RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 CrygaP04345 174 aa8.63□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Snhg11Q4G0K9 87 aa8.63□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Limd2Q8BGB5 128 aa8.62□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Gm17689B3GLJ4 109 aa8.62□□□□□ -1.03
Col6a3-208ENSMUST00000188587 PcntP48725 2898 aa8.62□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Elof1P60003 83 aa8.61□□□□□ -1.03
Col6a3-208ENSMUST00000188587 HrnrQ8VHD8 2496 aa8.61□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Spink13Q3UTS8 97 aa8.61□□□□□ -1.03
Col6a3-208ENSMUST00000188587 1810062G17RikG3X8Y2 129 aa8.6□□□□□ -1.03
Col6a3-208ENSMUST00000188587 3110070M22RikQ9DAQ7 118 aa8.6□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Lama3Q61789 3330 aa8.6□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Smr3aQ61900 147 aa8.6□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Rpl37aP61514 92 aa8.59□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Gm44790A0A0N4SV91 103 aa8.59□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Ankrd11E9Q4F7 2643 aa8.59□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Sostdc1Q9CQN4 206 aa8.58□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Ighv2-2A0A075B5P8 116 aa8.57□□□□□ -1.04
Col6a3-208ENSMUST00000188587 P01821 116 aa8.57□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Krtap24-1G3X9A2 248 aa8.57□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Gm27235Q3UW50 83 aa8.57□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Akap13E9Q394 2776 aa8.57□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Gm26661M0QWV4 156 aa8.57□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Gm3285A0A1W2P7U0 201 aa8.56□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Gm10197F6QEY5 67 aa8.56□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Gm10837Q3UTT8 145 aa8.54□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Crip3Q6Q6R3 243 aa8.53□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Gm10770F7D043 238 aa8.52□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Gm5617Q91VN2 117 aa8.52□□□□□ -1.05
Col6a3-208ENSMUST00000188587 MobpQ9D2P8 170 aa8.52□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Pla2g10Q9QXX3 151 aa8.52□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Zfp292Q9Z2U2 2698 aa8.51□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Nsd1O88491 2588 aaKnown RBP8.51□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Fam168bQ80XQ8 194 aa8.49□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Cdip1Q9DB75 208 aa8.49□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Gm9195A0A140LHT4 2805 aa8.48□□□□□ -1.05
Col6a3-208ENSMUST00000188587 A530084C06RikQ3UTW2 186 aa8.46□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Stab1Q8R4Y4 2571 aa8.45□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Q8BT88 171 aa8.45□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Psors1c2Q80ZC9 134 aa8.45□□□□□ -1.06
Col6a3-208ENSMUST00000188587 7530416G11RikJ3QJX6 159 aa8.45□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Fn1P11276 2477 aaKnown RBP8.44□□□□□ -1.06
Col6a3-208ENSMUST00000188587 AtrQ9JKK8 2635 aa8.43□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Rnase13Q5GAM7 153 aa8.43□□□□□ -1.06
Col6a3-208ENSMUST00000188587 FlnaQ8BTM8 2647 aaKnown RBP8.43□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Krtap16-1A2A5X5 502 aa8.42□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Bod1lE9Q6J5 3032 aa8.42□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Phxr5P08399 672 aa8.4□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Map1aQ9QYR6 2776 aa8.4□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Ranbp2Q9ERU9 3053 aaKnown RBP8.39□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Rps28P62858 69 aaKnown RBP8.39□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Gm10772F7AIG4 85 aa8.38□□□□□ -1.07
Col6a3-208ENSMUST00000188587 AW011738F6S7Q2 159 aa8.38□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Cdc42se1Q8BHL7 80 aa8.38□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Gm10308Q9CVR5 141 aa8.38□□□□□ -1.07
Col6a3-208ENSMUST00000188587 CenpfE9Q3P4 2997 aaKnown RBP8.38□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Lama2Q60675 3118 aaKnown RBP8.37□□□□□ -1.07
Col6a3-208ENSMUST00000188587 OxtP35454 125 aa8.36□□□□□ -1.07
Col6a3-208ENSMUST00000188587 AI854703Q8BIN3 203 aa8.36□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Gm3250E9Q1M3 230 aa8.35□□□□□ -1.07
Col6a3-208ENSMUST00000188587 TrioQ0KL02 3102 aa8.34□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Krtap11-1E9Q2E9 183 aa8.34□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Coa5Q99M07 74 aa8.34□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Sprr4Q8CGN8 76 aa8.33□□□□□ -1.08
Col6a3-208ENSMUST00000188587 Gcn1E9PVA8 2671 aaKnown RBP8.32□□□□□ -1.08
Col6a3-208ENSMUST00000188587 Uqcr11Q9CPX8 56 aa8.32□□□□□ -1.08
Col6a3-208ENSMUST00000188587 Krtap26-1Q9D7N2 215 aa8.29□□□□□ -1.08
Col6a3-208ENSMUST00000188587 Gm9821Q8K076 103 aa8.28□□□□□ -1.08
Col6a3-208ENSMUST00000188587 FlnbQ80X90 2602 aaKnown RBP8.28□□□□□ -1.08
Col6a3-208ENSMUST00000188587 Cypt15B1AXS0 87 aa8.27□□□□□ -1.09
Col6a3-208ENSMUST00000188587 Defb9Q8R2I6 67 aa8.27□□□□□ -1.09
Col6a3-208ENSMUST00000188587 CriptO70333 101 aa8.26□□□□□ -1.09
Col6a3-208ENSMUST00000188587 Ash1lQ99MY8 2958 aa8.25□□□□□ -1.09
Col6a3-208ENSMUST00000188587 Notch1Q01705 2531 aa8.24□□□□□ -1.09
Col6a3-208ENSMUST00000188587 Gm26620Q9CY65 116 aa8.22□□□□□ -1.09
Col6a3-208ENSMUST00000188587 Mki67E9PVX6 3177 aaKnown RBP8.21□□□□□ -1.09
Col6a3-208ENSMUST00000188587 NipblQ6KCD5 2798 aaKnown RBP8.21□□□□□ -1.09
Col6a3-208ENSMUST00000188587 AY074887Q8R5F9 132 aa8.21□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Usp34Q6ZQ93 3582 aa8.21□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Gm7276Q3TYW4 209 aa8.21□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Spink7Q6IE32 76 aa8.2□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Sprr1bQ62267 153 aa8.19□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Anapc11Q9CPX9 84 aa8.19□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Gm7173A0A0G2JEB6 3132 aa8.19□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Phxr4P15974 95 aa8.18□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Gm11213A0A1B0GR83 88 aa8.16□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Plac8Q9JI48 112 aa8.13□□□□□ -1.11
Col6a3-208ENSMUST00000188587 A330070K13RikQ8CA53 115 aa8.12□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Hectd1Q69ZR2 2618 aaKnown RBP8.12□□□□□ -1.11
Col6a3-208ENSMUST00000188587 2310034C09RikQ9D746 214 aa8.11□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Rev3lQ61493 3122 aa8.11□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Cfap54Q8C6S9 3106 aa8.11□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Cdh23Q99PF4 3354 aa8.11□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Gm21798J3QNU5 87 aa8.11□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Col12a1Q60847 3120 aa8.11□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Gm10643Q3URG9 111 aa8.1□□□□□ -1.11
Col6a3-208ENSMUST00000188587 CnbpP53996 178 aaKnown RBP8.09□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Lypd5Q9D7Z7 256 aa8.08□□□□□ -1.12
Col6a3-208ENSMUST00000188587 C530025M09RikF6RGA8 229 aa8.07□□□□□ -1.12
Col6a3-208ENSMUST00000188587 Dmxl1Q6PNC0 3013 aa8.06□□□□□ -1.12
Col6a3-208ENSMUST00000188587 Celsr3Q91ZI0 3301 aa8.06□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms