RNA–Protein interactions for RNA: ENSMUST00000035340.13

Usp54-202, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-202ENSMUST00000035340 Rhox8Q6VSS7 320 aa13.8□□□□□ -0.2
Usp54-202ENSMUST00000035340 Esf1Q3V1V3 845 aaKnown RBP12.38□□□□□ -0.43
Usp54-202ENSMUST00000035340 Rpgrip1Q9EPQ2 1331 aa12.31□□□□□ -0.44
Usp54-202ENSMUST00000035340 NischQ80TM9 1593 aa12.27□□□□□ -0.45
Usp54-202ENSMUST00000035340 Trim41Q5NCC3 630 aa12.24□□□□□ -0.45
Usp54-202ENSMUST00000035340 Cngb1E1AZ71 1325 aa12.2□□□□□ -0.46
Usp54-202ENSMUST00000035340 Ccdc136Q3TVA9 1136 aa12.13□□□□□ -0.47
Usp54-202ENSMUST00000035340 Zeb1Q64318 1117 aa12.12□□□□□ -0.47
Usp54-202ENSMUST00000035340 Npm2Q80W85 207 aa12.05□□□□□ -0.48
Usp54-202ENSMUST00000035340 Ube2uB1AUC4 352 aa11.98□□□□□ -0.49
Usp54-202ENSMUST00000035340 Las1lA2BE28 776 aaKnown RBP11.95□□□□□ -0.5
Usp54-202ENSMUST00000035340 Gab3Q8BSM5 595 aa11.81□□□□□ -0.52
Usp54-202ENSMUST00000035340 Myt1lP97500 1187 aa11.75□□□□□ -0.53
Usp54-202ENSMUST00000035340 Wdr66E9Q743 1299 aa11.7□□□□□ -0.54
Usp54-202ENSMUST00000035340 Pelp1Q9DBD5 1123 aaKnown RBP11.68□□□□□ -0.54
Usp54-202ENSMUST00000035340 Ehmt2Q9Z148 1263 aaKnown RBP11.68□□□□□ -0.54
Usp54-202ENSMUST00000035340 Abcc9P70170 1546 aa11.54□□□□□ -0.56
Usp54-202ENSMUST00000035340 Il27Q8K3I6 234 aa11.5□□□□□ -0.57
Usp54-202ENSMUST00000035340 Zcchc6Q5BLK4 1491 aaKnown RBP11.48□□□□□ -0.57
Usp54-202ENSMUST00000035340 NefmP08553 848 aa11.48□□□□□ -0.57
Usp54-202ENSMUST00000035340 HrcG5E8J6 738 aa11.47□□□□□ -0.57
Usp54-202ENSMUST00000035340 Stra8P70278 393 aa11.46□□□□□ -0.57
Usp54-202ENSMUST00000035340 Ccdc180J3QNE4 1664 aa11.45□□□□□ -0.58
Usp54-202ENSMUST00000035340 Rtl1Q7M732 1744 aa11.4□□□□□ -0.58
Usp54-202ENSMUST00000035340 UbtfP25976 765 aaKnown RBP11.35□□□□□ -0.59
Usp54-202ENSMUST00000035340 Anp32bQ9EST5 272 aaKnown RBP11.32□□□□□ -0.6
Usp54-202ENSMUST00000035340 Npm1Q61937 292 aaKnown RBP11.3□□□□□ -0.6
Usp54-202ENSMUST00000035340 Gm35339A0A140LHH9 1649 aa11.28□□□□□ -0.6
Usp54-202ENSMUST00000035340 NclP09405 707 aaKnown RBP11.22□□□□□ -0.61
Usp54-202ENSMUST00000035340 Acin1Q9JIX8 1338 aaKnown RBP11.2□□□□□ -0.62
Usp54-202ENSMUST00000035340 Abcc8B2RUS7 1588 aa11.18□□□□□ -0.62
Usp54-202ENSMUST00000035340 Os9Q8K2C7 672 aa11.18□□□□□ -0.62
Usp54-202ENSMUST00000035340 Fam50aQ9WV03 339 aaKnown RBP11.16□□□□□ -0.62
Usp54-202ENSMUST00000035340 Hdac5Q9Z2V6 1113 aa11.15□□□□□ -0.62
Usp54-202ENSMUST00000035340 Ap3b1Q9Z1T1 1105 aa11.11□□□□□ -0.63
Usp54-202ENSMUST00000035340 NrdcQ8BHG1 1161 aa11.1□□□□□ -0.63
Usp54-202ENSMUST00000035340 Brd4Q9ESU6 1400 aaKnown RBP11.07□□□□□ -0.64
Usp54-202ENSMUST00000035340 Gm13697A2AK42 830 aa11.05□□□□□ -0.64
Usp54-202ENSMUST00000035340 CenpbP27790 599 aa11.03□□□□□ -0.64
Usp54-202ENSMUST00000035340 Slc24a1Q91WD8 1130 aa11.01□□□□□ -0.65
Usp54-202ENSMUST00000035340 NeflP08551 543 aa10.99□□□□□ -0.65
Usp54-202ENSMUST00000035340 Neurod1Q60867 357 aa10.97□□□□□ -0.65
Usp54-202ENSMUST00000035340 Tnnt3Q9QZ47 272 aa10.96□□□□□ -0.66
Usp54-202ENSMUST00000035340 Ubl4bQ9CQ84 188 aa10.92□□□□□ -0.66
Usp54-202ENSMUST00000035340 Hnrnpul2Q00PI9 745 aaKnown RBP10.89□□□□□ -0.67
Usp54-202ENSMUST00000035340 TonslQ6NZL6 1363 aa10.89□□□□□ -0.67
Usp54-202ENSMUST00000035340 Cdk11bP24788 784 aaKnown RBP10.89□□□□□ -0.67
Usp54-202ENSMUST00000035340 Ttbk1Q6PCN3 1308 aa10.88□□□□□ -0.67
Usp54-202ENSMUST00000035340 NacadQ5SWP3 1504 aa10.85□□□□□ -0.67
Usp54-202ENSMUST00000035340 Ifnlr1Q8CGK5 535 aa10.84□□□□□ -0.67
Usp54-202ENSMUST00000035340 Lmod2Q3UHZ5 550 aa10.83□□□□□ -0.68
Usp54-202ENSMUST00000035340 Gm13695A2AK44 830 aa10.82□□□□□ -0.68
Usp54-202ENSMUST00000035340 Ccer2J3QPU5 274 aa10.82□□□□□ -0.68
Usp54-202ENSMUST00000035340 Rb1cc1Q9ESK9 1588 aa10.81□□□□□ -0.68
Usp54-202ENSMUST00000035340 Atp1b4Q99ME6 356 aa10.78□□□□□ -0.68
Usp54-202ENSMUST00000035340 Ercc6F8VPZ5 1481 aa10.78□□□□□ -0.68
Usp54-202ENSMUST00000035340 Clstn2Q9ER65 966 aa10.77□□□□□ -0.68
Usp54-202ENSMUST00000035340 Zbtb7cQ8VCZ7 619 aa10.77□□□□□ -0.69
Usp54-202ENSMUST00000035340 Erich6D3Z6S9 713 aa10.75□□□□□ -0.69
Usp54-202ENSMUST00000035340 Nop58Q6DFW4 536 aaKnown RBP10.72□□□□□ -0.69
Usp54-202ENSMUST00000035340 Clip1Q922J3 1391 aa10.72□□□□□ -0.69
Usp54-202ENSMUST00000035340 Amer1Q7TS75 1132 aa10.72□□□□□ -0.69
Usp54-202ENSMUST00000035340 Rsf1E9PWW9 1441 aaKnown RBP10.71□□□□□ -0.69
Usp54-202ENSMUST00000035340 Fkbp15Q6P9Q6 1216 aaKnown RBP10.71□□□□□ -0.7
Usp54-202ENSMUST00000035340 Nlrp6Q91WS2 869 aa10.7□□□□□ -0.7
Usp54-202ENSMUST00000035340 Plekhg3Q4VAC9 1341 aa10.7□□□□□ -0.7
Usp54-202ENSMUST00000035340 Cep164Q5DU05 1446 aa10.7□□□□□ -0.7
Usp54-202ENSMUST00000035340 Safb2Q80YR5 991 aaKnown RBP10.69□□□□□ -0.7
Usp54-202ENSMUST00000035340 4930567H17RikQ3V0K5 233 aa10.67□□□□□ -0.7
Usp54-202ENSMUST00000035340 DiexfQ8BTT6 772 aaKnown RBP10.66□□□□□ -0.7
Usp54-202ENSMUST00000035340 Eif5bQ05D44 1216 aaKnown RBP10.66□□□□□ -0.7
Usp54-202ENSMUST00000035340 Mier1Q5UAK0 511 aa10.66□□□□□ -0.7
Usp54-202ENSMUST00000035340 Ccdc18Q640L5 1455 aa10.64□□□□□ -0.71
Usp54-202ENSMUST00000035340 Dcaf1Q80TR8 1506 aa10.61□□□□□ -0.71
Usp54-202ENSMUST00000035340 Kif15Q6P9L6 1387 aa10.6□□□□□ -0.71
Usp54-202ENSMUST00000035340 Baz1aO88379 1555 aa10.59□□□□□ -0.71
Usp54-202ENSMUST00000035340 Rtl5Q5DTT4 599 aa10.58□□□□□ -0.72
Usp54-202ENSMUST00000035340 Chic1Q8CBW7 227 aa10.56□□□□□ -0.72
Usp54-202ENSMUST00000035340 ClspnQ80YR7 1315 aa10.56□□□□□ -0.72
Usp54-202ENSMUST00000035340 Pds5bQ4VA53 1446 aaKnown RBP10.56□□□□□ -0.72
Usp54-202ENSMUST00000035340 4933416C03RikQ3V063 378 aa10.55□□□□□ -0.72
Usp54-202ENSMUST00000035340 Plppr3Q7TPB0 716 aa10.55□□□□□ -0.72
Usp54-202ENSMUST00000035340 Myt1Q8CFC2 1127 aa10.53□□□□□ -0.72
Usp54-202ENSMUST00000035340 BlmO88700 1416 aa10.51□□□□□ -0.73
Usp54-202ENSMUST00000035340 Upf2A2AT37 1269 aaKnown RBP10.51□□□□□ -0.73
Usp54-202ENSMUST00000035340 Golga3P55937 1487 aa10.5□□□□□ -0.73
Usp54-202ENSMUST00000035340 Setd5Q5XJV7 1441 aa10.49□□□□□ -0.73
Usp54-202ENSMUST00000035340 Pcgf6Q99NA9 353 aa10.48□□□□□ -0.73
Usp54-202ENSMUST00000035340 Zfp777B9EKF4 885 aa10.46□□□□□ -0.73
Usp54-202ENSMUST00000035340 Zbtb4Q5F293 982 aa10.45□□□□□ -0.74
Usp54-202ENSMUST00000035340 IqubQ8CDK3 788 aa10.43□□□□□ -0.74
Usp54-202ENSMUST00000035340 Arhgap27A2AB59 869 aa10.41□□□□□ -0.74
Usp54-202ENSMUST00000035340 Polr3glQ8R0C0 218 aa10.41□□□□□ -0.74
Usp54-202ENSMUST00000035340 Chic2Q9D9G3 165 aa10.41□□□□□ -0.74
Usp54-202ENSMUST00000035340 Eea1Q8BL66 1411 aa10.39□□□□□ -0.75
Usp54-202ENSMUST00000035340 Prdm10Q3UTQ7 1184 aa10.39□□□□□ -0.75
Usp54-202ENSMUST00000035340 P3h3Q8CG70 732 aa10.39□□□□□ -0.75
Usp54-202ENSMUST00000035340 Kdm5dQ62240 1548 aa10.38□□□□□ -0.75
Usp54-202ENSMUST00000035340 Ppargc1bQ8VHJ7 1014 aa10.35□□□□□ -0.75
Usp54-202ENSMUST00000035340 Mtus2Q3UHD3 1353 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms