RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Sprr2jO70561 109 aa7.24□□□□□ -1.25
Msh3-201ENSMUST00000022220 Gm10770F7D043 238 aa7.23□□□□□ -1.25
Msh3-201ENSMUST00000022220 Sox16Q62247 57 aa7.23□□□□□ -1.25
Msh3-201ENSMUST00000022220 AplnQ9R0R4 77 aa7.23□□□□□ -1.25
Msh3-201ENSMUST00000022220 Igkv8-28A0A0G2JE47 121 aa7.23□□□□□ -1.25
Msh3-201ENSMUST00000022220 Tcl1b5P56845 121 aa7.22□□□□□ -1.25
Msh3-201ENSMUST00000022220 A330070K13RikQ8CA53 115 aa7.21□□□□□ -1.26
Msh3-201ENSMUST00000022220 Gm9508A0A1W2P7W0 230 aa7.2□□□□□ -1.26
Msh3-201ENSMUST00000022220 Adm2Q7TNK8 150 aa7.19□□□□□ -1.26
Msh3-201ENSMUST00000022220 Cdc42se1Q8BHL7 80 aa7.19□□□□□ -1.26
Msh3-201ENSMUST00000022220 AI606181Q8C7B9 129 aa7.19□□□□□ -1.26
Msh3-201ENSMUST00000022220 Fam168bQ80XQ8 194 aa7.19□□□□□ -1.26
Msh3-201ENSMUST00000022220 C130032M10RikQ8C888 123 aa7.18□□□□□ -1.26
Msh3-201ENSMUST00000022220 Defb11Q8R2I7 77 aa7.18□□□□□ -1.26
Msh3-201ENSMUST00000022220 Q8BT88 171 aa7.18□□□□□ -1.26
Msh3-201ENSMUST00000022220 SptssbQ925E8 76 aa7.17□□□□□ -1.26
Msh3-201ENSMUST00000022220 Gm10837Q3UTT8 145 aa7.17□□□□□ -1.26
Msh3-201ENSMUST00000022220 Elof1P60003 83 aa7.16□□□□□ -1.26
Msh3-201ENSMUST00000022220 Sprr1bQ62267 153 aa7.16□□□□□ -1.26
Msh3-201ENSMUST00000022220 Igkv3-12A0A140T8P0 119 aa7.16□□□□□ -1.26
Msh3-201ENSMUST00000022220 Mrpl34Q99N91 92 aa7.16□□□□□ -1.26
Msh3-201ENSMUST00000022220 AY074887Q8R5F9 132 aa7.16□□□□□ -1.26
Msh3-201ENSMUST00000022220 Vpreb3D3Z6J4 130 aa7.15□□□□□ -1.26
Msh3-201ENSMUST00000022220 Phxr5P08399 672 aa7.15□□□□□ -1.26
Msh3-201ENSMUST00000022220 1700074P13RikQ9D9G7 251 aa7.15□□□□□ -1.26
Msh3-201ENSMUST00000022220 Cox6a2P43023 97 aa7.15□□□□□ -1.27
Msh3-201ENSMUST00000022220 Tenm1Q9WTS4 2731 aa7.14□□□□□ -1.27
Msh3-201ENSMUST00000022220 Igkv3-4A0A140T8Q4 119 aa7.14□□□□□ -1.27
Msh3-201ENSMUST00000022220 Gm44790A0A0N4SV91 103 aa7.14□□□□□ -1.27
Msh3-201ENSMUST00000022220 Col7a1Q63870 2944 aa7.14□□□□□ -1.27
Msh3-201ENSMUST00000022220 A0A286YE49 62 aa7.13□□□□□ -1.27
Msh3-201ENSMUST00000022220 Csmd2V9GX34 3611 aa7.13□□□□□ -1.27
Msh3-201ENSMUST00000022220 Sprr4Q8CGN8 76 aa7.13□□□□□ -1.27
Msh3-201ENSMUST00000022220 Coa5Q99M07 74 aa7.13□□□□□ -1.27
Msh3-201ENSMUST00000022220 A730071L15RikQ8C4X0 137 aa7.12□□□□□ -1.27
Msh3-201ENSMUST00000022220 Gm12353A2AGJ4 60 aa7.12□□□□□ -1.27
Msh3-201ENSMUST00000022220 Phf5aP83870 110 aaKnown RBP7.12□□□□□ -1.27
Msh3-201ENSMUST00000022220 Defb38Q7TNV7 63 aa7.12□□□□□ -1.27
Msh3-201ENSMUST00000022220 Plac8Q9JI48 112 aa7.12□□□□□ -1.27
Msh3-201ENSMUST00000022220 Igkv8-19A0A0G2JFN8 121 aa7.11□□□□□ -1.27
Msh3-201ENSMUST00000022220 Wfdc3Q14AE4 130 aa7.11□□□□□ -1.27
Msh3-201ENSMUST00000022220 Gm10642Q3TWM1 71 aa7.1□□□□□ -1.27
Msh3-201ENSMUST00000022220 A930002H24RikQ8C8Y3 163 aa7.1□□□□□ -1.27
Msh3-201ENSMUST00000022220 Fbn1Q61554 2873 aaKnown RBP7.1□□□□□ -1.27
Msh3-201ENSMUST00000022220 Gm10267M0QWD8 85 aa7.09□□□□□ -1.27
Msh3-201ENSMUST00000022220 Reg3aO09037 175 aa7.09□□□□□ -1.27
Msh3-201ENSMUST00000022220 TgO08710 2766 aa7.09□□□□□ -1.27
Msh3-201ENSMUST00000022220 Wfdc6bF6ULY1 148 aa7.09□□□□□ -1.27
Msh3-201ENSMUST00000022220 Igkv3-3A0A140T8Q0 119 aa7.08□□□□□ -1.28
Msh3-201ENSMUST00000022220 Gm11627A6PWP4 55 aa7.08□□□□□ -1.28
Msh3-201ENSMUST00000022220 1700018G05RikA0A1B0GSI2 66 aa7.08□□□□□ -1.28
Msh3-201ENSMUST00000022220 Psors1c2Q80ZC9 134 aa7.08□□□□□ -1.28
Msh3-201ENSMUST00000022220 Defb13Q8R2I4 64 aa7.08□□□□□ -1.28
Msh3-201ENSMUST00000022220 Smim29Q8R043 75 aa7.07□□□□□ -1.28
Msh3-201ENSMUST00000022220 Igkv3-7A0A0G2JE31 119 aa7.07□□□□□ -1.28
Msh3-201ENSMUST00000022220 Defb39Q70KL3 74 aa7.07□□□□□ -1.28
Msh3-201ENSMUST00000022220 Gm21886J3QJU9 214 aa7.05□□□□□ -1.28
Msh3-201ENSMUST00000022220 Dmac1Q9CQ00 111 aa7.05□□□□□ -1.28
Msh3-201ENSMUST00000022220 Ndufs5Q99LY9 106 aa7.04□□□□□ -1.28
Msh3-201ENSMUST00000022220 Gm17349F7BGH6 99 aa7.03□□□□□ -1.28
Msh3-201ENSMUST00000022220 Gm28230A0A0A0MQ91 144 aa7.03□□□□□ -1.28
Msh3-201ENSMUST00000022220 Ccdc179J3QM76 67 aa7.02□□□□□ -1.29
Msh3-201ENSMUST00000022220 Phxr4P15974 95 aa7.01□□□□□ -1.29
Msh3-201ENSMUST00000022220 VwfQ8CIZ8 2813 aa7.01□□□□□ -1.29
Msh3-201ENSMUST00000022220 Q8K1L6 76 aa7□□□□□ -1.29
Msh3-201ENSMUST00000022220 Rpl37aP61514 92 aa6.99□□□□□ -1.29
Msh3-201ENSMUST00000022220 Gm7276Q3TYW4 209 aa6.96□□□□□ -1.3
Msh3-201ENSMUST00000022220 Ndufb1P0DN34 57 aa6.95□□□□□ -1.3
Msh3-201ENSMUST00000022220 Anapc11Q9CPX9 84 aa6.95□□□□□ -1.3
Msh3-201ENSMUST00000022220 Prol1E9PYQ4 312 aa6.95□□□□□ -1.3
Msh3-201ENSMUST00000022220 P84750 121 aa6.95□□□□□ -1.3
Msh3-201ENSMUST00000022220 Gm9507D3Z5T3 223 aa6.94□□□□□ -1.3
Msh3-201ENSMUST00000022220 CubnQ9JLB4 3623 aa6.94□□□□□ -1.3
Msh3-201ENSMUST00000022220 Defb9Q8R2I6 67 aa6.94□□□□□ -1.3
Msh3-201ENSMUST00000022220 Gm10160F6Y577 67 aa6.93□□□□□ -1.3
Msh3-201ENSMUST00000022220 RetnlbQ99P86 105 aa6.93□□□□□ -1.3
Msh3-201ENSMUST00000022220 Znf706Q9D115 76 aaKnown RBP6.93□□□□□ -1.3
Msh3-201ENSMUST00000022220 Chtf8P0CG14 533 aa6.91□□□□□ -1.3
Msh3-201ENSMUST00000022220 Spaca4Q80ZQ0 127 aa6.9□□□□□ -1.3
Msh3-201ENSMUST00000022220 Gm20661K7N787 53 aa6.89□□□□□ -1.31
Msh3-201ENSMUST00000022220 4933415A04RikQ9D443 101 aa6.89□□□□□ -1.31
Msh3-201ENSMUST00000022220 Gm20604F8WIA3 75 aa6.86□□□□□ -1.31
Msh3-201ENSMUST00000022220 Gpr15lA0A0B4J1N3 78 aa6.86□□□□□ -1.31
Msh3-201ENSMUST00000022220 Krtap10-4Q08EG8 221 aa6.85□□□□□ -1.31
Msh3-201ENSMUST00000022220 Zcchc13Q9D548 170 aa6.85□□□□□ -1.31
Msh3-201ENSMUST00000022220 LystP97412 3788 aa6.84□□□□□ -1.31
Msh3-201ENSMUST00000022220 Gm10643Q3URG9 111 aa6.83□□□□□ -1.32
Msh3-201ENSMUST00000022220 Gm27235Q3UW50 83 aa6.83□□□□□ -1.32
Msh3-201ENSMUST00000022220 Chchd10Q7TNL9 138 aa6.82□□□□□ -1.32
Msh3-201ENSMUST00000022220 Muc6Q80T03 2850 aa6.82□□□□□ -1.32
Msh3-201ENSMUST00000022220 Tenm2Q9WTS5 2764 aa6.8□□□□□ -1.32
Msh3-201ENSMUST00000022220 Fam104aA2A6P4 185 aa6.79□□□□□ -1.32
Msh3-201ENSMUST00000022220 AW011738F6S7Q2 159 aa6.78□□□□□ -1.32
Msh3-201ENSMUST00000022220 1700042G07RikB1AUF7 90 aa6.78□□□□□ -1.32
Msh3-201ENSMUST00000022220 Gm3646F6S692 53 aa6.77□□□□□ -1.33
Msh3-201ENSMUST00000022220 Gm26620Q9CY65 116 aa6.77□□□□□ -1.33
Msh3-201ENSMUST00000022220 Sprr1aQ62266 144 aa6.74□□□□□ -1.33
Msh3-201ENSMUST00000022220 Limd2Q8BGB5 128 aa6.71□□□□□ -1.33
Msh3-201ENSMUST00000022220 Gm37013Q8K491 104 aa6.71□□□□□ -1.33
Msh3-201ENSMUST00000022220 OxtP35454 125 aa6.71□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms