RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 1810062G17RikG3X8Y2 129 aa5.05□□□□□ -1.6
Pcdh9-204ENSMUST00000193901 Sprr4Q8CGN8 76 aa5.05□□□□□ -1.6
Pcdh9-204ENSMUST00000193901 Ttc28Q80XJ3 2450 aa5.02□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 PolqQ8CGS6 2544 aa5.02□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 Fam168bQ80XQ8 194 aa5.02□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 Chd8Q09XV5 2582 aaKnown RBP5.01□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 Fam229aB2KGE5 128 aa5.01□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 Cypt14J3QPF7 87 aa5.01□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 Gm10772F7AIG4 85 aa5.01□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 Tet2Q4JK59 1912 aaKnown RBP4.99□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 Romo1P60603 79 aa4.99□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 Zfyve26Q5DU37 2529 aa4.98□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 Gm9573F7C950 1606 aa4.98□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 Sprr1bQ62267 153 aa4.97□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 OxtP35454 125 aa4.97□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 Ankhd1E9PUR0 2548 aaKnown RBP4.97□□□□□ -1.61
Pcdh9-204ENSMUST00000193901 Krtap26-1Q9D7N2 215 aa4.96□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Rpl37Q9D823 97 aa4.96□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Gm4491E0CX42 125 aa4.96□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Fam104aA2A6P4 185 aa4.96□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Ndufaf8A2AMZ4 74 aa4.96□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Defb9Q8R2I6 67 aa4.95□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Hcfc1Q61191 2045 aaKnown RBP4.95□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Adamts20P59511 1906 aa4.95□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Odf3bQ5M8M2 238 aa4.94□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Wdr90Q6ZPG2 1874 aa4.94□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Zfp462B1AWL2 2495 aaKnown RBP4.94□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 CnbpP53996 178 aaKnown RBP4.94□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 6030445D17RikE9Q8F9 148 aa4.93□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Dennd4cA6H8H2 1906 aa4.93□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Tln1P26039 2541 aaKnown RBP4.93□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Lrrk2Q5S006 2527 aa4.93□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Zcchc13Q9D548 170 aa4.92□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Sptbn4E9PX29 2561 aa4.92□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Krtap11-1E9Q2E9 183 aa4.91□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Krtap24-1G3X9A2 248 aa4.91□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 C530025M09RikF6RGA8 229 aa4.91□□□□□ -1.62
Pcdh9-204ENSMUST00000193901 Sec61bQ9CQS8 96 aaKnown RBP4.9□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 Gm3646F6S692 53 aa4.89□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 Gm37013Q8K491 104 aa4.89□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 Ptpn13Q64512 2453 aa4.88□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 Lrp4Q8VI56 1905 aa4.88□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 SetxA2AKX3 2646 aa4.88□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 Anapc11Q9CPX9 84 aa4.88□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 Smim29Q8R043 75 aa4.87□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 PtprsB0V2N1 1907 aa4.87□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 Gm10382Q3V0T5 144 aa4.86□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 Gm3285A0A1W2P7U0 201 aa4.86□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 Plac8Q9JI48 112 aa4.86□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 Tns1E9Q0S6 1888 aaKnown RBP4.85□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 NbdyA0A0N4SUI7 68 aa4.85□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 BC029722A0A0N4SW31 51 aa4.85□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 Gm10320E9PW43 113 aa4.84□□□□□ -1.63
Pcdh9-204ENSMUST00000193901 Flg2Q2VIS4 2362 aa4.84□□□□□ -1.64
Pcdh9-204ENSMUST00000193901 Piezo2Q8CD54 2822 aa4.83□□□□□ -1.64
Pcdh9-204ENSMUST00000193901 Col27a1Q5QNQ9 1845 aa4.83□□□□□ -1.64
Pcdh9-204ENSMUST00000193901 Cox6b2Q80ZN9 88 aa4.83□□□□□ -1.64
Pcdh9-204ENSMUST00000193901 Col4a2P08122 1707 aa4.83□□□□□ -1.64
Pcdh9-204ENSMUST00000193901 Gm19426M0QWC7 77 aa4.82□□□□□ -1.64
Pcdh9-204ENSMUST00000193901 Fam229bQ8CF36 80 aa4.82□□□□□ -1.64
Pcdh9-204ENSMUST00000193901 Gm10065F6TJM2 114 aa4.81□□□□□ -1.64
Pcdh9-204ENSMUST00000193901 Pkd1l2Q7TN88 2461 aa4.8□□□□□ -1.64
Pcdh9-204ENSMUST00000193901 1700042G07RikB1AUF7 90 aa4.79□□□□□ -1.64
Pcdh9-204ENSMUST00000193901 Golgb1E9PVZ8 3238 aa4.78□□□□□ -1.64
Pcdh9-204ENSMUST00000193901 Krtap15-1Q9QZU5 150 aa4.77□□□□□ -1.65
Pcdh9-204ENSMUST00000193901 Col5a1O88207 1838 aa4.77□□□□□ -1.65
Pcdh9-204ENSMUST00000193901 TrrapQ80YV3 2565 aaKnown RBP4.77□□□□□ -1.65
Pcdh9-204ENSMUST00000193901 PtprbB2RU80 1998 aa4.76□□□□□ -1.65
Pcdh9-204ENSMUST00000193901 SrcapA0A087WQ44 3271 aa4.76□□□□□ -1.65
Pcdh9-204ENSMUST00000193901 Gm9112A2AI92 75 aa4.73□□□□□ -1.65
Pcdh9-204ENSMUST00000193901 2310050C09RikG5E8Z3 280 aa4.72□□□□□ -1.65
Pcdh9-204ENSMUST00000193901 Epg5Q80TA9 2572 aa4.7□□□□□ -1.66
Pcdh9-204ENSMUST00000193901 Gm16253D3Z167 63 aa4.68□□□□□ -1.66
Pcdh9-204ENSMUST00000193901 Usp9xP70398 2559 aaKnown RBP4.68□□□□□ -1.66
Pcdh9-204ENSMUST00000193901 Gm10139O88245 57 aa4.67□□□□□ -1.66
Pcdh9-204ENSMUST00000193901 Kiaa1549Q68FD9 1940 aa4.67□□□□□ -1.66
Pcdh9-204ENSMUST00000193901 Gm5767A0A0J9YTU8 78 aa4.66□□□□□ -1.66
Pcdh9-204ENSMUST00000193901 Gm40193A0A1B0GT39 78 aa4.66□□□□□ -1.66
Pcdh9-204ENSMUST00000193901 4933415A04RikQ9D443 101 aa4.66□□□□□ -1.66
Pcdh9-204ENSMUST00000193901 PcntP48725 2898 aa4.64□□□□□ -1.67
Pcdh9-204ENSMUST00000193901 Myo15bI7HPW8 3033 aa4.63□□□□□ -1.67
Pcdh9-204ENSMUST00000193901 Tnp1P10856 55 aa4.63□□□□□ -1.67
Pcdh9-204ENSMUST00000193901 Gm42715A0A087WP63 3095 aaKnown RBP4.63□□□□□ -1.67
Pcdh9-204ENSMUST00000193901 Abca12E9Q876 2595 aa4.62□□□□□ -1.67
Pcdh9-204ENSMUST00000193901 Lama2Q60675 3118 aaKnown RBP4.61□□□□□ -1.67
Pcdh9-204ENSMUST00000193901 UtrnE9Q6R7 3430 aa4.61□□□□□ -1.67
Pcdh9-204ENSMUST00000193901 Bahcc1Q3UHR0 2643 aa4.6□□□□□ -1.67
Pcdh9-204ENSMUST00000193901 Usp9yF8VPU6 2556 aa4.59□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 Zfp292Q9Z2U2 2698 aa4.59□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 Unc79Q0KK59 2596 aa4.59□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 MtorQ9JLN9 2549 aa4.59□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 Ankrd11E9Q4F7 2643 aa4.59□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 Cep192E9Q4Y4 2514 aaKnown RBP4.57□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 Tnrc18Q80WC3 2878 aa4.56□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 Gm21887J3QQ04 176 aa4.56□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 Setd2E9Q5F9 2537 aa4.56□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 FlnbQ80X90 2602 aaKnown RBP4.55□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 Sprr1aQ62266 144 aa4.54□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 Ep400Q8CHI8 3072 aaKnown RBP4.54□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 Gm11565A2A4M7 156 aa4.54□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms