RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Odf3l2Q3TZ65 277 aa4.86□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Dph3Q8K0W9 82 aa4.86□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Ormdl1Q921I0 153 aa4.86□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Igkv4-58A0A0G2JGI6 119 aa4.86□□□□□ -1.63
Clrn1-202ENSMUST00000055636 B230307C23RikQ8BLB2 64 aa4.86□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Sprr1bQ62267 153 aa4.86□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Brk1Q91VR8 75 aa4.86□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Gm43218A0A0G2JGT0 114 aa4.85□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Defb10Q8R2I8 73 aa4.85□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Trbv13-2A0A140T8N6 113 aa4.85□□□□□ -1.63
Clrn1-202ENSMUST00000055636 E130114P18RikF6S0S7 154 aa4.85□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Wfdc12Q9JHY3 85 aa4.85□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Gm11213A0A1B0GR83 88 aa4.84□□□□□ -1.63
Clrn1-202ENSMUST00000055636 CnbpP53996 178 aaKnown RBP4.84□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Fam19a3Q7TPG6 132 aa4.84□□□□□ -1.63
Clrn1-202ENSMUST00000055636 SnurfQ9WU12 71 aa4.84□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Igkv1-110A0A0B4J1I0 119 aa4.84□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Gm17689B3GLJ4 109 aa4.84□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Wfdc6bF6ULY1 148 aa4.84□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Spink4O35679 86 aa4.84□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Defa20Q45VN2 95 aa4.84□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Ubl5Q9EPV8 73 aa4.84□□□□□ -1.63
Clrn1-202ENSMUST00000055636 Igkv8-26A0A075B5N5 123 aa4.83□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Igkv4-61A0A0G2JH00 117 aa4.83□□□□□ -1.64
Clrn1-202ENSMUST00000055636 P01819 144 aa4.83□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Sslp1Q3UN54 99 aa4.83□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Trav9n-4A0A075B631 113 aa4.83□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Gm10518F6UQQ9 182 aa4.83□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Cd164Q9R0L9 197 aa4.83□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Dnah14A0A140LIJ4 4489 aa4.82□□□□□ -1.64
Clrn1-202ENSMUST00000055636 BikO70337 150 aa4.82□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Phxr5P08399 672 aa4.82□□□□□ -1.64
Clrn1-202ENSMUST00000055636 A930002H24RikQ8C8Y3 163 aa4.82□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Gm9805F6YK59 57 aa4.81□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Tcl1b3P56842 122 aa4.81□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Dnah6E9Q0B6 4144 aa4.81□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Gm9508A0A1W2P7W0 230 aa4.81□□□□□ -1.64
Clrn1-202ENSMUST00000055636 A730071L15RikQ8C4X0 137 aa4.81□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Igkv8-16A0A0G2JDG9 121 aa4.81□□□□□ -1.64
Clrn1-202ENSMUST00000055636 A830005F24RikQ8BRT5 167 aa4.81□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Csmd3Q80T79 3707 aa4.81□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Inafm2A0A1L1STD6 152 aa4.8□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Cox7bP56393 80 aa4.8□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Kmt2aP55200 3966 aa4.8□□□□□ -1.64
Clrn1-202ENSMUST00000055636 E130218I03RikA0A0U1RNU5 63 aa4.8□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Reg3dQ9QUS9 175 aa4.8□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Megf8P60882 2789 aa4.8□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Stab2Q8R4U0 2559 aa4.79□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Krtap11-1E9Q2E9 183 aa4.79□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Msrb1Q9JLC3 116 aa4.79□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Ighv2-5A0A0A6YY69 116 aa4.79□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Ighv10-1A0A0B4J1J6 119 aa4.78□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Cmc4Q61908 68 aa4.78□□□□□ -1.64
Clrn1-202ENSMUST00000055636 4930556J24RikQ9D4U7 146 aa4.78□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Dnah7bL7N1Y0 4068 aa4.78□□□□□ -1.64
Clrn1-202ENSMUST00000055636 FasnP19096 2504 aaKnown RBP4.78□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Igkv8-24A0A140T8P5 121 aa4.78□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Gm10770F7D043 238 aa4.78□□□□□ -1.64
Clrn1-202ENSMUST00000055636 9530003J23RikQ8BM26 151 aa4.78□□□□□ -1.64
Clrn1-202ENSMUST00000055636 FcgbpE9Q0B5 2583 aa4.78□□□□□ -1.64
Clrn1-202ENSMUST00000055636 Muc6Q80T03 2850 aa4.77□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Tenm2Q9WTS5 2764 aa4.77□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Igkv3-9A0A140T8P4 119 aa4.77□□□□□ -1.65
Clrn1-202ENSMUST00000055636 AY074887Q8R5F9 132 aa4.77□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Igkv8-34A0A0G2JDU0 121 aa4.76□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Defb37Q7TMD2 62 aa4.76□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Defa27F2Z403 93 aa4.76□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Rbm3O89086 153 aaKnown RBP4.76□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Igkv3-1A0A075B5P1 119 aa4.76□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Igkv8-28A0A0G2JE47 121 aa4.76□□□□□ -1.65
Clrn1-202ENSMUST00000055636 A0A286YCN5 57 aa4.76□□□□□ -1.65
Clrn1-202ENSMUST00000055636 6430550D23RikE9Q1X6 194 aa4.76□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Psors1c2Q80ZC9 134 aa4.76□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Ndufc1Q9CQY9 76 aa4.76□□□□□ -1.65
Clrn1-202ENSMUST00000055636 2310034G01RikA0A286YDL3 209 aa4.75□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Reg3bP35230 175 aa4.75□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Gm10643Q3URG9 111 aa4.75□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Snhg11Q4G0K9 87 aa4.75□□□□□ -1.65
Clrn1-202ENSMUST00000055636 A530084C06RikQ3UTW2 186 aa4.74□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Gm28374F6SG70 93 aa4.74□□□□□ -1.65
Clrn1-202ENSMUST00000055636 A330070K13RikQ8CA53 115 aa4.74□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Spata3Q9D9T6 193 aa4.74□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Ighv2-2A0A075B5P8 116 aa4.73□□□□□ -1.65
Clrn1-202ENSMUST00000055636 P01821 116 aa4.73□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Ighv8-13A0A075B5Y0 101 aa4.73□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Trav14-1A0A0G2JF94 121 aa4.73□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Igkv1-88A0A140T8N1 120 aa4.73□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Pet100P0DJE0 76 aa4.72□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Tcl1b5P56845 121 aa4.72□□□□□ -1.65
Clrn1-202ENSMUST00000055636 UqcrqQ9CQ69 82 aa4.72□□□□□ -1.65
Clrn1-202ENSMUST00000055636 P06320 134 aa4.72□□□□□ -1.65
Clrn1-202ENSMUST00000055636 AplnQ9R0R4 77 aa4.72□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Dnah3Q8BW94 4083 aa4.72□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Q8BT88 171 aa4.71□□□□□ -1.65
Clrn1-202ENSMUST00000055636 Pde6gP09174 87 aa4.71□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Elof1P60003 83 aa4.71□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Klk9Q32M27 251 aa4.71□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Vpreb2P13373 142 aa4.71□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Ufsp1Q9CZP0 217 aa4.71□□□□□ -1.66
Clrn1-202ENSMUST00000055636 A730009L09RikA0A1B0GS82 72 aa4.7□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 82.1 ms