RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Coa6Q8BGD8 79 aa4.67□□□□□ -1.66
Bdnf-201ENSMUST00000053317 Fgf23Q9EPC2 251 aa4.67□□□□□ -1.66
Bdnf-201ENSMUST00000053317 Igkv3-10A0A0G2JGN0 119 aa4.67□□□□□ -1.66
Bdnf-201ENSMUST00000053317 Dnah14A0A140LIJ4 4489 aa4.66□□□□□ -1.66
Bdnf-201ENSMUST00000053317 Plac8l1Q08EJ0 177 aa4.66□□□□□ -1.66
Bdnf-201ENSMUST00000053317 SmcpP15265 143 aa4.65□□□□□ -1.66
Bdnf-201ENSMUST00000053317 Gm11213A0A1B0GR83 88 aa4.65□□□□□ -1.67
Bdnf-201ENSMUST00000053317 P84750 121 aa4.65□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Bean1Q9EQG5 255 aa4.65□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Ifitm6A0A1B0GS75 124 aa4.65□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Tcl1b3P56842 122 aa4.64□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Gm2696A0A1W2P709 240 aa4.64□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Wfdc13Q5DQQ6 81 aa4.64□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Igkv3-5A0A140T8M6 119 aa4.63□□□□□ -1.67
Bdnf-201ENSMUST00000053317 E130208F15RikQ3UPV3 143 aa4.63□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Cdc42se2Q8BGH7 84 aa4.63□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Sostdc1Q9CQN4 206 aa4.63□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Gm10549Q3URY4 149 aa4.63□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Ighv2-9A0A075B5Q5 116 aa4.63□□□□□ -1.67
Bdnf-201ENSMUST00000053317 2310034G01RikA0A286YDL3 209 aa4.62□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Igkv3-3A0A140T8Q0 119 aa4.62□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Gm10772F7AIG4 85 aa4.61□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Gm10837Q3UTT8 145 aa4.6□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Odf3l2Q3TZ65 277 aa4.6□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Sprr2jO70561 109 aa4.6□□□□□ -1.67
Bdnf-201ENSMUST00000053317 BC025920Q3US60 128 aa4.6□□□□□ -1.67
Bdnf-201ENSMUST00000053317 Defb37Q7TMD2 62 aa4.59□□□□□ -1.68
Bdnf-201ENSMUST00000053317 CrygaP04345 174 aa4.58□□□□□ -1.68
Bdnf-201ENSMUST00000053317 SycnQ8VCK7 134 aa4.58□□□□□ -1.68
Bdnf-201ENSMUST00000053317 AW011738F6S7Q2 159 aa4.58□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Wfdc3Q14AE4 130 aa4.58□□□□□ -1.68
Bdnf-201ENSMUST00000053317 RetnlbQ99P86 105 aa4.58□□□□□ -1.68
Bdnf-201ENSMUST00000053317 3110070M22RikQ9DAQ7 118 aa4.58□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Krtap11-1E9Q2E9 183 aa4.57□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Ighv1-56A0A0A6YXG2 117 aa4.57□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Csmd3Q80T79 3707 aa4.57□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Igkv3-4A0A140T8Q4 119 aa4.57□□□□□ -1.68
Bdnf-201ENSMUST00000053317 2310061N02RikQ9D6S9 174 aa4.57□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Eif4ebp3Q80VV3 101 aa4.56□□□□□ -1.68
Bdnf-201ENSMUST00000053317 AI606181Q8C7B9 129 aa4.56□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Q9DAA7 145 aa4.56□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Gm5617Q91VN2 117 aa4.56□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Krtap13O88375 197 aa4.56□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Igkv8-27A0A0G2JF28 120 aa4.55□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Igkv8-30A0A140T8M3 121 aa4.55□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Gm17689B3GLJ4 109 aa4.55□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Reg3aO09037 175 aa4.55□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Gm9918Q8BUR5 174 aa4.55□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Igkv3-12A0A140T8P0 119 aa4.55□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Gm43218A0A0G2JGT0 114 aa4.54□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Cdc42se1Q8BHL7 80 aa4.54□□□□□ -1.68
Bdnf-201ENSMUST00000053317 A030014E15RikA0A1Y7VJV2 120 aa4.54□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Tcl1b5P56845 121 aa4.54□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Fras1Q80T14 4010 aa4.54□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Adm2Q7TNK8 150 aa4.54□□□□□ -1.68
Bdnf-201ENSMUST00000053317 MobpQ9D2P8 170 aa4.53□□□□□ -1.68
Bdnf-201ENSMUST00000053317 A730009L09RikA0A1B0GS82 72 aa4.53□□□□□ -1.68
Bdnf-201ENSMUST00000053317 Igkv8-21A0A140T8P7 120 aa4.52□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Gm10160F6Y577 67 aa4.52□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Zfand2aQ9JII7 171 aa4.52□□□□□ -1.69
Bdnf-201ENSMUST00000053317 C130032M10RikQ8C888 123 aa4.51□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Ighv2-5A0A0A6YY69 116 aa4.51□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Mrpl34Q99N91 92 aa4.51□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Ighv2-9-1A0A075B697 116 aa4.5□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Msrb1Q9JLC3 116 aa4.5□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Gm9903Q8C9Y8 129 aa4.5□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Dnah6E9Q0B6 4144 aa4.5□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Coa5Q99M07 74 aa4.49□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Gm10308Q9CVR5 141 aa4.49□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Fam229bQ8CF36 80 aa4.49□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Gm44790A0A0N4SV91 103 aa4.49□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Gm21886J3QJU9 214 aa4.48□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Znf414Q9DCK4 299 aa4.48□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Gm20661K7N787 53 aa4.48□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Huwe1Q7TMY8 4377 aaKnown RBP4.47□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Cox6a2P43023 97 aa4.47□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Ighv2-2A0A075B5P8 116 aa4.46□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Gm28230A0A0A0MQ91 144 aa4.46□□□□□ -1.69
Bdnf-201ENSMUST00000053317 P01821 116 aa4.46□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Phxr4P15974 95 aa4.46□□□□□ -1.69
Bdnf-201ENSMUST00000053317 Ryr1E9PZQ0 5035 aa4.46□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Znf706Q9D115 76 aaKnown RBP4.46□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Ryr3A2AGL3 4863 aa4.46□□□□□ -1.7
Bdnf-201ENSMUST00000053317 1700018G05RikA0A1B0GSI2 66 aa4.46□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Fam168bQ80XQ8 194 aa4.46□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Gm10770F7D043 238 aa4.45□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Wfdc6bF6ULY1 148 aa4.45□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Igkv3-7A0A0G2JE31 119 aa4.45□□□□□ -1.7
Bdnf-201ENSMUST00000053317 CnbpP53996 178 aaKnown RBP4.45□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Phf5aP83870 110 aaKnown RBP4.45□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Igkv8-19A0A0G2JFN8 121 aa4.44□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Limd2Q8BGB5 128 aa4.44□□□□□ -1.7
Bdnf-201ENSMUST00000053317 PrkdcP97313 4128 aa4.43□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Rpl37aP61514 92 aa4.43□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Tnp2P11378 117 aa4.42□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Gm10643Q3URG9 111 aa4.42□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Sprr4Q8CGN8 76 aa4.42□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Gm10642Q3TWM1 71 aa4.41□□□□□ -1.7
Bdnf-201ENSMUST00000053317 Chchd10Q7TNL9 138 aa4.41□□□□□ -1.7
Bdnf-201ENSMUST00000053317 PlecQ9QXS1 4691 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms