RNA–Protein interactions for RNA: ENSMUST00000035340.13

Usp54-202, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-202ENSMUST00000035340 Gm3880A0A1B0GSB3 72 aa4.59□□□□□ -1.68
Usp54-202ENSMUST00000035340 Gm9195A0A140LHT4 2805 aa4.59□□□□□ -1.68
Usp54-202ENSMUST00000035340 Hectd1Q69ZR2 2618 aaKnown RBP4.58□□□□□ -1.68
Usp54-202ENSMUST00000035340 Gm37013Q8K491 104 aa4.57□□□□□ -1.68
Usp54-202ENSMUST00000035340 Nsd1O88491 2588 aaKnown RBP4.56□□□□□ -1.68
Usp54-202ENSMUST00000035340 Notch1Q01705 2531 aa4.56□□□□□ -1.68
Usp54-202ENSMUST00000035340 2310050C09RikG5E8Z3 280 aa4.56□□□□□ -1.68
Usp54-202ENSMUST00000035340 Nbeal1E9PYP2 2688 aa4.56□□□□□ -1.68
Usp54-202ENSMUST00000035340 Krtap13O88375 197 aa4.53□□□□□ -1.69
Usp54-202ENSMUST00000035340 2310061N02RikQ9D6S9 174 aa4.52□□□□□ -1.69
Usp54-202ENSMUST00000035340 Rpl37Q9D823 97 aa4.52□□□□□ -1.69
Usp54-202ENSMUST00000035340 Dnah12Q3V0Q1 3086 aa4.52□□□□□ -1.69
Usp54-202ENSMUST00000035340 A730071L15RikQ8C4X0 137 aa4.5□□□□□ -1.69
Usp54-202ENSMUST00000035340 Tnp2P11378 117 aa4.5□□□□□ -1.69
Usp54-202ENSMUST00000035340 Gm9508A0A1W2P7W0 230 aa4.5□□□□□ -1.69
Usp54-202ENSMUST00000035340 HttP42859 3119 aa4.49□□□□□ -1.69
Usp54-202ENSMUST00000035340 Krtap14O08640 167 aa4.48□□□□□ -1.69
Usp54-202ENSMUST00000035340 CenpfE9Q3P4 2997 aaKnown RBP4.48□□□□□ -1.69
Usp54-202ENSMUST00000035340 Alms1Q8K4E0 3251 aa4.47□□□□□ -1.69
Usp54-202ENSMUST00000035340 Fn1P11276 2477 aaKnown RBP4.46□□□□□ -1.7
Usp54-202ENSMUST00000035340 Romo1P60603 79 aa4.45□□□□□ -1.7
Usp54-202ENSMUST00000035340 Stab1Q8R4Y4 2571 aa4.45□□□□□ -1.7
Usp54-202ENSMUST00000035340 Gcn1E9PVA8 2671 aaKnown RBP4.45□□□□□ -1.7
Usp54-202ENSMUST00000035340 Usp24B1AY13 2617 aaKnown RBP4.45□□□□□ -1.7
Usp54-202ENSMUST00000035340 Akap13E9Q394 2776 aa4.45□□□□□ -1.7
Usp54-202ENSMUST00000035340 Gm2310J3QNJ2 377 aa4.44□□□□□ -1.7
Usp54-202ENSMUST00000035340 Gm9507D3Z5T3 223 aa4.42□□□□□ -1.7
Usp54-202ENSMUST00000035340 Cep350E9Q309 3095 aa4.41□□□□□ -1.7
Usp54-202ENSMUST00000035340 PcntP48725 2898 aa4.41□□□□□ -1.7
Usp54-202ENSMUST00000035340 Cox6b2Q80ZN9 88 aa4.41□□□□□ -1.7
Usp54-202ENSMUST00000035340 Dmbt1Q60997 2085 aa4.41□□□□□ -1.7
Usp54-202ENSMUST00000035340 TrioQ0KL02 3102 aa4.41□□□□□ -1.7
Usp54-202ENSMUST00000035340 Col12a1Q60847 3120 aa4.4□□□□□ -1.7
Usp54-202ENSMUST00000035340 Cdh23Q99PF4 3354 aa4.4□□□□□ -1.71
Usp54-202ENSMUST00000035340 Szt2A2A9C3 3431 aa4.4□□□□□ -1.71
Usp54-202ENSMUST00000035340 Rev3lQ61493 3122 aa4.39□□□□□ -1.71
Usp54-202ENSMUST00000035340 D6Ertd527eA0A0N4SWI3 464 aa4.39□□□□□ -1.71
Usp54-202ENSMUST00000035340 Mast4Q811L6 2618 aa4.37□□□□□ -1.71
Usp54-202ENSMUST00000035340 Jbts17Q8CE72 3214 aa4.37□□□□□ -1.71
Usp54-202ENSMUST00000035340 Cystm1Q8K353 104 aa4.37□□□□□ -1.71
Usp54-202ENSMUST00000035340 Igsf10Q3V1M1 2594 aa4.36□□□□□ -1.71
Usp54-202ENSMUST00000035340 Myo15bI7HPW8 3033 aa4.36□□□□□ -1.71
Usp54-202ENSMUST00000035340 Gm3646F6S692 53 aa4.35□□□□□ -1.71
Usp54-202ENSMUST00000035340 Gm10382Q3V0T5 144 aa4.35□□□□□ -1.71
Usp54-202ENSMUST00000035340 Gm7173A0A0G2JEB6 3132 aa4.34□□□□□ -1.71
Usp54-202ENSMUST00000035340 NipblQ6KCD5 2798 aaKnown RBP4.33□□□□□ -1.72
Usp54-202ENSMUST00000035340 Itpr3P70227 2670 aa4.3□□□□□ -1.72
Usp54-202ENSMUST00000035340 Krtap10-4Q08EG8 221 aa4.29□□□□□ -1.72
Usp54-202ENSMUST00000035340 Itpr1P11881 2749 aa4.29□□□□□ -1.72
Usp54-202ENSMUST00000035340 Prune2Q52KR3 3084 aa4.28□□□□□ -1.72
Usp54-202ENSMUST00000035340 Tep1P97499 2629 aa4.26□□□□□ -1.73
Usp54-202ENSMUST00000035340 Unc80Q8BLN6 3261 aa4.25□□□□□ -1.73
Usp54-202ENSMUST00000035340 Krtap10-10A0A1W2P7T6 217 aa4.25□□□□□ -1.73
Usp54-202ENSMUST00000035340 A930033H14RikG5E8X6 103 aa4.25□□□□□ -1.73
Usp54-202ENSMUST00000035340 Mki67E9PVX6 3177 aaKnown RBP4.24□□□□□ -1.73
Usp54-202ENSMUST00000035340 Stab2Q8R4U0 2559 aa4.23□□□□□ -1.73
Usp54-202ENSMUST00000035340 Gm21887J3QQ04 176 aa4.23□□□□□ -1.73
Usp54-202ENSMUST00000035340 9530053A07RikE9PVG8 2581 aa4.23□□□□□ -1.73
Usp54-202ENSMUST00000035340 4933415A04RikQ9D443 101 aa4.23□□□□□ -1.73
Usp54-202ENSMUST00000035340 Chd7A2AJK6 2986 aaKnown RBP4.21□□□□□ -1.74
Usp54-202ENSMUST00000035340 MgaA2AWL7 3003 aaKnown RBP4.19□□□□□ -1.74
Usp54-202ENSMUST00000035340 Gm2696A0A1W2P709 240 aa4.18□□□□□ -1.74
Usp54-202ENSMUST00000035340 Kmt2bO08550 2713 aa4.18□□□□□ -1.74
Usp54-202ENSMUST00000035340 Vps13aQ5H8C4 3166 aa4.18□□□□□ -1.74
Usp54-202ENSMUST00000035340 Col6a3E9PWQ3 3284 aa4.17□□□□□ -1.74
Usp54-202ENSMUST00000035340 Gm40193A0A1B0GT39 78 aa4.16□□□□□ -1.74
Usp54-202ENSMUST00000035340 Gm5965D3Z724 196 aa4.16□□□□□ -1.74
Usp54-202ENSMUST00000035340 Tnrc18Q80WC3 2878 aa4.16□□□□□ -1.74
Usp54-202ENSMUST00000035340 Tnp1P10856 55 aa4.15□□□□□ -1.74
Usp54-202ENSMUST00000035340 HrnrQ8VHD8 2496 aa4.15□□□□□ -1.75
Usp54-202ENSMUST00000035340 1700042G07RikB1AUF7 90 aa4.15□□□□□ -1.75
Usp54-202ENSMUST00000035340 FcgbpE9Q0B5 2583 aa4.15□□□□□ -1.75
Usp54-202ENSMUST00000035340 Chd6A3KFM7 2711 aa4.14□□□□□ -1.75
Usp54-202ENSMUST00000035340 Map1aQ9QYR6 2776 aa4.12□□□□□ -1.75
Usp54-202ENSMUST00000035340 Gm17416Q30KP4 66 aa4.1□□□□□ -1.75
Usp54-202ENSMUST00000035340 AspmQ8CJ27 3122 aa4.09□□□□□ -1.75
Usp54-202ENSMUST00000035340 Pkd1l1Q8R526 2615 aa4.09□□□□□ -1.75
Usp54-202ENSMUST00000035340 KalrnA2CG49 2964 aa4.09□□□□□ -1.75
Usp54-202ENSMUST00000035340 Itpr2Q9Z329 2701 aa4.09□□□□□ -1.76
Usp54-202ENSMUST00000035340 2310057N15RikQ9D6T8 200 aa4.09□□□□□ -1.76
Usp54-202ENSMUST00000035340 Ubr5Q80TP3 2792 aa4.08□□□□□ -1.76
Usp54-202ENSMUST00000035340 Wdfy3Q6VNB8 3508 aa4.08□□□□□ -1.76
Usp54-202ENSMUST00000035340 AtmQ62388 3066 aa4.07□□□□□ -1.76
Usp54-202ENSMUST00000035340 Dmxl1Q6PNC0 3013 aa4.07□□□□□ -1.76
Usp54-202ENSMUST00000035340 Col6a5A6H584 2640 aa4.07□□□□□ -1.76
Usp54-202ENSMUST00000035340 Nbeal2Q6ZQA0 2742 aa4.06□□□□□ -1.76
Usp54-202ENSMUST00000035340 Bod1lE9Q6J5 3032 aa4.06□□□□□ -1.76
Usp54-202ENSMUST00000035340 Muc2Q80Z19 2680 aa4.06□□□□□ -1.76
Usp54-202ENSMUST00000035340 Hivep1Q03172 2688 aa4.06□□□□□ -1.76
Usp54-202ENSMUST00000035340 FryE9Q8I9 3020 aa4.05□□□□□ -1.76
Usp54-202ENSMUST00000035340 Lrrc37aB1AWG4 3215 aa4.04□□□□□ -1.76
Usp54-202ENSMUST00000035340 Tenm4Q3UHK6 2771 aa4.04□□□□□ -1.76
Usp54-202ENSMUST00000035340 Prrc2cQ3TLH4 2846 aaKnown RBP4.01□□□□□ -1.77
Usp54-202ENSMUST00000035340 Frem2Q6NVD0 3160 aa4□□□□□ -1.77
Usp54-202ENSMUST00000035340 Wdfy4E9Q2M9 3149 aa4□□□□□ -1.77
Usp54-202ENSMUST00000035340 BptfA2A654 3036 aaKnown RBP3.99□□□□□ -1.77
Usp54-202ENSMUST00000035340 Brca2P97929 3329 aa3.99□□□□□ -1.77
Usp54-202ENSMUST00000035340 Gm17402F6Z0L5 76 aa3.99□□□□□ -1.77
Usp54-202ENSMUST00000035340 SmcpP15265 143 aa3.99□□□□□ -1.77
Usp54-202ENSMUST00000035340 Fbn2Q61555 2907 aa3.98□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms