
Scn3a-201ENSMUST00000066432 Wdfy4E9Q2M9 3149 aa4.18□□□□□ -1.74
Scn3a-201ENSMUST00000066432 AtmQ62388 3066 aa4.18□□□□□ -1.74
Scn3a-201ENSMUST00000066432 Gm3233E9Q2H5 230 aa4.18□□□□□ -1.74
Scn3a-201ENSMUST00000066432 Megf8P60882 2789 aa4.17□□□□□ -1.74
Scn3a-201ENSMUST00000066432 2310050C09RikG5E8Z3 280 aa4.16□□□□□ -1.74
Scn3a-201ENSMUST00000066432 Celsr1O35161 3034 aa4.16□□□□□ -1.74
Scn3a-201ENSMUST00000066432 AspmQ8CJ27 3122 aa4.16□□□□□ -1.74
Scn3a-201ENSMUST00000066432 Krtap14O08640 167 aa4.15□□□□□ -1.74
Scn3a-201ENSMUST00000066432 Lama3Q61789 3330 aa4.14□□□□□ -1.75
Scn3a-201ENSMUST00000066432 Gm40193A0A1B0GT39 78 aa4.14□□□□□ -1.75
Scn3a-201ENSMUST00000066432 D6Ertd527eA0A0N4SWI3 464 aa4.13□□□□□ -1.75
Scn3a-201ENSMUST00000066432 Ank2Q8C8R3 3898 aa4.13□□□□□ -1.75
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms