RNA–Protein interactions for RNA: ENSMUST00000055949.3

Pcdhb18-201, Transcript of Protocadherin beta-18, mousemouse

APPRIS P1 BASIC

Gene Pcdhb18, Length 5,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18-201ENSMUST00000055949 Gm17349F7BGH6 99 aa7.88□□□□□ -1.15
Pcdhb18-201ENSMUST00000055949 HrnrQ8VHD8 2496 aa7.88□□□□□ -1.15
Pcdhb18-201ENSMUST00000055949 Ep400Q8CHI8 3072 aaKnown RBP7.87□□□□□ -1.15
Pcdhb18-201ENSMUST00000055949 Sprr1aQ62266 144 aa7.86□□□□□ -1.15
Pcdhb18-201ENSMUST00000055949 Prrc2cQ3TLH4 2846 aaKnown RBP7.86□□□□□ -1.15
Pcdhb18-201ENSMUST00000055949 Cystm1Q8K353 104 aa7.86□□□□□ -1.15
Pcdhb18-201ENSMUST00000055949 Gm16253D3Z167 63 aa7.85□□□□□ -1.15
Pcdhb18-201ENSMUST00000055949 Dnah12Q3V0Q1 3086 aa7.84□□□□□ -1.16
Pcdhb18-201ENSMUST00000055949 Igsf10Q3V1M1 2594 aa7.83□□□□□ -1.16
Pcdhb18-201ENSMUST00000055949 Gm5767A0A0J9YTU8 78 aa7.81□□□□□ -1.16
Pcdhb18-201ENSMUST00000055949 Gm7137J3QMW1 236 aa7.81□□□□□ -1.16
Pcdhb18-201ENSMUST00000055949 Gm3880A0A1B0GSB3 72 aa7.81□□□□□ -1.16
Pcdhb18-201ENSMUST00000055949 Lelp1Q9DAE3 120 aa7.8□□□□□ -1.16
Pcdhb18-201ENSMUST00000055949 Cep350E9Q309 3095 aa7.77□□□□□ -1.17
Pcdhb18-201ENSMUST00000055949 Gm9195A0A140LHT4 2805 aa7.74□□□□□ -1.17
Pcdhb18-201ENSMUST00000055949 Gm19426M0QWC7 77 aa7.74□□□□□ -1.17
Pcdhb18-201ENSMUST00000055949 BC029722A0A0N4SW31 51 aa7.74□□□□□ -1.17
Pcdhb18-201ENSMUST00000055949 Prune2Q52KR3 3084 aa7.73□□□□□ -1.17
Pcdhb18-201ENSMUST00000055949 Krtap29-1A2A5X4 342 aa7.73□□□□□ -1.17
Pcdhb18-201ENSMUST00000055949 Chd6A3KFM7 2711 aa7.72□□□□□ -1.17
Pcdhb18-201ENSMUST00000055949 TrioQ0KL02 3102 aa7.71□□□□□ -1.18
Pcdhb18-201ENSMUST00000055949 9530053A07RikE9PVG8 2581 aa7.71□□□□□ -1.18
Pcdhb18-201ENSMUST00000055949 A730071L15RikQ8C4X0 137 aa7.69□□□□□ -1.18
Pcdhb18-201ENSMUST00000055949 NipblQ6KCD5 2798 aaKnown RBP7.68□□□□□ -1.18
Pcdhb18-201ENSMUST00000055949 Map1aQ9QYR6 2776 aa7.67□□□□□ -1.18
Pcdhb18-201ENSMUST00000055949 Rpl37Q9D823 97 aa7.64□□□□□ -1.19
Pcdhb18-201ENSMUST00000055949 Lama2Q60675 3118 aaKnown RBP7.64□□□□□ -1.19
Pcdhb18-201ENSMUST00000055949 Gm3646F6S692 53 aa7.64□□□□□ -1.19
Pcdhb18-201ENSMUST00000055949 Rps29P62274 56 aa7.64□□□□□ -1.19
Pcdhb18-201ENSMUST00000055949 Jbts17Q8CE72 3214 aa7.62□□□□□ -1.19
Pcdhb18-201ENSMUST00000055949 Usp34Q6ZQ93 3582 aa7.61□□□□□ -1.19
Pcdhb18-201ENSMUST00000055949 Gm37013Q8K491 104 aa7.61□□□□□ -1.19
Pcdhb18-201ENSMUST00000055949 Gm36176A0A1W2P8D5 158 aa7.6□□□□□ -1.19
Pcdhb18-201ENSMUST00000055949 Itpr3P70227 2670 aa7.58□□□□□ -1.2
Pcdhb18-201ENSMUST00000055949 Tep1P97499 2629 aa7.57□□□□□ -1.2
Pcdhb18-201ENSMUST00000055949 Itpr1P11881 2749 aa7.56□□□□□ -1.2
Pcdhb18-201ENSMUST00000055949 2310050C09RikG5E8Z3 280 aa7.55□□□□□ -1.2
Pcdhb18-201ENSMUST00000055949 Stab2Q8R4U0 2559 aa7.54□□□□□ -1.2
Pcdhb18-201ENSMUST00000055949 Tnrc18Q80WC3 2878 aa7.53□□□□□ -1.2
Pcdhb18-201ENSMUST00000055949 Gm9508A0A1W2P7W0 230 aa7.53□□□□□ -1.2
Pcdhb18-201ENSMUST00000055949 Krtap13O88375 197 aa7.53□□□□□ -1.2
Pcdhb18-201ENSMUST00000055949 Romo1P60603 79 aa7.52□□□□□ -1.21
Pcdhb18-201ENSMUST00000055949 SmcpP15265 143 aa7.5□□□□□ -1.21
Pcdhb18-201ENSMUST00000055949 4933415A04RikQ9D443 101 aa7.48□□□□□ -1.21
Pcdhb18-201ENSMUST00000055949 1700042G07RikB1AUF7 90 aa7.47□□□□□ -1.21
Pcdhb18-201ENSMUST00000055949 Pkd1l1Q8R526 2615 aa7.47□□□□□ -1.21
Pcdhb18-201ENSMUST00000055949 Ash1lQ99MY8 2958 aa7.46□□□□□ -1.22
Pcdhb18-201ENSMUST00000055949 Bod1lE9Q6J5 3032 aa7.44□□□□□ -1.22
Pcdhb18-201ENSMUST00000055949 Ubr5Q80TP3 2792 aa7.44□□□□□ -1.22
Pcdhb18-201ENSMUST00000055949 Gm7173A0A0G2JEB6 3132 aa7.43□□□□□ -1.22
Pcdhb18-201ENSMUST00000055949 Lama3Q61789 3330 aa7.41□□□□□ -1.22
Pcdhb18-201ENSMUST00000055949 Gm2310J3QNJ2 377 aa7.4□□□□□ -1.22
Pcdhb18-201ENSMUST00000055949 Cox6b2Q80ZN9 88 aa7.4□□□□□ -1.22
Pcdhb18-201ENSMUST00000055949 Col6a5A6H584 2640 aa7.4□□□□□ -1.23
Pcdhb18-201ENSMUST00000055949 Chd7A2AJK6 2986 aaKnown RBP7.4□□□□□ -1.23
Pcdhb18-201ENSMUST00000055949 Mki67E9PVX6 3177 aaKnown RBP7.39□□□□□ -1.23
Pcdhb18-201ENSMUST00000055949 Gm10382Q3V0T5 144 aa7.39□□□□□ -1.23
Pcdhb18-201ENSMUST00000055949 Krtap14O08640 167 aa7.38□□□□□ -1.23
Pcdhb18-201ENSMUST00000055949 Myo15bI7HPW8 3033 aa7.37□□□□□ -1.23
Pcdhb18-201ENSMUST00000055949 Dmxl1Q6PNC0 3013 aa7.37□□□□□ -1.23
Pcdhb18-201ENSMUST00000055949 2310061N02RikQ9D6S9 174 aa7.37□□□□□ -1.23
Pcdhb18-201ENSMUST00000055949 FcgbpE9Q0B5 2583 aa7.36□□□□□ -1.23
Pcdhb18-201ENSMUST00000055949 Fbn2Q61555 2907 aa7.36□□□□□ -1.23
Pcdhb18-201ENSMUST00000055949 Tnp2P11378 117 aa7.34□□□□□ -1.23
Pcdhb18-201ENSMUST00000055949 Col12a1Q60847 3120 aa7.31□□□□□ -1.24
Pcdhb18-201ENSMUST00000055949 Nbeal2Q6ZQA0 2742 aa7.3□□□□□ -1.24
Pcdhb18-201ENSMUST00000055949 Cfap54Q8C6S9 3106 aa7.3□□□□□ -1.24
Pcdhb18-201ENSMUST00000055949 MgaA2AWL7 3003 aaKnown RBP7.28□□□□□ -1.24
Pcdhb18-201ENSMUST00000055949 Gm9507D3Z5T3 223 aa7.28□□□□□ -1.24
Pcdhb18-201ENSMUST00000055949 Ranbp2Q9ERU9 3053 aaKnown RBP7.27□□□□□ -1.25
Pcdhb18-201ENSMUST00000055949 HttP42859 3119 aa7.22□□□□□ -1.25
Pcdhb18-201ENSMUST00000055949 KalrnA2CG49 2964 aa7.19□□□□□ -1.26
Pcdhb18-201ENSMUST00000055949 Hivep1Q03172 2688 aa7.18□□□□□ -1.26
Pcdhb18-201ENSMUST00000055949 Tex15F8VPN2 2785 aa7.17□□□□□ -1.26
Pcdhb18-201ENSMUST00000055949 Rev3lQ61493 3122 aa7.15□□□□□ -1.26
Pcdhb18-201ENSMUST00000055949 Muc2Q80Z19 2680 aa7.14□□□□□ -1.27
Pcdhb18-201ENSMUST00000055949 Krtap10-4Q08EG8 221 aa7.13□□□□□ -1.27
Pcdhb18-201ENSMUST00000055949 Frem2Q6NVD0 3160 aa7.11□□□□□ -1.27
Pcdhb18-201ENSMUST00000055949 D6Ertd527eA0A0N4SWI3 464 aa7.11□□□□□ -1.27
Pcdhb18-201ENSMUST00000055949 Gm21887J3QQ04 176 aa7.11□□□□□ -1.27
Pcdhb18-201ENSMUST00000055949 Itpr2Q9Z329 2701 aa7.08□□□□□ -1.28
Pcdhb18-201ENSMUST00000055949 Vps13aQ5H8C4 3166 aa7.07□□□□□ -1.28
Pcdhb18-201ENSMUST00000055949 Krtap10-10A0A1W2P7T6 217 aa7.06□□□□□ -1.28
Pcdhb18-201ENSMUST00000055949 Celsr1O35161 3034 aa7.04□□□□□ -1.28
Pcdhb18-201ENSMUST00000055949 Tnp1P10856 55 aa7.03□□□□□ -1.28
Pcdhb18-201ENSMUST00000055949 TgO08710 2766 aa7.02□□□□□ -1.29
Pcdhb18-201ENSMUST00000055949 AtmQ62388 3066 aa7.01□□□□□ -1.29
Pcdhb18-201ENSMUST00000055949 AspmQ8CJ27 3122 aa7.01□□□□□ -1.29
Pcdhb18-201ENSMUST00000055949 Gm40193A0A1B0GT39 78 aa6.98□□□□□ -1.29
Pcdhb18-201ENSMUST00000055949 A930033H14RikG5E8X6 103 aa6.97□□□□□ -1.29
Pcdhb18-201ENSMUST00000055949 Unc80Q8BLN6 3261 aa6.96□□□□□ -1.3
Pcdhb18-201ENSMUST00000055949 Utp20Q5XG71 2788 aaKnown RBP6.95□□□□□ -1.3
Pcdhb18-201ENSMUST00000055949 Gm5965D3Z724 196 aa6.93□□□□□ -1.3
Pcdhb18-201ENSMUST00000055949 Srrm2Q8BTI8 2703 aaKnown RBP6.92□□□□□ -1.3
Pcdhb18-201ENSMUST00000055949 ApcQ61315 2845 aa6.92□□□□□ -1.3
Pcdhb18-201ENSMUST00000055949 Szt2A2A9C3 3431 aa6.92□□□□□ -1.3
Pcdhb18-201ENSMUST00000055949 Cdh23Q99PF4 3354 aa6.91□□□□□ -1.3
Pcdhb18-201ENSMUST00000055949 Gm2696A0A1W2P709 240 aa6.91□□□□□ -1.3
Pcdhb18-201ENSMUST00000055949 Igfn1Q3KNY0 2849 aa6.9□□□□□ -1.3
Pcdhb18-201ENSMUST00000055949 BptfA2A654 3036 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms