RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Gm11627A6PWP4 55 aa11,79□□□□□ -0,52
Ebf3-204ENSMUST00000169486 HttP42859 3119 aa11,77□□□□□ -0,52
Ebf3-204ENSMUST00000169486 E130208F15RikQ3UPV3 143 aa11,77□□□□□ -0,52
Ebf3-204ENSMUST00000169486 Mki67E9PVX6 3177 aaKnown RBP11,77□□□□□ -0,53
Ebf3-204ENSMUST00000169486 Igkv8-19A0A0G2JFN8 121 aa11,75□□□□□ -0,53
Ebf3-204ENSMUST00000169486 FasnP19096 2504 aaKnown RBP11,75□□□□□ -0,53
Ebf3-204ENSMUST00000169486 Gm16181B0V2H2 73 aa11,75□□□□□ -0,53
Ebf3-204ENSMUST00000169486 Gm3250E9Q1M3 230 aa11,74□□□□□ -0,53
Ebf3-204ENSMUST00000169486 Prune2Q52KR3 3084 aa11,74□□□□□ -0,53
Ebf3-204ENSMUST00000169486 Gm10642Q3TWM1 71 aa11,74□□□□□ -0,53
Ebf3-204ENSMUST00000169486 Gcn1E9PVA8 2671 aaKnown RBP11,72□□□□□ -0,53
Ebf3-204ENSMUST00000169486 Snhg11Q4G0K9 87 aa11,72□□□□□ -0,53
Ebf3-204ENSMUST00000169486 Prrc2cQ3TLH4 2846 aaKnown RBP11,72□□□□□ -0,53
Ebf3-204ENSMUST00000169486 FlnbQ80X90 2602 aaKnown RBP11,72□□□□□ -0,53
Ebf3-204ENSMUST00000169486 Gm5617Q91VN2 117 aa11,71□□□□□ -0,53
Ebf3-204ENSMUST00000169486 Krtap24-1G3X9A2 248 aa11,7□□□□□ -0,54
Ebf3-204ENSMUST00000169486 Usp24B1AY13 2617 aaKnown RBP11,7□□□□□ -0,54
Ebf3-204ENSMUST00000169486 Rpl37aP61514 92 aa11,69□□□□□ -0,54
Ebf3-204ENSMUST00000169486 Jbts17Q8CE72 3214 aa11,69□□□□□ -0,54
Ebf3-204ENSMUST00000169486 Defb50Q6TU36 73 aa11,68□□□□□ -0,54
Ebf3-204ENSMUST00000169486 Psors1c2Q80ZC9 134 aa11,68□□□□□ -0,54
Ebf3-204ENSMUST00000169486 1810062G17RikG3X8Y2 129 aa11,66□□□□□ -0,54
Ebf3-204ENSMUST00000169486 Cdc42se1Q8BHL7 80 aa11,66□□□□□ -0,54
Ebf3-204ENSMUST00000169486 Ankrd17Q99NH0 2603 aaKnown RBP11,64□□□□□ -0,55
Ebf3-204ENSMUST00000169486 Tnrc18Q80WC3 2878 aa11,64□□□□□ -0,55
Ebf3-204ENSMUST00000169486 Gm10999F6Q4M4 69 aa11,63□□□□□ -0,55
Ebf3-204ENSMUST00000169486 Q8BT88 171 aa11,63□□□□□ -0,55
Ebf3-204ENSMUST00000169486 Coa5Q99M07 74 aa11,63□□□□□ -0,55
Ebf3-204ENSMUST00000169486 Phf5aP83870 110 aaKnown RBP11,63□□□□□ -0,55
Ebf3-204ENSMUST00000169486 Limd2Q8BGB5 128 aa11,62□□□□□ -0,55
Ebf3-204ENSMUST00000169486 Gm7173A0A0G2JEB6 3132 aa11,62□□□□□ -0,55
Ebf3-204ENSMUST00000169486 Fn1P11276 2477 aaKnown RBP11,62□□□□□ -0,55
Ebf3-204ENSMUST00000169486 Gm20661K7N787 53 aa11,61□□□□□ -0,55
Ebf3-204ENSMUST00000169486 AI606181Q8C7B9 129 aa11,61□□□□□ -0,55
Ebf3-204ENSMUST00000169486 Krtap11-1E9Q2E9 183 aa11,61□□□□□ -0,55
Ebf3-204ENSMUST00000169486 AY074887Q8R5F9 132 aa11,6□□□□□ -0,55
Ebf3-204ENSMUST00000169486 Gm28374F6SG70 93 aa11,59□□□□□ -0,55
Ebf3-204ENSMUST00000169486 Prol1E9PYQ4 312 aa11,58□□□□□ -0,56
Ebf3-204ENSMUST00000169486 A930002H24RikQ8C8Y3 163 aa11,58□□□□□ -0,56
Ebf3-204ENSMUST00000169486 Fam168bQ80XQ8 194 aa11,58□□□□□ -0,56
Ebf3-204ENSMUST00000169486 Col12a1Q60847 3120 aa11,57□□□□□ -0,56
Ebf3-204ENSMUST00000169486 Notch1Q01705 2531 aa11,56□□□□□ -0,56
Ebf3-204ENSMUST00000169486 AtrQ9JKK8 2635 aa11,55□□□□□ -0,56
Ebf3-204ENSMUST00000169486 Sprr4Q8CGN8 76 aa11,54□□□□□ -0,56
Ebf3-204ENSMUST00000169486 A330070K13RikQ8CA53 115 aa11,54□□□□□ -0,56
Ebf3-204ENSMUST00000169486 Gm10837Q3UTT8 145 aa11,54□□□□□ -0,56
Ebf3-204ENSMUST00000169486 HrnrQ8VHD8 2496 aa11,54□□□□□ -0,56
Ebf3-204ENSMUST00000169486 Lypd5Q9D7Z7 256 aa11,54□□□□□ -0,56
Ebf3-204ENSMUST00000169486 Chd7A2AJK6 2986 aaKnown RBP11,52□□□□□ -0,56
Ebf3-204ENSMUST00000169486 Cdh23Q99PF4 3354 aa11,51□□□□□ -0,57
Ebf3-204ENSMUST00000169486 Znf414Q9DCK4 299 aa11,5□□□□□ -0,57
Ebf3-204ENSMUST00000169486 Sprr1bQ62267 153 aa11,49□□□□□ -0,57
Ebf3-204ENSMUST00000169486 C530025M09RikF6RGA8 229 aa11,49□□□□□ -0,57
Ebf3-204ENSMUST00000169486 Phxr4P15974 95 aa11,49□□□□□ -0,57
Ebf3-204ENSMUST00000169486 Spaca4Q80ZQ0 127 aa11,49□□□□□ -0,57
Ebf3-204ENSMUST00000169486 Defb1P56386 69 aa11,47□□□□□ -0,57
Ebf3-204ENSMUST00000169486 Gm17606F6ZL36 78 aa11,47□□□□□ -0,57
Ebf3-204ENSMUST00000169486 Gpr15lA0A0B4J1N3 78 aa11,47□□□□□ -0,57
Ebf3-204ENSMUST00000169486 Fam229bQ8CF36 80 aa11,46□□□□□ -0,57
Ebf3-204ENSMUST00000169486 Dmbt1Q60997 2085 aa11,46□□□□□ -0,57
Ebf3-204ENSMUST00000169486 Gm12216A0A1W2P827 62 aa11,45□□□□□ -0,58
Ebf3-204ENSMUST00000169486 Cfap54Q8C6S9 3106 aa11,45□□□□□ -0,58
Ebf3-204ENSMUST00000169486 FlnaQ8BTM8 2647 aaKnown RBP11,44□□□□□ -0,58
Ebf3-204ENSMUST00000169486 Gm27235Q3UW50 83 aa11,43□□□□□ -0,58
Ebf3-204ENSMUST00000169486 Nsd1O88491 2588 aaKnown RBP11,42□□□□□ -0,58
Ebf3-204ENSMUST00000169486 Kmt2bO08550 2713 aa11,42□□□□□ -0,58
Ebf3-204ENSMUST00000169486 Q8BGJ3 129 aa11,41□□□□□ -0,58
Ebf3-204ENSMUST00000169486 Akap13E9Q394 2776 aa11,4□□□□□ -0,58
Ebf3-204ENSMUST00000169486 AplnQ9R0R4 77 aa11,39□□□□□ -0,59
Ebf3-204ENSMUST00000169486 4930507D05RikQ8C9C9 103 aa11,38□□□□□ -0,59
Ebf3-204ENSMUST00000169486 Gm11213A0A1B0GR83 88 aa11,38□□□□□ -0,59
Ebf3-204ENSMUST00000169486 Map1aQ9QYR6 2776 aa11,38□□□□□ -0,59
Ebf3-204ENSMUST00000169486 Rev3lQ61493 3122 aa11,36□□□□□ -0,59
Ebf3-204ENSMUST00000169486 Gm7276Q3TYW4 209 aa11,36□□□□□ -0,59
Ebf3-204ENSMUST00000169486 Spata3Q9D9T6 193 aa11,33□□□□□ -0,6
Ebf3-204ENSMUST00000169486 CnbpP53996 178 aaKnown RBP11,33□□□□□ -0,6
Ebf3-204ENSMUST00000169486 Phxr5P08399 672 aa11,31□□□□□ -0,6
Ebf3-204ENSMUST00000169486 Szt2A2A9C3 3431 aa11,31□□□□□ -0,6
Ebf3-204ENSMUST00000169486 Hectd1Q69ZR2 2618 aaKnown RBP11,3□□□□□ -0,6
Ebf3-204ENSMUST00000169486 Chtf8P0CG14 533 aa11,29□□□□□ -0,6
Ebf3-204ENSMUST00000169486 Defb11Q8R2I7 77 aa11,27□□□□□ -0,6
Ebf3-204ENSMUST00000169486 Itpr1P11881 2749 aa11,26□□□□□ -0,61
Ebf3-204ENSMUST00000169486 Myo15bI7HPW8 3033 aa11,26□□□□□ -0,61
Ebf3-204ENSMUST00000169486 Gm3233E9Q2H5 230 aa11,25□□□□□ -0,61
Ebf3-204ENSMUST00000169486 NipblQ6KCD5 2798 aaKnown RBP11,25□□□□□ -0,61
Ebf3-204ENSMUST00000169486 Ash1lQ99MY8 2958 aa11,24□□□□□ -0,61
Ebf3-204ENSMUST00000169486 Uqcr11Q9CPX8 56 aa11,24□□□□□ -0,61
Ebf3-204ENSMUST00000169486 Bod1lE9Q6J5 3032 aa11,23□□□□□ -0,61
Ebf3-204ENSMUST00000169486 Unc80Q8BLN6 3261 aa11,23□□□□□ -0,61
Ebf3-204ENSMUST00000169486 Gm10643Q3URG9 111 aa11,22□□□□□ -0,61
Ebf3-204ENSMUST00000169486 Vps13aQ5H8C4 3166 aa11,21□□□□□ -0,62
Ebf3-204ENSMUST00000169486 Smim29Q8R043 75 aa11,18□□□□□ -0,62
Ebf3-204ENSMUST00000169486 Mast4Q811L6 2618 aa11,18□□□□□ -0,62
Ebf3-204ENSMUST00000169486 Cypt15B1AXS0 87 aa11,18□□□□□ -0,62
Ebf3-204ENSMUST00000169486 Stab1Q8R4Y4 2571 aa11,18□□□□□ -0,62
Ebf3-204ENSMUST00000169486 Anapc11Q9CPX9 84 aa11,18□□□□□ -0,62
Ebf3-204ENSMUST00000169486 Lelp1Q9DAE3 120 aa11,18□□□□□ -0,62
Ebf3-204ENSMUST00000169486 Defb9Q8R2I6 67 aa11,17□□□□□ -0,62
Ebf3-204ENSMUST00000169486 Gm10320E9PW43 113 aa11,17□□□□□ -0,62
Ebf3-204ENSMUST00000169486 Gm9195A0A140LHT4 2805 aa11,16□□□□□ -0,62
Retrieved 100 of 22,080 RNA–protein pairs in 47,1 ms