RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Gm10065F6TJM2 114 aa8.84□□□□□ -0.99
Col4a1-201ENSMUST00000033898 Vps13aQ5H8C4 3166 aa8.83□□□□□ -1
Col4a1-201ENSMUST00000033898 Gm36176A0A1W2P8D5 158 aa8.83□□□□□ -1
Col4a1-201ENSMUST00000033898 Fam229aB2KGE5 128 aa8.83□□□□□ -1
Col4a1-201ENSMUST00000033898 Zfhx3Q61329 3726 aa8.82□□□□□ -1
Col4a1-201ENSMUST00000033898 Gm17349F7BGH6 99 aa8.82□□□□□ -1
Col4a1-201ENSMUST00000033898 Abca12E9Q876 2595 aa8.81□□□□□ -1
Col4a1-201ENSMUST00000033898 Frem2Q6NVD0 3160 aa8.79□□□□□ -1
Col4a1-201ENSMUST00000033898 Unc79Q0KK59 2596 aa8.78□□□□□ -1
Col4a1-201ENSMUST00000033898 Odf3bQ5M8M2 238 aa8.78□□□□□ -1
Col4a1-201ENSMUST00000033898 Col6a3E9PWQ3 3284 aa8.75□□□□□ -1.01
Col4a1-201ENSMUST00000033898 Gm10139O88245 57 aa8.73□□□□□ -1.01
Col4a1-201ENSMUST00000033898 AtmQ62388 3066 aa8.72□□□□□ -1.01
Col4a1-201ENSMUST00000033898 Usp24B1AY13 2617 aaKnown RBP8.71□□□□□ -1.01
Col4a1-201ENSMUST00000033898 Gm37013Q8K491 104 aa8.71□□□□□ -1.01
Col4a1-201ENSMUST00000033898 MgaA2AWL7 3003 aaKnown RBP8.7□□□□□ -1.02
Col4a1-201ENSMUST00000033898 Cystm1Q8K353 104 aa8.7□□□□□ -1.02
Col4a1-201ENSMUST00000033898 Zfp292Q9Z2U2 2698 aa8.67□□□□□ -1.02
Col4a1-201ENSMUST00000033898 Myo15aQ9QZZ4 3511 aa8.65□□□□□ -1.02
Col4a1-201ENSMUST00000033898 HrnrQ8VHD8 2496 aa8.64□□□□□ -1.03
Col4a1-201ENSMUST00000033898 Brca2P97929 3329 aa8.63□□□□□ -1.03
Col4a1-201ENSMUST00000033898 Sec61bQ9CQS8 96 aaKnown RBP8.62□□□□□ -1.03
Col4a1-201ENSMUST00000033898 Wdfy3Q6VNB8 3508 aa8.61□□□□□ -1.03
Col4a1-201ENSMUST00000033898 VcanQ62059 3357 aa8.61□□□□□ -1.03
Col4a1-201ENSMUST00000033898 Gm9507D3Z5T3 223 aa8.6□□□□□ -1.03
Col4a1-201ENSMUST00000033898 Gm19426M0QWC7 77 aa8.6□□□□□ -1.03
Col4a1-201ENSMUST00000033898 BptfA2A654 3036 aaKnown RBP8.59□□□□□ -1.03
Col4a1-201ENSMUST00000033898 Gm3646F6S692 53 aa8.59□□□□□ -1.03
Col4a1-201ENSMUST00000033898 Sprr1aQ62266 144 aa8.59□□□□□ -1.04
Col4a1-201ENSMUST00000033898 Krtap13O88375 197 aa8.58□□□□□ -1.04
Col4a1-201ENSMUST00000033898 Ankrd11E9Q4F7 2643 aa8.57□□□□□ -1.04
Col4a1-201ENSMUST00000033898 Cfap54Q8C6S9 3106 aa8.57□□□□□ -1.04
Col4a1-201ENSMUST00000033898 Romo1P60603 79 aa8.57□□□□□ -1.04
Col4a1-201ENSMUST00000033898 Rpl37Q9D823 97 aa8.55□□□□□ -1.04
Col4a1-201ENSMUST00000033898 Myo18bE9PV66 2605 aa8.55□□□□□ -1.04
Col4a1-201ENSMUST00000033898 Gm5767A0A0J9YTU8 78 aa8.54□□□□□ -1.04
Col4a1-201ENSMUST00000033898 AtrQ9JKK8 2635 aa8.54□□□□□ -1.04
Col4a1-201ENSMUST00000033898 SpegQ62407 3262 aa8.54□□□□□ -1.04
Col4a1-201ENSMUST00000033898 Gm16253D3Z167 63 aa8.54□□□□□ -1.04
Col4a1-201ENSMUST00000033898 Krtap10-4Q08EG8 221 aa8.53□□□□□ -1.04
Col4a1-201ENSMUST00000033898 FasnP19096 2504 aaKnown RBP8.49□□□□□ -1.05
Col4a1-201ENSMUST00000033898 Gm10382Q3V0T5 144 aa8.49□□□□□ -1.05
Col4a1-201ENSMUST00000033898 Chd7A2AJK6 2986 aaKnown RBP8.49□□□□□ -1.05
Col4a1-201ENSMUST00000033898 BC029722A0A0N4SW31 51 aa8.48□□□□□ -1.05
Col4a1-201ENSMUST00000033898 2310050C09RikG5E8Z3 280 aa8.48□□□□□ -1.05
Col4a1-201ENSMUST00000033898 A730071L15RikQ8C4X0 137 aa8.47□□□□□ -1.05
Col4a1-201ENSMUST00000033898 Krtap29-1A2A5X4 342 aa8.46□□□□□ -1.06
Col4a1-201ENSMUST00000033898 FrylF8VQ05 3007 aa8.45□□□□□ -1.06
Col4a1-201ENSMUST00000033898 Fn1P11276 2477 aaKnown RBP8.43□□□□□ -1.06
Col4a1-201ENSMUST00000033898 Krtap10-10A0A1W2P7T6 217 aa8.43□□□□□ -1.06
Col4a1-201ENSMUST00000033898 Dchs2A0A0A6YW72 3346 aa8.42□□□□□ -1.06
Col4a1-201ENSMUST00000033898 Lrrc37aB1AWG4 3215 aa8.42□□□□□ -1.06
Col4a1-201ENSMUST00000033898 AspmQ8CJ27 3122 aa8.42□□□□□ -1.06
Col4a1-201ENSMUST00000033898 FlnaQ8BTM8 2647 aaKnown RBP8.41□□□□□ -1.06
Col4a1-201ENSMUST00000033898 Dchs1E9PVD3 3291 aa8.41□□□□□ -1.06
Col4a1-201ENSMUST00000033898 Gm9195A0A140LHT4 2805 aa8.4□□□□□ -1.07
Col4a1-201ENSMUST00000033898 FlnbQ80X90 2602 aaKnown RBP8.39□□□□□ -1.07
Col4a1-201ENSMUST00000033898 Vps13cQ8BX70 3748 aa8.39□□□□□ -1.07
Col4a1-201ENSMUST00000033898 Gcn1E9PVA8 2671 aaKnown RBP8.35□□□□□ -1.07
Col4a1-201ENSMUST00000033898 Lama1P19137 3084 aa8.33□□□□□ -1.08
Col4a1-201ENSMUST00000033898 Dmxl1Q6PNC0 3013 aa8.3□□□□□ -1.08
Col4a1-201ENSMUST00000033898 DmdP11531 3678 aa8.3□□□□□ -1.08
Col4a1-201ENSMUST00000033898 Gm11565A2A4M7 156 aa8.3□□□□□ -1.08
Col4a1-201ENSMUST00000033898 Prrc2cQ3TLH4 2846 aaKnown RBP8.23□□□□□ -1.09
Col4a1-201ENSMUST00000033898 Krtap14O08640 167 aa8.23□□□□□ -1.09
Col4a1-201ENSMUST00000033898 Akap9Q70FJ1 3797 aa8.18□□□□□ -1.1
Col4a1-201ENSMUST00000033898 4933415A04RikQ9D443 101 aa8.18□□□□□ -1.1
Col4a1-201ENSMUST00000033898 Akap13E9Q394 2776 aa8.18□□□□□ -1.1
Col4a1-201ENSMUST00000033898 Notch1Q01705 2531 aa8.18□□□□□ -1.1
Col4a1-201ENSMUST00000033898 Tnrc18Q80WC3 2878 aa8.16□□□□□ -1.1
Col4a1-201ENSMUST00000033898 1700042G07RikB1AUF7 90 aa8.15□□□□□ -1.1
Col4a1-201ENSMUST00000033898 Ash1lQ99MY8 2958 aa8.15□□□□□ -1.1
Col4a1-201ENSMUST00000033898 Gm2696A0A1W2P709 240 aa8.15□□□□□ -1.11
Col4a1-201ENSMUST00000033898 Celsr1O35161 3034 aa8.14□□□□□ -1.11
Col4a1-201ENSMUST00000033898 Stab1Q8R4Y4 2571 aa8.12□□□□□ -1.11
Col4a1-201ENSMUST00000033898 KalrnA2CG49 2964 aa8.12□□□□□ -1.11
Col4a1-201ENSMUST00000033898 Wdfy4E9Q2M9 3149 aa8.11□□□□□ -1.11
Col4a1-201ENSMUST00000033898 Tnp2P11378 117 aa8.09□□□□□ -1.11
Col4a1-201ENSMUST00000033898 Hectd1Q69ZR2 2618 aaKnown RBP8.09□□□□□ -1.11
Col4a1-201ENSMUST00000033898 Fbn2Q61555 2907 aa8.09□□□□□ -1.11
Col4a1-201ENSMUST00000033898 Csmd1Q923L3 3564 aa8.08□□□□□ -1.12
Col4a1-201ENSMUST00000033898 2310057N15RikQ9D6T8 200 aa8.08□□□□□ -1.12
Col4a1-201ENSMUST00000033898 Gm2310J3QNJ2 377 aa8.07□□□□□ -1.12
Col4a1-201ENSMUST00000033898 Gm21887J3QQ04 176 aa8.07□□□□□ -1.12
Col4a1-201ENSMUST00000033898 Kmt2bO08550 2713 aa8.05□□□□□ -1.12
Col4a1-201ENSMUST00000033898 RelnQ60841 3461 aa8.05□□□□□ -1.12
Col4a1-201ENSMUST00000033898 Ndufaf8A2AMZ4 74 aa8.04□□□□□ -1.12
Col4a1-201ENSMUST00000033898 Map1aQ9QYR6 2776 aa8.02□□□□□ -1.12
Col4a1-201ENSMUST00000033898 Cox6b2Q80ZN9 88 aa8.02□□□□□ -1.13
Col4a1-201ENSMUST00000033898 2310061N02RikQ9D6S9 174 aa8.02□□□□□ -1.13
Col4a1-201ENSMUST00000033898 Adgrg4B7ZCC9 3073 aa8□□□□□ -1.13
Col4a1-201ENSMUST00000033898 FryE9Q8I9 3020 aa7.99□□□□□ -1.13
Col4a1-201ENSMUST00000033898 Gm884A2A9H6 3643 aa7.98□□□□□ -1.13
Col4a1-201ENSMUST00000033898 SpenQ62504 3644 aaKnown RBP7.97□□□□□ -1.13
Col4a1-201ENSMUST00000033898 Smg1Q8BKX6 3658 aaKnown RBP7.95□□□□□ -1.14
Col4a1-201ENSMUST00000033898 Itpr3P70227 2670 aa7.94□□□□□ -1.14
Col4a1-201ENSMUST00000033898 Gm5965D3Z724 196 aa7.94□□□□□ -1.14
Col4a1-201ENSMUST00000033898 NipblQ6KCD5 2798 aaKnown RBP7.94□□□□□ -1.14
Col4a1-201ENSMUST00000033898 Zfhx4Q9JJN2 3550 aa7.92□□□□□ -1.14
Col4a1-201ENSMUST00000033898 Myo15bI7HPW8 3033 aa7.92□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms