RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Hist1h2bfP10853 126 aa7.17□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 Gm10577Q3UDV9 132 aa7.17□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 Hist1h2bbQ64475 126 aa7.17□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 Hist1h2bkQ8CGP1 126 aaKnown RBP7.17□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 Hist1h2bpQ8CGP2 126 aaKnown RBP7.17□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 Cdk2ap2Q9CPY4 127 aa7.17□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 Slamf6Q9ET39 351 aa7.17□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 Msrb1Q9JLC3 116 aa7.17□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 Gm28230A0A0A0MQ91 144 aa7.16□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 Igkv1-110A0A0B4J1I0 119 aa7.16□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 Scgb1b3J3QJY4 93 aa7.16□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 C920008G01RikA0A0B4J1N1 112 aa7.15□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 Lect2O88803 151 aa7.15□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 SnrpeP62305 92 aaKnown RBP7.15□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 Try10Q792Z1 246 aaKnown RBP7.15□□□□□ -1.26
Ccdc28a-202ENSMUST00000080860 Igkv8-18A0A0B4J1J3 123 aa7.14□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Hsbp1l1B2RXB2 72 aa7.14□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Gm20458E9PXJ7 78 aa7.14□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Gm28305F6U473 122 aa7.14□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Tex54G3UW99 86 aa7.14□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Defa20Q45VN2 95 aa7.14□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Odf3bQ5M8M2 238 aa7.14□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Ube2aQ9Z255 152 aa7.14□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Gm29289A0A087WPY7 166 aa7.13□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Gm26727M0QWT1 121 aa7.13□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Ndufv3Q8BK30 104 aaKnown RBP7.13□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Ociad2Q9D8W7 154 aa7.13□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Phpt1Q9DAK9 124 aa7.13□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Timm17bQ9Z0V7 172 aa7.13□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Trav4n-4A0A075B615 110 aa7.12□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Krtap4-2B1AQ85 167 aa7.12□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Gm10139O88245 57 aa7.12□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Defa4P28311 92 aa7.12□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Cks1brtQ3UNC9 96 aa7.12□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Gm10770F7D043 238 aa7.11□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Gm10604Q3V0X7 143 aa7.11□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Lgals4Q8K419 326 aa7.11□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Wdr38Q9D994 303 aa7.11□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Cend1Q9JKC6 149 aa7.11□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Cd164Q9R0L9 197 aa7.11□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 2310034G01RikA0A286YDL3 209 aa7.1□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Gm5153P01627 120 aa7.1□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Vamp3P63024 103 aa7.1□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Gm7276Q3TYW4 209 aa7.1□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 LbhQ9CX60 105 aa7.1□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Plac1Q9JI83 173 aa7.1□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Ighv1-62-2A0A0A6YXZ4 119 aa7.09□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Hist2h2beQ64524 126 aa7.09□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Mrpl52Q9D0Y8 121 aa7.09□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Triap1Q9D8Z2 76 aa7.09□□□□□ -1.27
Ccdc28a-202ENSMUST00000080860 Trav4d-3A0A075B625 110 aa7.08□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Gm44965A0A0N4SVR3 59 aa7.08□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Gm10295Q8CCF3 114 aa7.08□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 S100a1P56565 94 aa7.07□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 H2al1nQ497L1 109 aa7.07□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 TeppQ6IMH0 216 aa7.07□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 BC048502Q80Y74 154 aa7.07□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Znf706Q9D115 76 aaKnown RBP7.07□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Anapc11Q9CPX9 84 aa7.06□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Q9DAA7 145 aa7.06□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 4930415O20RikQ8CDT5 131 aa7.05□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Cystm1Q8K353 104 aa7.05□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Hbb-bsA8DUK4 147 aa7.04□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Scgb1b19F6WYW0 93 aa7.04□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Gm9805F6YK59 57 aa7.04□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Hbb-b1P02088 147 aa7.04□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Gm10767Q3TQP0 103 aa7.04□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Dpm2Q9Z324 84 aa7.04□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Gm17689B3GLJ4 109 aa7.03□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Cops9Q3U898 57 aa7.03□□□□□ -1.28
Ccdc28a-202ENSMUST00000080860 Igkv1-117A0A140T8M0 119 aa7.02□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Glrp1E9Q9S8 174 aa7.02□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Gm7102J3QQ10 178 aa7.02□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Defb45Q3V490 66 aa7.02□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Lage3Q9CR70 148 aa7.02□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Gm9376G3UW68 176 aa7.01□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Lst1O08843 95 aa7.01□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Smim1P0C8K7 78 aa7.01□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 A930002H24RikQ8C8Y3 163 aa7.01□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Spata45Q9CVW4 97 aa7.01□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Gm45753A0A1C7CYU8 86 aa7□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Gm11020F6ZGD5 61 aa7□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Cypt14J3QPF7 87 aa7□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 P0C913 63 aa7□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 GhrhP16043 103 aa7□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Elof1P60003 83 aa7□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Gnb1lQ9EQ15 326 aa7□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 MalO09198 153 aa6.99□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Rps29P62274 56 aa6.99□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Defa22Q8C1N8 93 aa6.99□□□□□ -1.29
Ccdc28a-202ENSMUST00000080860 Trappc1Q5NCF2 145 aa6.95□□□□□ -1.3
Ccdc28a-202ENSMUST00000080860 Igkv3-5A0A140T8M6 119 aa6.94□□□□□ -1.3
Ccdc28a-202ENSMUST00000080860 Defa25Q5G864 92 aa6.94□□□□□ -1.3
Ccdc28a-202ENSMUST00000080860 Gm5868Q8BJG1 145 aa6.94□□□□□ -1.3
Ccdc28a-202ENSMUST00000080860 Gm10320E9PW43 113 aa6.93□□□□□ -1.3
Ccdc28a-202ENSMUST00000080860 Igkv8-26A0A075B5N5 123 aa6.92□□□□□ -1.3
Ccdc28a-202ENSMUST00000080860 Gm5965D3Z724 196 aa6.92□□□□□ -1.3
Ccdc28a-202ENSMUST00000080860 Plscr4P58196 326 aa6.92□□□□□ -1.3
Ccdc28a-202ENSMUST00000080860 Wfdc13Q5DQQ6 81 aa6.92□□□□□ -1.3
Ccdc28a-202ENSMUST00000080860 Eif4ebp3Q80VV3 101 aa6.92□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms