RNA–Protein interactions for RNA: ENSMUST00000055949.3

Pcdhb18-201, Transcript of Protocadherin beta-18, mousemouse

APPRIS P1 BASIC

Gene Pcdhb18, Length 5,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18-201ENSMUST00000055949 Rhox8Q6VSS7 320 aa22.79■■□□□ 1.24
Pcdhb18-201ENSMUST00000055949 Rpgrip1Q9EPQ2 1331 aa20.46■□□□□ 0.87
Pcdhb18-201ENSMUST00000055949 Esf1Q3V1V3 845 aaKnown RBP20.33■□□□□ 0.85
Pcdhb18-201ENSMUST00000055949 Zeb1Q64318 1117 aa20.03■□□□□ 0.8
Pcdhb18-201ENSMUST00000055949 Cngb1E1AZ71 1325 aa20.02■□□□□ 0.8
Pcdhb18-201ENSMUST00000055949 Ube2uB1AUC4 352 aa19.99■□□□□ 0.79
Pcdhb18-201ENSMUST00000055949 Trim41Q5NCC3 630 aa19.97■□□□□ 0.79
Pcdhb18-201ENSMUST00000055949 Ccdc136Q3TVA9 1136 aa19.95■□□□□ 0.78
Pcdhb18-201ENSMUST00000055949 Las1lA2BE28 776 aaKnown RBP19.86■□□□□ 0.77
Pcdhb18-201ENSMUST00000055949 Npm2Q80W85 207 aa19.84■□□□□ 0.77
Pcdhb18-201ENSMUST00000055949 Ehmt2Q9Z148 1263 aaKnown RBP19.8■□□□□ 0.76
Pcdhb18-201ENSMUST00000055949 Pelp1Q9DBD5 1123 aaKnown RBP19.69■□□□□ 0.74
Pcdhb18-201ENSMUST00000055949 Wdr66E9Q743 1299 aa19.58■□□□□ 0.73
Pcdhb18-201ENSMUST00000055949 Gab3Q8BSM5 595 aa19.55■□□□□ 0.72
Pcdhb18-201ENSMUST00000055949 Myt1lP97500 1187 aa19.44■□□□□ 0.7
Pcdhb18-201ENSMUST00000055949 NischQ80TM9 1593 aa19.31■□□□□ 0.68
Pcdhb18-201ENSMUST00000055949 Stra8P70278 393 aa19.05■□□□□ 0.64
Pcdhb18-201ENSMUST00000055949 NefmP08553 848 aa18.95■□□□□ 0.62
Pcdhb18-201ENSMUST00000055949 Il27Q8K3I6 234 aa18.91■□□□□ 0.62
Pcdhb18-201ENSMUST00000055949 Acin1Q9JIX8 1338 aaKnown RBP18.87■□□□□ 0.61
Pcdhb18-201ENSMUST00000055949 UbtfP25976 765 aaKnown RBP18.8■□□□□ 0.6
Pcdhb18-201ENSMUST00000055949 Anp32bQ9EST5 272 aaKnown RBP18.8■□□□□ 0.6
Pcdhb18-201ENSMUST00000055949 CenpbP27790 599 aa18.72■□□□□ 0.59
Pcdhb18-201ENSMUST00000055949 HrcG5E8J6 738 aa18.63■□□□□ 0.57
Pcdhb18-201ENSMUST00000055949 Os9Q8K2C7 672 aa18.57■□□□□ 0.56
Pcdhb18-201ENSMUST00000055949 NrdcQ8BHG1 1161 aa18.48■□□□□ 0.55
Pcdhb18-201ENSMUST00000055949 Slc24a1Q91WD8 1130 aa18.48■□□□□ 0.55
Pcdhb18-201ENSMUST00000055949 NclP09405 707 aaKnown RBP18.47■□□□□ 0.55
Pcdhb18-201ENSMUST00000055949 Fam50aQ9WV03 339 aaKnown RBP18.46■□□□□ 0.55
Pcdhb18-201ENSMUST00000055949 Zcchc6Q5BLK4 1491 aaKnown RBP18.45■□□□□ 0.54
Pcdhb18-201ENSMUST00000055949 Npm1Q61937 292 aaKnown RBP18.41■□□□□ 0.54
Pcdhb18-201ENSMUST00000055949 Abcc9P70170 1546 aa18.39■□□□□ 0.53
Pcdhb18-201ENSMUST00000055949 Amer1Q7TS75 1132 aa18.36■□□□□ 0.53
Pcdhb18-201ENSMUST00000055949 NeflP08551 543 aa18.34■□□□□ 0.53
Pcdhb18-201ENSMUST00000055949 Pcgf6Q99NA9 353 aa18.3■□□□□ 0.52
Pcdhb18-201ENSMUST00000055949 Ccdc180J3QNE4 1664 aa18.3■□□□□ 0.52
Pcdhb18-201ENSMUST00000055949 Ap3b1Q9Z1T1 1105 aa18.29■□□□□ 0.52
Pcdhb18-201ENSMUST00000055949 Neurod1Q60867 357 aa18.28■□□□□ 0.52
Pcdhb18-201ENSMUST00000055949 Gm13697A2AK42 830 aa18.26■□□□□ 0.51
Pcdhb18-201ENSMUST00000055949 Cdk11bP24788 784 aaKnown RBP18.23■□□□□ 0.51
Pcdhb18-201ENSMUST00000055949 4930567H17RikQ3V0K5 233 aa18.22■□□□□ 0.51
Pcdhb18-201ENSMUST00000055949 Hdac5Q9Z2V6 1113 aa18.21■□□□□ 0.51
Pcdhb18-201ENSMUST00000055949 Tnnt3Q9QZ47 272 aa18.2■□□□□ 0.5
Pcdhb18-201ENSMUST00000055949 Myt1Q8CFC2 1127 aa18.14■□□□□ 0.5
Pcdhb18-201ENSMUST00000055949 Gm35339A0A140LHH9 1649 aa18.07■□□□□ 0.48
Pcdhb18-201ENSMUST00000055949 Hnrnpul2Q00PI9 745 aaKnown RBP18.04■□□□□ 0.48
Pcdhb18-201ENSMUST00000055949 Rtl1Q7M732 1744 aa18.03■□□□□ 0.48
Pcdhb18-201ENSMUST00000055949 Nop58Q6DFW4 536 aaKnown RBP18.01■□□□□ 0.47
Pcdhb18-201ENSMUST00000055949 TonslQ6NZL6 1363 aa17.95■□□□□ 0.46
Pcdhb18-201ENSMUST00000055949 Supt5hO55201 1082 aaKnown RBP17.91■□□□□ 0.46
Pcdhb18-201ENSMUST00000055949 Gm13695A2AK44 830 aa17.9■□□□□ 0.46
Pcdhb18-201ENSMUST00000055949 Ifnlr1Q8CGK5 535 aa17.89■□□□□ 0.45
Pcdhb18-201ENSMUST00000055949 Zbtb7cQ8VCZ7 619 aa17.88■□□□□ 0.45
Pcdhb18-201ENSMUST00000055949 Ttbk1Q6PCN3 1308 aa17.87■□□□□ 0.45
Pcdhb18-201ENSMUST00000055949 Atp1b4Q99ME6 356 aa17.86■□□□□ 0.45
Pcdhb18-201ENSMUST00000055949 4933416C03RikQ3V063 378 aa17.86■□□□□ 0.45
Pcdhb18-201ENSMUST00000055949 Eif5bQ05D44 1216 aaKnown RBP17.86■□□□□ 0.45
Pcdhb18-201ENSMUST00000055949 Lmod2Q3UHZ5 550 aa17.86■□□□□ 0.45
Pcdhb18-201ENSMUST00000055949 Erich6D3Z6S9 713 aa17.77■□□□□ 0.44
Pcdhb18-201ENSMUST00000055949 DiexfQ8BTT6 772 aaKnown RBP17.76■□□□□ 0.43
Pcdhb18-201ENSMUST00000055949 Ppargc1bQ8VHJ7 1014 aa17.75■□□□□ 0.43
Pcdhb18-201ENSMUST00000055949 Nlrp6Q91WS2 869 aa17.73■□□□□ 0.43
Pcdhb18-201ENSMUST00000055949 Ccer2J3QPU5 274 aa17.69■□□□□ 0.42
Pcdhb18-201ENSMUST00000055949 Brd4Q9ESU6 1400 aaKnown RBP17.69■□□□□ 0.42
Pcdhb18-201ENSMUST00000055949 Ubl4bQ9CQ84 188 aa17.67■□□□□ 0.42
Pcdhb18-201ENSMUST00000055949 Rtl5Q5DTT4 599 aa17.65■□□□□ 0.42
Pcdhb18-201ENSMUST00000055949 Fkbp15Q6P9Q6 1216 aaKnown RBP17.64■□□□□ 0.41
Pcdhb18-201ENSMUST00000055949 Chic1Q8CBW7 227 aa17.63■□□□□ 0.41
Pcdhb18-201ENSMUST00000055949 Clstn2Q9ER65 966 aa17.62■□□□□ 0.41
Pcdhb18-201ENSMUST00000055949 Mier1Q5UAK0 511 aa17.6■□□□□ 0.41
Pcdhb18-201ENSMUST00000055949 Plekhg3Q4VAC9 1341 aa17.6■□□□□ 0.41
Pcdhb18-201ENSMUST00000055949 Safb2Q80YR5 991 aaKnown RBP17.56■□□□□ 0.4
Pcdhb18-201ENSMUST00000055949 Plppr3Q7TPB0 716 aa17.52■□□□□ 0.39
Pcdhb18-201ENSMUST00000055949 Clip1Q922J3 1391 aa17.47■□□□□ 0.39
Pcdhb18-201ENSMUST00000055949 ClspnQ80YR7 1315 aa17.45■□□□□ 0.38
Pcdhb18-201ENSMUST00000055949 Zbtb4Q5F293 982 aa17.43■□□□□ 0.38
Pcdhb18-201ENSMUST00000055949 Abcc8B2RUS7 1588 aa17.41■□□□□ 0.38
Pcdhb18-201ENSMUST00000055949 Polr3glQ8R0C0 218 aa17.39■□□□□ 0.37
Pcdhb18-201ENSMUST00000055949 Upf2A2AT37 1269 aaKnown RBP17.36■□□□□ 0.37
Pcdhb18-201ENSMUST00000055949 Anp32aO35381 247 aa17.36■□□□□ 0.37
Pcdhb18-201ENSMUST00000055949 Prdm10Q3UTQ7 1184 aa17.36■□□□□ 0.37
Pcdhb18-201ENSMUST00000055949 Anks4bQ8K3X6 423 aa17.22■□□□□ 0.35
Pcdhb18-201ENSMUST00000055949 Sall2Q9QX96 1004 aa17.2■□□□□ 0.34
Pcdhb18-201ENSMUST00000055949 Cep164Q5DU05 1446 aa17.18■□□□□ 0.34
Pcdhb18-201ENSMUST00000055949 Zfp777B9EKF4 885 aa17.18■□□□□ 0.34
Pcdhb18-201ENSMUST00000055949 DaxxO35613 739 aa17.16■□□□□ 0.34
Pcdhb18-201ENSMUST00000055949 Eid3Q3V124 375 aa17.15■□□□□ 0.34
Pcdhb18-201ENSMUST00000055949 Rsf1E9PWW9 1441 aaKnown RBP17.14■□□□□ 0.33
Pcdhb18-201ENSMUST00000055949 P3h3Q8CG70 732 aa17.14■□□□□ 0.33
Pcdhb18-201ENSMUST00000055949 Csrnp3P59055 597 aa17.14■□□□□ 0.33
Pcdhb18-201ENSMUST00000055949 Dcaf1Q80TR8 1506 aa17.14■□□□□ 0.33
Pcdhb18-201ENSMUST00000055949 BlmO88700 1416 aa17.13■□□□□ 0.33
Pcdhb18-201ENSMUST00000055949 IqubQ8CDK3 788 aa17.12■□□□□ 0.33
Pcdhb18-201ENSMUST00000055949 Aplp2Q06335 707 aa17.11■□□□□ 0.33
Pcdhb18-201ENSMUST00000055949 Gm38655A0A286YDK6 273 aa17.11■□□□□ 0.33
Pcdhb18-201ENSMUST00000055949 Hsp90aa1P07901 733 aaKnown RBP17.11■□□□□ 0.33
Pcdhb18-201ENSMUST00000055949 Chic2Q9D9G3 165 aa17.1■□□□□ 0.33
Pcdhb18-201ENSMUST00000055949 Fgd1P52734 960 aa17.1■□□□□ 0.33
Pcdhb18-201ENSMUST00000055949 Ercc6F8VPZ5 1481 aa17.09■□□□□ 0.33
Pcdhb18-201ENSMUST00000055949 Mapk8ip2Q9ERE9 830 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms