RNA–Protein interactions for RNA: ENSMUST00000043359.8

Smarca5-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarca5, Length 6,113 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca5-201ENSMUST00000043359 Gm44790A0A0N4SV91 103 aa9.9□□□□□ -0.82
Smarca5-201ENSMUST00000043359 Usp24B1AY13 2617 aaKnown RBP9.89□□□□□ -0.83
Smarca5-201ENSMUST00000043359 Gm10135F6TEE5 83 aa9.88□□□□□ -0.83
Smarca5-201ENSMUST00000043359 CenpwQ3URR0 86 aa9.87□□□□□ -0.83
Smarca5-201ENSMUST00000043359 Gm43218A0A0G2JGT0 114 aa9.87□□□□□ -0.83
Smarca5-201ENSMUST00000043359 Anapc11Q9CPX9 84 aa9.86□□□□□ -0.83
Smarca5-201ENSMUST00000043359 Ighv2-2A0A075B5P8 116 aa9.86□□□□□ -0.83
Smarca5-201ENSMUST00000043359 P01821 116 aa9.86□□□□□ -0.83
Smarca5-201ENSMUST00000043359 Gm27235Q3UW50 83 aa9.86□□□□□ -0.83
Smarca5-201ENSMUST00000043359 Gm26661M0QWV4 156 aa9.84□□□□□ -0.83
Smarca5-201ENSMUST00000043359 Csdc2Q91YQ3 154 aa9.84□□□□□ -0.83
Smarca5-201ENSMUST00000043359 Map1aQ9QYR6 2776 aa9.83□□□□□ -0.84
Smarca5-201ENSMUST00000043359 Akap13E9Q394 2776 aa9.83□□□□□ -0.84
Smarca5-201ENSMUST00000043359 MobpQ9D2P8 170 aa9.82□□□□□ -0.84
Smarca5-201ENSMUST00000043359 Ypel4Q65Z93 127 aa9.82□□□□□ -0.84
Smarca5-201ENSMUST00000043359 SnurfQ9WU12 71 aa9.82□□□□□ -0.84
Smarca5-201ENSMUST00000043359 Gm10160F6Y577 67 aa9.81□□□□□ -0.84
Smarca5-201ENSMUST00000043359 Gm28539A0A087WSL9 92 aa9.8□□□□□ -0.84
Smarca5-201ENSMUST00000043359 7530416G11RikJ3QJX6 159 aa9.8□□□□□ -0.84
Smarca5-201ENSMUST00000043359 Fn1P11276 2477 aaKnown RBP9.8□□□□□ -0.84
Smarca5-201ENSMUST00000043359 Krtap11-1E9Q2E9 183 aa9.8□□□□□ -0.84
Smarca5-201ENSMUST00000043359 Pla2g10Q9QXX3 151 aa9.8□□□□□ -0.84
Smarca5-201ENSMUST00000043359 Q8BT88 171 aa9.79□□□□□ -0.84
Smarca5-201ENSMUST00000043359 Ankrd17Q99NH0 2603 aaKnown RBP9.79□□□□□ -0.84
Smarca5-201ENSMUST00000043359 Gm20661K7N787 53 aa9.79□□□□□ -0.84
Smarca5-201ENSMUST00000043359 BC025920Q3US60 128 aa9.79□□□□□ -0.84
Smarca5-201ENSMUST00000043359 Limd2Q8BGB5 128 aa9.78□□□□□ -0.84
Smarca5-201ENSMUST00000043359 4930507D05RikQ8C9C9 103 aa9.78□□□□□ -0.84
Smarca5-201ENSMUST00000043359 Rnase13Q5GAM7 153 aa9.77□□□□□ -0.84
Smarca5-201ENSMUST00000043359 Cep350E9Q309 3095 aa9.77□□□□□ -0.85
Smarca5-201ENSMUST00000043359 Prune2Q52KR3 3084 aa9.77□□□□□ -0.85
Smarca5-201ENSMUST00000043359 Gm7173A0A0G2JEB6 3132 aa9.76□□□□□ -0.85
Smarca5-201ENSMUST00000043359 Elof1P60003 83 aa9.76□□□□□ -0.85
Smarca5-201ENSMUST00000043359 Notch1Q01705 2531 aa9.76□□□□□ -0.85
Smarca5-201ENSMUST00000043359 3110070M22RikQ9DAQ7 118 aa9.75□□□□□ -0.85
Smarca5-201ENSMUST00000043359 Defb9Q8R2I6 67 aa9.74□□□□□ -0.85
Smarca5-201ENSMUST00000043359 Gm10770F7D043 238 aa9.74□□□□□ -0.85
Smarca5-201ENSMUST00000043359 Spink13Q3UTS8 97 aa9.73□□□□□ -0.85
Smarca5-201ENSMUST00000043359 Chd6A3KFM7 2711 aa9.72□□□□□ -0.85
Smarca5-201ENSMUST00000043359 Gm10772F7AIG4 85 aa9.72□□□□□ -0.85
Smarca5-201ENSMUST00000043359 Hcfc1Q61191 2045 aaKnown RBP9.71□□□□□ -0.85
Smarca5-201ENSMUST00000043359 Sostdc1Q9CQN4 206 aa9.71□□□□□ -0.86
Smarca5-201ENSMUST00000043359 UtrnE9Q6R7 3430 aa9.7□□□□□ -0.86
Smarca5-201ENSMUST00000043359 CenpfE9Q3P4 2997 aaKnown RBP9.69□□□□□ -0.86
Smarca5-201ENSMUST00000043359 FlnaQ8BTM8 2647 aaKnown RBP9.68□□□□□ -0.86
Smarca5-201ENSMUST00000043359 Dnah12Q3V0Q1 3086 aa9.67□□□□□ -0.86
Smarca5-201ENSMUST00000043359 Gcn1E9PVA8 2671 aaKnown RBP9.67□□□□□ -0.86
Smarca5-201ENSMUST00000043359 Coa6Q8BGD8 79 aa9.67□□□□□ -0.86
Smarca5-201ENSMUST00000043359 Nsd1O88491 2588 aaKnown RBP9.66□□□□□ -0.86
Smarca5-201ENSMUST00000043359 Phxr5P08399 672 aa9.65□□□□□ -0.86
Smarca5-201ENSMUST00000043359 Spint4Q9D263 159 aa9.64□□□□□ -0.87
Smarca5-201ENSMUST00000043359 A330070K13RikQ8CA53 115 aa9.64□□□□□ -0.87
Smarca5-201ENSMUST00000043359 Gm9821Q8K076 103 aa9.63□□□□□ -0.87
Smarca5-201ENSMUST00000043359 Gm10197F6QEY5 67 aa9.63□□□□□ -0.87
Smarca5-201ENSMUST00000043359 Stab1Q8R4Y4 2571 aa9.63□□□□□ -0.87
Smarca5-201ENSMUST00000043359 Tnrc18Q80WC3 2878 aa9.61□□□□□ -0.87
Smarca5-201ENSMUST00000043359 Sprr4Q8CGN8 76 aa9.6□□□□□ -0.87
Smarca5-201ENSMUST00000043359 Crip3Q6Q6R3 243 aa9.59□□□□□ -0.87
Smarca5-201ENSMUST00000043359 Mp68P56379 58 aa9.58□□□□□ -0.88
Smarca5-201ENSMUST00000043359 Jbts17Q8CE72 3214 aa9.58□□□□□ -0.88
Smarca5-201ENSMUST00000043359 Ubr5Q80TP3 2792 aa9.58□□□□□ -0.88
Smarca5-201ENSMUST00000043359 Itpr3P70227 2670 aa9.57□□□□□ -0.88
Smarca5-201ENSMUST00000043359 Spink7Q6IE32 76 aa9.57□□□□□ -0.88
Smarca5-201ENSMUST00000043359 Gm19935A0A1B0GSF9 52 aa9.57□□□□□ -0.88
Smarca5-201ENSMUST00000043359 Cypt15B1AXS0 87 aa9.54□□□□□ -0.88
Smarca5-201ENSMUST00000043359 Lelp1Q9DAE3 120 aa9.53□□□□□ -0.88
Smarca5-201ENSMUST00000043359 AW011738F6S7Q2 159 aa9.53□□□□□ -0.88
Smarca5-201ENSMUST00000043359 Gm36176A0A1W2P8D5 158 aa9.53□□□□□ -0.88
Smarca5-201ENSMUST00000043359 Lypd5Q9D7Z7 256 aa9.53□□□□□ -0.88
Smarca5-201ENSMUST00000043359 4930518I15RikQ3V2W7 57 aa9.51□□□□□ -0.89
Smarca5-201ENSMUST00000043359 Igsf10Q3V1M1 2594 aa9.51□□□□□ -0.89
Smarca5-201ENSMUST00000043359 Gm9508A0A1W2P7W0 230 aa9.5□□□□□ -0.89
Smarca5-201ENSMUST00000043359 Sprr1bQ62267 153 aa9.48□□□□□ -0.89
Smarca5-201ENSMUST00000043359 Gm10337F7DEP7 55 aa9.47□□□□□ -0.89
Smarca5-201ENSMUST00000043359 Col6a5A6H584 2640 aa9.47□□□□□ -0.89
Smarca5-201ENSMUST00000043359 NipblQ6KCD5 2798 aaKnown RBP9.47□□□□□ -0.89
Smarca5-201ENSMUST00000043359 Gm20538F6Z9R1 75 aa9.46□□□□□ -0.89
Smarca5-201ENSMUST00000043359 Gm17349F7BGH6 99 aa9.46□□□□□ -0.9
Smarca5-201ENSMUST00000043359 Gm26620Q9CY65 116 aa9.45□□□□□ -0.9
Smarca5-201ENSMUST00000043359 Chtf8P0CG14 533 aa9.45□□□□□ -0.9
Smarca5-201ENSMUST00000043359 AI854703Q8BIN3 203 aa9.45□□□□□ -0.9
Smarca5-201ENSMUST00000043359 Chd7A2AJK6 2986 aaKnown RBP9.45□□□□□ -0.9
Smarca5-201ENSMUST00000043359 Krtap26-1Q9D7N2 215 aa9.44□□□□□ -0.9
Smarca5-201ENSMUST00000043359 Lama3Q61789 3330 aa9.43□□□□□ -0.9
Smarca5-201ENSMUST00000043359 Krtap15-1Q9QZU5 150 aa9.43□□□□□ -0.9
Smarca5-201ENSMUST00000043359 Fbn2Q61555 2907 aa9.42□□□□□ -0.9
Smarca5-201ENSMUST00000043359 Cdc42se1Q8BHL7 80 aa9.4□□□□□ -0.9
Smarca5-201ENSMUST00000043359 AY074887Q8R5F9 132 aa9.4□□□□□ -0.9
Smarca5-201ENSMUST00000043359 KalrnA2CG49 2964 aa9.4□□□□□ -0.9
Smarca5-201ENSMUST00000043359 Pkd1l1Q8R526 2615 aa9.4□□□□□ -0.9
Smarca5-201ENSMUST00000043359 Psors1c2Q80ZC9 134 aa9.39□□□□□ -0.91
Smarca5-201ENSMUST00000043359 Kmt2bO08550 2713 aa9.39□□□□□ -0.91
Smarca5-201ENSMUST00000043359 Mki67E9PVX6 3177 aaKnown RBP9.39□□□□□ -0.91
Smarca5-201ENSMUST00000043359 Muc2Q80Z19 2680 aa9.38□□□□□ -0.91
Smarca5-201ENSMUST00000043359 C530025M09RikF6RGA8 229 aa9.36□□□□□ -0.91
Smarca5-201ENSMUST00000043359 Dmbt1Q60997 2085 aa9.35□□□□□ -0.91
Smarca5-201ENSMUST00000043359 Tep1P97499 2629 aa9.35□□□□□ -0.91
Smarca5-201ENSMUST00000043359 HttP42859 3119 aa9.33□□□□□ -0.92
Smarca5-201ENSMUST00000043359 Prrc2cQ3TLH4 2846 aaKnown RBP9.32□□□□□ -0.92
Smarca5-201ENSMUST00000043359 MgaA2AWL7 3003 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 72.7 ms