RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Rhox8Q6VSS7 320 aa30,56■■■□□ 2,48
Ebf3-204ENSMUST00000169486 Rpgrip1Q9EPQ2 1331 aa28,48■■■□□ 2,15
Ebf3-204ENSMUST00000169486 Ehmt2Q9Z148 1263 aaKnown RBP28,14■■■□□ 2,1
Ebf3-204ENSMUST00000169486 Las1lA2BE28 776 aaKnown RBP27,32■■□□□ 1,96
Ebf3-204ENSMUST00000169486 Ccdc136Q3TVA9 1136 aa27,22■■□□□ 1,95
Ebf3-204ENSMUST00000169486 Cngb1E1AZ71 1325 aa27,1■■□□□ 1,93
Ebf3-204ENSMUST00000169486 Wdr66E9Q743 1299 aa27,07■■□□□ 1,92
Ebf3-204ENSMUST00000169486 Zeb1Q64318 1117 aa27,01■■□□□ 1,91
Ebf3-204ENSMUST00000169486 NischQ80TM9 1593 aa26,97■■□□□ 1,91
Ebf3-204ENSMUST00000169486 Gab3Q8BSM5 595 aa26,75■■□□□ 1,87
Ebf3-204ENSMUST00000169486 Esf1Q3V1V3 845 aaKnown RBP26,6■■□□□ 1,85
Ebf3-204ENSMUST00000169486 Trim41Q5NCC3 630 aa26,58■■□□□ 1,85
Ebf3-204ENSMUST00000169486 Acin1Q9JIX8 1338 aaKnown RBP26,56■■□□□ 1,84
Ebf3-204ENSMUST00000169486 Pelp1Q9DBD5 1123 aaKnown RBP26,38■■□□□ 1,81
Ebf3-204ENSMUST00000169486 Ube2uB1AUC4 352 aa26,31■■□□□ 1,8
Ebf3-204ENSMUST00000169486 Myt1lP97500 1187 aa26,15■■□□□ 1,78
Ebf3-204ENSMUST00000169486 Npm2Q80W85 207 aa26,14■■□□□ 1,78
Ebf3-204ENSMUST00000169486 CenpbP27790 599 aa26,13■■□□□ 1,77
Ebf3-204ENSMUST00000169486 NefmP08553 848 aa26,03■■□□□ 1,76
Ebf3-204ENSMUST00000169486 Pcgf6Q99NA9 353 aa25,93■■□□□ 1,74
Ebf3-204ENSMUST00000169486 UbtfP25976 765 aaKnown RBP25,9■■□□□ 1,74
Ebf3-204ENSMUST00000169486 HrcG5E8J6 738 aa25,66■■□□□ 1,7
Ebf3-204ENSMUST00000169486 Amer1Q7TS75 1132 aa25,61■■□□□ 1,69
Ebf3-204ENSMUST00000169486 Cdk11bP24788 784 aaKnown RBP25,58■■□□□ 1,69
Ebf3-204ENSMUST00000169486 Slc24a1Q91WD8 1130 aa25,57■■□□□ 1,68
Ebf3-204ENSMUST00000169486 Ccdc180J3QNE4 1664 aa25,55■■□□□ 1,68
Ebf3-204ENSMUST00000169486 Stra8P70278 393 aa25,52■■□□□ 1,68
Ebf3-204ENSMUST00000169486 Supt5hO55201 1082 aaKnown RBP25,41■■□□□ 1,66
Ebf3-204ENSMUST00000169486 Nop58Q6DFW4 536 aaKnown RBP25,32■■□□□ 1,64
Ebf3-204ENSMUST00000169486 Ppargc1bQ8VHJ7 1014 aa25,31■■□□□ 1,64
Ebf3-204ENSMUST00000169486 Abcc9P70170 1546 aa25,28■■□□□ 1,64
Ebf3-204ENSMUST00000169486 Myt1Q8CFC2 1127 aa25,17■■□□□ 1,62
Ebf3-204ENSMUST00000169486 Ttbk1Q6PCN3 1308 aa25,15■■□□□ 1,62
Ebf3-204ENSMUST00000169486 Tnnt3Q9QZ47 272 aa25,03■■□□□ 1,6
Ebf3-204ENSMUST00000169486 Rtl1Q7M732 1744 aa25,01■■□□□ 1,59
Ebf3-204ENSMUST00000169486 Il27Q8K3I6 234 aa24,98■■□□□ 1,59
Ebf3-204ENSMUST00000169486 NclP09405 707 aaKnown RBP24,93■■□□□ 1,58
Ebf3-204ENSMUST00000169486 Fam50aQ9WV03 339 aaKnown RBP24,92■■□□□ 1,58
Ebf3-204ENSMUST00000169486 Mier1Q5UAK0 511 aa24,88■■□□□ 1,57
Ebf3-204ENSMUST00000169486 Ap3b1Q9Z1T1 1105 aa24,87■■□□□ 1,57
Ebf3-204ENSMUST00000169486 NrdcQ8BHG1 1161 aa24,86■■□□□ 1,57
Ebf3-204ENSMUST00000169486 Eif5bQ05D44 1216 aaKnown RBP24,84■■□□□ 1,57
Ebf3-204ENSMUST00000169486 TonslQ6NZL6 1363 aa24,83■■□□□ 1,57
Ebf3-204ENSMUST00000169486 Neurod1Q60867 357 aa24,83■■□□□ 1,56
Ebf3-204ENSMUST00000169486 Abcc8B2RUS7 1588 aa24,82■■□□□ 1,56
Ebf3-204ENSMUST00000169486 4933416C03RikQ3V063 378 aa24,8■■□□□ 1,56
Ebf3-204ENSMUST00000169486 Zcchc6Q5BLK4 1491 aaKnown RBP24,78■■□□□ 1,56
Ebf3-204ENSMUST00000169486 Gm35339A0A140LHH9 1649 aa24,68■■□□□ 1,54
Ebf3-204ENSMUST00000169486 Anp32bQ9EST5 272 aaKnown RBP24,59■■□□□ 1,53
Ebf3-204ENSMUST00000169486 NeflP08551 543 aa24,58■■□□□ 1,53
Ebf3-204ENSMUST00000169486 ClspnQ80YR7 1315 aa24,51■■□□□ 1,51
Ebf3-204ENSMUST00000169486 Sall2Q9QX96 1004 aa24,41■■□□□ 1,5
Ebf3-204ENSMUST00000169486 Gm38655A0A286YDK6 273 aa24,4■■□□□ 1,5
Ebf3-204ENSMUST00000169486 Rtl5Q5DTT4 599 aa24,4■■□□□ 1,5
Ebf3-204ENSMUST00000169486 Plekhg3Q4VAC9 1341 aa24,34■■□□□ 1,49
Ebf3-204ENSMUST00000169486 4930567H17RikQ3V0K5 233 aa24,33■■□□□ 1,49
Ebf3-204ENSMUST00000169486 Csrnp3P59055 597 aa24,33■■□□□ 1,48
Ebf3-204ENSMUST00000169486 DiexfQ8BTT6 772 aaKnown RBP24,33■■□□□ 1,48
Ebf3-204ENSMUST00000169486 Anp32aO35381 247 aa24,28■■□□□ 1,48
Ebf3-204ENSMUST00000169486 Mapk8ip2Q9ERE9 830 aa24,27■■□□□ 1,48
Ebf3-204ENSMUST00000169486 Anks4bQ8K3X6 423 aa24,26■■□□□ 1,47
Ebf3-204ENSMUST00000169486 Os9Q8K2C7 672 aa24,22■■□□□ 1,47
Ebf3-204ENSMUST00000169486 Lmod2Q3UHZ5 550 aa24,2■■□□□ 1,46
Ebf3-204ENSMUST00000169486 Eid3Q3V124 375 aa24,16■■□□□ 1,46
Ebf3-204ENSMUST00000169486 Dcaf1Q80TR8 1506 aa24,1■■□□□ 1,45
Ebf3-204ENSMUST00000169486 DaxxO35613 739 aa24,04■■□□□ 1,44
Ebf3-204ENSMUST00000169486 Aplp2Q06335 707 aa24,04■■□□□ 1,44
Ebf3-204ENSMUST00000169486 Chic1Q8CBW7 227 aa23,95■■□□□ 1,42
Ebf3-204ENSMUST00000169486 Zbtb7cQ8VCZ7 619 aa23,95■■□□□ 1,42
Ebf3-204ENSMUST00000169486 Cep164Q5DU05 1446 aa23,87■■□□□ 1,41
Ebf3-204ENSMUST00000169486 Zbtb4Q5F293 982 aa23,85■■□□□ 1,41
Ebf3-204ENSMUST00000169486 Npm1Q61937 292 aaKnown RBP23,81■■□□□ 1,4
Ebf3-204ENSMUST00000169486 Clip1Q922J3 1391 aa23,79■■□□□ 1,4
Ebf3-204ENSMUST00000169486 Calr4Q3TQS0 420 aa23,75■■□□□ 1,39
Ebf3-204ENSMUST00000169486 Hnrnpul2Q00PI9 745 aaKnown RBP23,73■■□□□ 1,39
Ebf3-204ENSMUST00000169486 Ppp4r2Q0VGB7 417 aa23,71■■□□□ 1,39
Ebf3-204ENSMUST00000169486 Brd4Q9ESU6 1400 aaKnown RBP23,71■■□□□ 1,39
Ebf3-204ENSMUST00000169486 1700123L14RikQ3V2K7 440 aa23,7■■□□□ 1,39
Ebf3-204ENSMUST00000169486 Rb1cc1Q9ESK9 1588 aa23,68■■□□□ 1,38
Ebf3-204ENSMUST00000169486 ArxO35085 564 aa23,62■■□□□ 1,37
Ebf3-204ENSMUST00000169486 Prdm10Q3UTQ7 1184 aa23,57■■□□□ 1,36
Ebf3-204ENSMUST00000169486 Aebp2Q9Z248 504 aaKnown RBP23,56■■□□□ 1,36
Ebf3-204ENSMUST00000169486 Nlrp6Q91WS2 869 aa23,53■■□□□ 1,36
Ebf3-204ENSMUST00000169486 NacadQ5SWP3 1504 aa23,53■■□□□ 1,36
Ebf3-204ENSMUST00000169486 Polr3glQ8R0C0 218 aa23,53■■□□□ 1,36
Ebf3-204ENSMUST00000169486 Wdr43Q6ZQL4 677 aaKnown RBP23,52■■□□□ 1,36
Ebf3-204ENSMUST00000169486 Mrs2Q5NCE8 434 aa23,5■■□□□ 1,35
Ebf3-204ENSMUST00000169486 Ccer2J3QPU5 274 aa23,48■■□□□ 1,35
Ebf3-204ENSMUST00000169486 Erich6D3Z6S9 713 aa23,46■■□□□ 1,35
Ebf3-204ENSMUST00000169486 Fam71e1A1L3C1 212 aa23,41■■□□□ 1,34
Ebf3-204ENSMUST00000169486 Rad21Q61550 635 aaKnown RBP23,35■■□□□ 1,33
Ebf3-204ENSMUST00000169486 Chic2Q9D9G3 165 aa23,35■■□□□ 1,33
Ebf3-204ENSMUST00000169486 Ifnlr1Q8CGK5 535 aa23,31■■□□□ 1,32
Ebf3-204ENSMUST00000169486 Upf2A2AT37 1269 aaKnown RBP23,26■■□□□ 1,31
Ebf3-204ENSMUST00000169486 Ubl4bQ9CQ84 188 aa23,26■■□□□ 1,31
Ebf3-204ENSMUST00000169486 Fkbp15Q6P9Q6 1216 aaKnown RBP23,25■■□□□ 1,31
Ebf3-204ENSMUST00000169486 BlmO88700 1416 aa23,24■■□□□ 1,31
Ebf3-204ENSMUST00000169486 Atp1b4Q99ME6 356 aa23,23■■□□□ 1,31
Ebf3-204ENSMUST00000169486 Hsp90aa1P07901 733 aaKnown RBP23,2■■□□□ 1,3
Ebf3-204ENSMUST00000169486 Rangap1P46061 589 aaKnown RBP23,19■■□□□ 1,3
Retrieved 100 of 22,080 RNA–protein pairs in 26,1 ms