RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Gm10642Q3TWM1 71 aa3,02□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Mki67E9PVX6 3177 aaKnown RBP3,01□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Gm3285A0A1W2P7U0 201 aa3,01□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Sprr4Q8CGN8 76 aa3,01□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Chtf8P0CG14 533 aa3,01□□□□□ -1,93
Prkdc-201ENSMUST00000023352 4933415A04RikQ9D443 101 aa3,01□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Gm9821Q8K076 103 aa3□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Zcchc13Q9D548 170 aa3□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Fam229bQ8CF36 80 aa2,99□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Gm3646F6S692 53 aa2,99□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Hivep1Q03172 2688 aa2,99□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Gm21798J3QNU5 87 aa2,99□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Camk2n1Q6QWF9 78 aa2,98□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Ubr5Q80TP3 2792 aa2,98□□□□□ -1,93
Prkdc-201ENSMUST00000023352 A330070K13RikQ8CA53 115 aa2,97□□□□□ -1,93
Prkdc-201ENSMUST00000023352 ApcQ61315 2845 aa2,97□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Col6a3E9PWQ3 3284 aa2,96□□□□□ -1,93
Prkdc-201ENSMUST00000023352 Muc2Q80Z19 2680 aa2,96□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Cystm1Q8K353 104 aa2,96□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Itpr2Q9Z329 2701 aa2,95□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Defb37Q7TMD2 62 aa2,95□□□□□ -1,94
Prkdc-201ENSMUST00000023352 FlncQ8VHX6 2726 aaKnown RBP2,95□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Krtap11-1E9Q2E9 183 aa2,95□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Brca2P97929 3329 aa2,95□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Col12a1Q60847 3120 aa2,94□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Fam104aA2A6P4 185 aa2,94□□□□□ -1,94
Prkdc-201ENSMUST00000023352 VcanQ62059 3357 aa2,94□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Odf3bQ5M8M2 238 aa2,94□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Dmxl1Q6PNC0 3013 aa2,94□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Gm37013Q8K491 104 aa2,93□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Wdfy3Q6VNB8 3508 aa2,93□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Gm10065F6TJM2 114 aa2,93□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Celsr3Q91ZI0 3301 aa2,93□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Gm7173A0A0G2JEB6 3132 aa2,93□□□□□ -1,94
Prkdc-201ENSMUST00000023352 SpegQ62407 3262 aa2,92□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Sec61bQ9CQS8 96 aaKnown RBP2,92□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Myo15aQ9QZZ4 3511 aa2,92□□□□□ -1,94
Prkdc-201ENSMUST00000023352 A730071L15RikQ8C4X0 137 aa2,92□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Fam229aB2KGE5 128 aa2,92□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Vps13aQ5H8C4 3166 aa2,91□□□□□ -1,94
Prkdc-201ENSMUST00000023352 KalrnA2CG49 2964 aa2,91□□□□□ -1,94
Prkdc-201ENSMUST00000023352 2310034C09RikQ9D746 214 aa2,91□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Frem2Q6NVD0 3160 aa2,91□□□□□ -1,94
Prkdc-201ENSMUST00000023352 TgO08710 2766 aa2,91□□□□□ -1,94
Prkdc-201ENSMUST00000023352 Prune2Q52KR3 3084 aa2,9□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Rev3lQ61493 3122 aa2,89□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Plac8Q9JI48 112 aa2,89□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Gm10320E9PW43 113 aa2,89□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Spink7Q6IE32 76 aa2,89□□□□□ -1,95
Prkdc-201ENSMUST00000023352 NbdyA0A0N4SUI7 68 aa2,88□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Sprr1aQ62266 144 aa2,88□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Fbn2Q61555 2907 aa2,87□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Srrm2Q8BTI8 2703 aaKnown RBP2,87□□□□□ -1,95
Prkdc-201ENSMUST00000023352 FcgbpE9Q0B5 2583 aa2,86□□□□□ -1,95
Prkdc-201ENSMUST00000023352 DspE9Q557 2883 aaKnown RBP2,86□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Cox6b2Q80ZN9 88 aa2,86□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Zzef1Q5SSH7 2924 aa2,85□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Wdfy4E9Q2M9 3149 aa2,85□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Defb1P56386 69 aa2,85□□□□□ -1,95
Prkdc-201ENSMUST00000023352 AspmQ8CJ27 3122 aa2,85□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Igfn1Q3KNY0 2849 aa2,84□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Dchs1E9PVD3 3291 aa2,84□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Defb9Q8R2I6 67 aa2,84□□□□□ -1,95
Prkdc-201ENSMUST00000023352 Cfap54Q8C6S9 3106 aa2,84□□□□□ -1,95
Prkdc-201ENSMUST00000023352 AtmQ62388 3066 aa2,83□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Rpl37Q9D823 97 aa2,83□□□□□ -1,96
Prkdc-201ENSMUST00000023352 BptfA2A654 3036 aaKnown RBP2,83□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Gm10139O88245 57 aa2,83□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Gm3250E9Q1M3 230 aa2,83□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Fam168bQ80XQ8 194 aa2,83□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Rps29P62274 56 aa2,82□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Lrrc37aB1AWG4 3215 aa2,82□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Gm16253D3Z167 63 aa2,82□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Dchs2A0A0A6YW72 3346 aa2,81□□□□□ -1,96
Prkdc-201ENSMUST00000023352 BC029722A0A0N4SW31 51 aa2,81□□□□□ -1,96
Prkdc-201ENSMUST00000023352 MgaA2AWL7 3003 aaKnown RBP2,81□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Gm4491E0CX42 125 aa2,81□□□□□ -1,96
Prkdc-201ENSMUST00000023352 6030445D17RikE9Q8F9 148 aa2,81□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Romo1P60603 79 aa2,8□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Anapc11Q9CPX9 84 aa2,8□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Gm2310J3QNJ2 377 aa2,8□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Ranbp2Q9ERU9 3053 aaKnown RBP2,8□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Bod1lE9Q6J5 3032 aa2,8□□□□□ -1,96
Prkdc-201ENSMUST00000023352 FrylF8VQ05 3007 aa2,8□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Ash1lQ99MY8 2958 aa2,79□□□□□ -1,96
Prkdc-201ENSMUST00000023352 NbeaQ9EPN1 2936 aa2,79□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Ndufaf8A2AMZ4 74 aa2,79□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Trank1Q8BV79 2999 aa2,78□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Pdzd2E9Q1M1 2796 aa2,78□□□□□ -1,96
Prkdc-201ENSMUST00000023352 Gm40193A0A1B0GT39 78 aa2,77□□□□□ -1,97
Prkdc-201ENSMUST00000023352 Gm19426M0QWC7 77 aa2,77□□□□□ -1,97
Prkdc-201ENSMUST00000023352 Lama1P19137 3084 aa2,76□□□□□ -1,97
Prkdc-201ENSMUST00000023352 Gm3880A0A1B0GSB3 72 aa2,76□□□□□ -1,97
Prkdc-201ENSMUST00000023352 Krtap29-1A2A5X4 342 aa2,76□□□□□ -1,97
Prkdc-201ENSMUST00000023352 FryE9Q8I9 3020 aa2,75□□□□□ -1,97
Prkdc-201ENSMUST00000023352 Gm5767A0A0J9YTU8 78 aa2,74□□□□□ -1,97
Prkdc-201ENSMUST00000023352 Nf1Q04690 2841 aa2,74□□□□□ -1,97
Prkdc-201ENSMUST00000023352 Zfhx4Q9JJN2 3550 aa2,74□□□□□ -1,97
Prkdc-201ENSMUST00000023352 Tenm3Q9WTS6 2715 aa2,74□□□□□ -1,97
Prkdc-201ENSMUST00000023352 Gm3233E9Q2H5 230 aa2,73□□□□□ -1,97
Retrieved 100 of 22,080 RNA–protein pairs in 45,8 ms