RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Igkv8-21A0A140T8P7 120 aa4.2□□□□□ -1.74
Lig4-202ENSMUST00000170033 AW011738F6S7Q2 159 aa4.2□□□□□ -1.74
Lig4-202ENSMUST00000170033 SonQ9QX47 2444 aaKnown RBP4.2□□□□□ -1.74
Lig4-202ENSMUST00000170033 Cep192E9Q4Y4 2514 aaKnown RBP4.2□□□□□ -1.74
Lig4-202ENSMUST00000170033 Hectd1Q69ZR2 2618 aaKnown RBP4.2□□□□□ -1.74
Lig4-202ENSMUST00000170033 Igkv8-26A0A075B5N5 123 aa4.19□□□□□ -1.74
Lig4-202ENSMUST00000170033 Gm17689B3GLJ4 109 aa4.19□□□□□ -1.74
Lig4-202ENSMUST00000170033 Gm7276Q3TYW4 209 aa4.19□□□□□ -1.74
Lig4-202ENSMUST00000170033 OtoglF7A4A7 2325 aa4.19□□□□□ -1.74
Lig4-202ENSMUST00000170033 Rpl39lQ9CQD0 51 aa4.19□□□□□ -1.74
Lig4-202ENSMUST00000170033 A0A286YCN5 57 aa4.19□□□□□ -1.74
Lig4-202ENSMUST00000170033 Gm9513B3GLJ6 99 aa4.18□□□□□ -1.74
Lig4-202ENSMUST00000170033 Nupr2Q497P3 102 aa4.18□□□□□ -1.74
Lig4-202ENSMUST00000170033 Nav3Q80TN7 2359 aa4.18□□□□□ -1.74
Lig4-202ENSMUST00000170033 2310034G01RikA0A286YDL3 209 aa4.18□□□□□ -1.74
Lig4-202ENSMUST00000170033 AY074887Q8R5F9 132 aa4.18□□□□□ -1.74
Lig4-202ENSMUST00000170033 Cox7b2Q9D2H1 82 aa4.18□□□□□ -1.74
Lig4-202ENSMUST00000170033 Leap2Q91V13 76 aa4.17□□□□□ -1.74
Lig4-202ENSMUST00000170033 Q9DAA7 145 aa4.17□□□□□ -1.74
Lig4-202ENSMUST00000170033 Ubl5Q9EPV8 73 aa4.17□□□□□ -1.74
Lig4-202ENSMUST00000170033 Gcn1E9PVA8 2671 aaKnown RBP4.17□□□□□ -1.74
Lig4-202ENSMUST00000170033 Gm9805F6YK59 57 aa4.17□□□□□ -1.74
Lig4-202ENSMUST00000170033 AI606181Q8C7B9 129 aa4.17□□□□□ -1.74
Lig4-202ENSMUST00000170033 Gm7257D3YX25 99 aa4.17□□□□□ -1.74
Lig4-202ENSMUST00000170033 Gm10401E9Q3K6 71 aa4.17□□□□□ -1.74
Lig4-202ENSMUST00000170033 Cypt14J3QPF7 87 aa4.17□□□□□ -1.74
Lig4-202ENSMUST00000170033 Nbeal1E9PYP2 2688 aa4.17□□□□□ -1.74
Lig4-202ENSMUST00000170033 Defb12Q8K4N3 78 aa4.16□□□□□ -1.74
Lig4-202ENSMUST00000170033 Defb10Q8R2I8 73 aa4.16□□□□□ -1.74
Lig4-202ENSMUST00000170033 Elof1P60003 83 aa4.16□□□□□ -1.74
Lig4-202ENSMUST00000170033 Higd2aQ9CQJ1 106 aa4.16□□□□□ -1.74
Lig4-202ENSMUST00000170033 Ptpn13Q64512 2453 aa4.16□□□□□ -1.74
Lig4-202ENSMUST00000170033 Usp9xP70398 2559 aaKnown RBP4.16□□□□□ -1.74
Lig4-202ENSMUST00000170033 Csmd2V9GX34 3611 aa4.15□□□□□ -1.74
Lig4-202ENSMUST00000170033 Igkv3-1A0A075B5P1 119 aa4.15□□□□□ -1.74
Lig4-202ENSMUST00000170033 Igkv8-24A0A140T8P5 121 aa4.15□□□□□ -1.74
Lig4-202ENSMUST00000170033 Gm10518F6UQQ9 182 aa4.15□□□□□ -1.74
Lig4-202ENSMUST00000170033 Ankrd11E9Q4F7 2643 aa4.15□□□□□ -1.74
Lig4-202ENSMUST00000170033 Gm16181B0V2H2 73 aa4.15□□□□□ -1.75
Lig4-202ENSMUST00000170033 Ube2aQ9Z255 152 aa4.15□□□□□ -1.75
Lig4-202ENSMUST00000170033 Notch3Q61982 2318 aa4.15□□□□□ -1.75
Lig4-202ENSMUST00000170033 Reg3dQ9QUS9 175 aa4.15□□□□□ -1.75
Lig4-202ENSMUST00000170033 Tep1P97499 2629 aa4.14□□□□□ -1.75
Lig4-202ENSMUST00000170033 Gm3646F6S692 53 aa4.14□□□□□ -1.75
Lig4-202ENSMUST00000170033 Phf5aP83870 110 aaKnown RBP4.14□□□□□ -1.75
Lig4-202ENSMUST00000170033 Q8BT88 171 aa4.14□□□□□ -1.75
Lig4-202ENSMUST00000170033 Chd6A3KFM7 2711 aa4.14□□□□□ -1.75
Lig4-202ENSMUST00000170033 Igkv8-16A0A0G2JDG9 121 aa4.14□□□□□ -1.75
Lig4-202ENSMUST00000170033 Igkv8-34A0A0G2JDU0 121 aa4.14□□□□□ -1.75
Lig4-202ENSMUST00000170033 Ndufs5Q99LY9 106 aa4.14□□□□□ -1.75
Lig4-202ENSMUST00000170033 Cdk2ap2Q9CPY4 127 aa4.14□□□□□ -1.75
Lig4-202ENSMUST00000170033 FlncQ8VHX6 2726 aaKnown RBP4.14□□□□□ -1.75
Lig4-202ENSMUST00000170033 Celsr2Q9R0M0 2920 aa4.13□□□□□ -1.75
Lig4-202ENSMUST00000170033 Lamtor3O88653 124 aa4.13□□□□□ -1.75
Lig4-202ENSMUST00000170033 Igkv8-27A0A0G2JF28 120 aa4.13□□□□□ -1.75
Lig4-202ENSMUST00000170033 Igkv8-30A0A140T8M3 121 aa4.13□□□□□ -1.75
Lig4-202ENSMUST00000170033 Krtap11-1E9Q2E9 183 aa4.13□□□□□ -1.75
Lig4-202ENSMUST00000170033 Abca12E9Q876 2595 aa4.13□□□□□ -1.75
Lig4-202ENSMUST00000170033 Snhg11Q4G0K9 87 aa4.12□□□□□ -1.75
Lig4-202ENSMUST00000170033 UqcrqQ9CQ69 82 aa4.12□□□□□ -1.75
Lig4-202ENSMUST00000170033 Zfyve26Q5DU37 2529 aa4.12□□□□□ -1.75
Lig4-202ENSMUST00000170033 Unc79Q0KK59 2596 aa4.12□□□□□ -1.75
Lig4-202ENSMUST00000170033 Prp2P05143 317 aa4.12□□□□□ -1.75
Lig4-202ENSMUST00000170033 Sprr4Q8CGN8 76 aa4.12□□□□□ -1.75
Lig4-202ENSMUST00000170033 Gm11627A6PWP4 55 aa4.12□□□□□ -1.75
Lig4-202ENSMUST00000170033 A830005F24RikQ8BRT5 167 aa4.12□□□□□ -1.75
Lig4-202ENSMUST00000170033 FlnaQ8BTM8 2647 aaKnown RBP4.12□□□□□ -1.75
Lig4-202ENSMUST00000170033 Chd8Q09XV5 2582 aaKnown RBP4.12□□□□□ -1.75
Lig4-202ENSMUST00000170033 Wnk1P83741 2377 aa4.11□□□□□ -1.75
Lig4-202ENSMUST00000170033 Myo9aQ8C170 2542 aa4.11□□□□□ -1.75
Lig4-202ENSMUST00000170033 Sprr2jO70561 109 aa4.11□□□□□ -1.75
Lig4-202ENSMUST00000170033 Igkv2-109A0A075B5K6 120 aa4.1□□□□□ -1.75
Lig4-202ENSMUST00000170033 Pla2g10Q9QXX3 151 aa4.1□□□□□ -1.75
Lig4-202ENSMUST00000170033 Pdzd2E9Q1M1 2796 aa4.1□□□□□ -1.75
Lig4-202ENSMUST00000170033 C2cd3Q52KB6 2323 aa4.1□□□□□ -1.75
Lig4-202ENSMUST00000170033 Msrb1Q9JLC3 116 aa4.1□□□□□ -1.75
Lig4-202ENSMUST00000170033 Prol1E9PYQ4 312 aa4.1□□□□□ -1.75
Lig4-202ENSMUST00000170033 Hivep2Q3UHF7 2430 aa4.1□□□□□ -1.75
Lig4-202ENSMUST00000170033 P06320 134 aa4.09□□□□□ -1.75
Lig4-202ENSMUST00000170033 Camk2n2Q78WH7 79 aa4.09□□□□□ -1.75
Lig4-202ENSMUST00000170033 Limd2Q8BGB5 128 aa4.09□□□□□ -1.75
Lig4-202ENSMUST00000170033 Cdc42se1Q8BHL7 80 aa4.09□□□□□ -1.75
Lig4-202ENSMUST00000170033 Sfta2E9PXB6 77 aa4.09□□□□□ -1.75
Lig4-202ENSMUST00000170033 Wfdc12Q9JHY3 85 aa4.09□□□□□ -1.75
Lig4-202ENSMUST00000170033 Muc2Q80Z19 2680 aa4.09□□□□□ -1.76
Lig4-202ENSMUST00000170033 Mast4Q811L6 2618 aa4.08□□□□□ -1.76
Lig4-202ENSMUST00000170033 Gm10320E9PW43 113 aa4.08□□□□□ -1.76
Lig4-202ENSMUST00000170033 Dmac1Q9CQ00 111 aa4.08□□□□□ -1.76
Lig4-202ENSMUST00000170033 Igkv3-4A0A140T8Q4 119 aa4.08□□□□□ -1.76
Lig4-202ENSMUST00000170033 Gm37013Q8K491 104 aa4.08□□□□□ -1.76
Lig4-202ENSMUST00000170033 AplnQ9R0R4 77 aa4.08□□□□□ -1.76
Lig4-202ENSMUST00000170033 Sprr1aQ62266 144 aa4.07□□□□□ -1.76
Lig4-202ENSMUST00000170033 A730071L15RikQ8C4X0 137 aa4.07□□□□□ -1.76
Lig4-202ENSMUST00000170033 Tenm3Q9WTS6 2715 aa4.07□□□□□ -1.76
Lig4-202ENSMUST00000170033 Igkv4-58A0A0G2JGI6 119 aa4.07□□□□□ -1.76
Lig4-202ENSMUST00000170033 Csmd3Q80T79 3707 aa4.07□□□□□ -1.76
Lig4-202ENSMUST00000170033 BsnO88737 3942 aa4.07□□□□□ -1.76
Lig4-202ENSMUST00000170033 A730009L09RikA0A1B0GS82 72 aa4.06□□□□□ -1.76
Lig4-202ENSMUST00000170033 Gm10643Q3URG9 111 aa4.06□□□□□ -1.76
Lig4-202ENSMUST00000170033 Rnase13Q5GAM7 153 aa4.06□□□□□ -1.76
Retrieved 100 of 22,080 RNA–protein pairs in 62.2 ms