RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Dnah14A0A140LIJ4 4489 aa14.86□□□□□ -0.03
Ptx3-201ENSMUST00000029421 4930518I15RikQ3V2W7 57 aa14.86□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Tmem243B2RVB9 118 aa14.85□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Prh1P05142 261 aa14.85□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Defa7P50705 93 aa14.84□□□□□ -0.03
Ptx3-201ENSMUST00000029421 B9d2Q3UK10 175 aa14.84□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Gm17509Q9CZ61 145 aa14.84□□□□□ -0.03
Ptx3-201ENSMUST00000029421 AplnQ9R0R4 77 aa14.84□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Igkv3-1A0A075B5P1 119 aa14.84□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Lamtor3O88653 124 aa14.84□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Igkv4-92A0A0B4J1I2 117 aa14.83□□□□□ -0.04
Ptx3-201ENSMUST00000029421 Gm11213A0A1B0GR83 88 aa14.83□□□□□ -0.04
Ptx3-201ENSMUST00000029421 AY074887Q8R5F9 132 aa14.83□□□□□ -0.04
Ptx3-201ENSMUST00000029421 9430015G10RikA2ASP7 199 aa14.82□□□□□ -0.04
Ptx3-201ENSMUST00000029421 BC048502Q80Y74 154 aa14.82□□□□□ -0.04
Ptx3-201ENSMUST00000029421 9530003J23RikQ8BM26 151 aa14.82□□□□□ -0.04
Ptx3-201ENSMUST00000029421 Ighv2-2A0A075B5P8 116 aa14.81□□□□□ -0.04
Ptx3-201ENSMUST00000029421 Gm10320E9PW43 113 aa14.81□□□□□ -0.04
Ptx3-201ENSMUST00000029421 P01821 116 aa14.81□□□□□ -0.04
Ptx3-201ENSMUST00000029421 Igkv4-58A0A0G2JGI6 119 aa14.8□□□□□ -0.04
Ptx3-201ENSMUST00000029421 Krtap11-1E9Q2E9 183 aa14.8□□□□□ -0.04
Ptx3-201ENSMUST00000029421 Gm20726G3UX18 150 aa14.8□□□□□ -0.04
Ptx3-201ENSMUST00000029421 Rbm3O89086 153 aaKnown RBP14.8□□□□□ -0.04
Ptx3-201ENSMUST00000029421 EnhoQ8K1D8 76 aa14.8□□□□□ -0.04
Ptx3-201ENSMUST00000029421 Cystm1Q8K353 104 aa14.8□□□□□ -0.04
Ptx3-201ENSMUST00000029421 Cox7b2Q9D2H1 82 aa14.79□□□□□ -0.04
Ptx3-201ENSMUST00000029421 Wfdc12Q9JHY3 85 aa14.79□□□□□ -0.04
Ptx3-201ENSMUST00000029421 Defa21Q8C1P2 93 aa14.77□□□□□ -0.05
Ptx3-201ENSMUST00000029421 Reg3bP35230 175 aa14.74□□□□□ -0.05
Ptx3-201ENSMUST00000029421 Fam19a1Q7TPG8 133 aa14.74□□□□□ -0.05
Ptx3-201ENSMUST00000029421 Msrb1Q9JLC3 116 aa14.74□□□□□ -0.05
Ptx3-201ENSMUST00000029421 Gm4707V9GXN5 68 aa14.74□□□□□ -0.05
Ptx3-201ENSMUST00000029421 Elof1P60003 83 aa14.73□□□□□ -0.05
Ptx3-201ENSMUST00000029421 Cdk2ap2Q9CPY4 127 aa14.73□□□□□ -0.05
Ptx3-201ENSMUST00000029421 Samd13D3YUG0 102 aa14.72□□□□□ -0.05
Ptx3-201ENSMUST00000029421 Ufsp1Q9CZP0 217 aa14.72□□□□□ -0.05
Ptx3-201ENSMUST00000029421 E130218I03RikA0A0U1RNU5 63 aa14.71□□□□□ -0.05
Ptx3-201ENSMUST00000029421 2310034G01RikA0A286YDL3 209 aa14.71□□□□□ -0.05
Ptx3-201ENSMUST00000029421 Gm17349F7BGH6 99 aa14.69□□□□□ -0.06
Ptx3-201ENSMUST00000029421 4930535I16RikQ9CUI2 172 aa14.69□□□□□ -0.06
Ptx3-201ENSMUST00000029421 Naa38Q9D2U5 125 aa14.69□□□□□ -0.06
Ptx3-201ENSMUST00000029421 MplkipQ9D011 178 aa14.69□□□□□ -0.06
Ptx3-201ENSMUST00000029421 Gm5617Q91VN2 117 aa14.68□□□□□ -0.06
Ptx3-201ENSMUST00000029421 Dnah17Q69Z23 4481 aa14.68□□□□□ -0.06
Ptx3-201ENSMUST00000029421 AW011738F6S7Q2 159 aa14.67□□□□□ -0.06
Ptx3-201ENSMUST00000029421 Gm17577J3QNF7 156 aa14.67□□□□□ -0.06
Ptx3-201ENSMUST00000029421 Trav14-1A0A0G2JF94 121 aa14.66□□□□□ -0.06
Ptx3-201ENSMUST00000029421 Gm7276Q3TYW4 209 aa14.66□□□□□ -0.06
Ptx3-201ENSMUST00000029421 Ighv13-2A0A0A6YWN3 119 aa14.65□□□□□ -0.06
Ptx3-201ENSMUST00000029421 Defa4P28311 92 aa14.65□□□□□ -0.06
Ptx3-201ENSMUST00000029421 Defa23Q5G866 93 aa14.64□□□□□ -0.07
Ptx3-201ENSMUST00000029421 A730071L15RikQ8C4X0 137 aa14.63□□□□□ -0.07
Ptx3-201ENSMUST00000029421 B230307C23RikQ8BLB2 64 aa14.61□□□□□ -0.07
Ptx3-201ENSMUST00000029421 Igkv1-110A0A0B4J1I0 119 aa14.61□□□□□ -0.07
Ptx3-201ENSMUST00000029421 Defa20Q45VN2 95 aa14.6□□□□□ -0.07
Ptx3-201ENSMUST00000029421 Camk2n2Q78WH7 79 aa14.6□□□□□ -0.07
Ptx3-201ENSMUST00000029421 A730009L09RikA0A1B0GS82 72 aa14.59□□□□□ -0.07
Ptx3-201ENSMUST00000029421 Smlr1J3QMJ4 66 aa14.58□□□□□ -0.08
Ptx3-201ENSMUST00000029421 Sprr4Q8CGN8 76 aa14.58□□□□□ -0.08
Ptx3-201ENSMUST00000029421 A830005F24RikQ8BRT5 167 aa14.57□□□□□ -0.08
Ptx3-201ENSMUST00000029421 Igkv1-88A0A140T8N1 120 aa14.56□□□□□ -0.08
Ptx3-201ENSMUST00000029421 Sfta2E9PXB6 77 aa14.55□□□□□ -0.08
Ptx3-201ENSMUST00000029421 Cd164Q9R0L9 197 aa14.55□□□□□ -0.08
Ptx3-201ENSMUST00000029421 Dnah1E9Q8T7 4250 aa14.55□□□□□ -0.08
Ptx3-201ENSMUST00000029421 Gm9508A0A1W2P7W0 230 aa14.54□□□□□ -0.08
Ptx3-201ENSMUST00000029421 Igkv8-28A0A0G2JE47 121 aa14.53□□□□□ -0.08
Ptx3-201ENSMUST00000029421 Sprr2jO70561 109 aa14.53□□□□□ -0.08
Ptx3-201ENSMUST00000029421 H2al1aQ5M8Q2 105 aa14.53□□□□□ -0.08
Ptx3-201ENSMUST00000029421 Gm17689B3GLJ4 109 aa14.5□□□□□ -0.09
Ptx3-201ENSMUST00000029421 Fam229bQ8CF36 80 aa14.5□□□□□ -0.09
Ptx3-201ENSMUST00000029421 Pou2af1Q64693 256 aa14.5□□□□□ -0.09
Ptx3-201ENSMUST00000029421 Gm16485Q8C4B7 115 aa14.5□□□□□ -0.09
Ptx3-201ENSMUST00000029421 Vpreb2P13373 142 aa14.49□□□□□ -0.09
Ptx3-201ENSMUST00000029421 BikO70337 150 aa14.48□□□□□ -0.09
Ptx3-201ENSMUST00000029421 A0A286YCN5 57 aa14.47□□□□□ -0.09
Ptx3-201ENSMUST00000029421 Dnah7bL7N1Y0 4068 aa14.47□□□□□ -0.09
Ptx3-201ENSMUST00000029421 Fam19a3Q7TPG6 132 aa14.46□□□□□ -0.1
Ptx3-201ENSMUST00000029421 Defb11Q8R2I7 77 aa14.46□□□□□ -0.1
Ptx3-201ENSMUST00000029421 Serp1Q9Z1W5 66 aa14.46□□□□□ -0.1
Ptx3-201ENSMUST00000029421 FcgbpE9Q0B5 2583 aa14.45□□□□□ -0.1
Ptx3-201ENSMUST00000029421 Huwe1Q7TMY8 4377 aaKnown RBP14.44□□□□□ -0.1
Ptx3-201ENSMUST00000029421 2310061N02RikQ9D6S9 174 aa14.44□□□□□ -0.1
Ptx3-201ENSMUST00000029421 Csmd3Q80T79 3707 aa14.43□□□□□ -0.1
Ptx3-201ENSMUST00000029421 Dync2h1Q45VK7 4306 aa14.42□□□□□ -0.1
Ptx3-201ENSMUST00000029421 Fam19a5Q91WE9 132 aa14.42□□□□□ -0.1
Ptx3-201ENSMUST00000029421 Pet100P0DJE0 76 aa14.41□□□□□ -0.1
Ptx3-201ENSMUST00000029421 UqcrqQ9CQ69 82 aa14.41□□□□□ -0.1
Ptx3-201ENSMUST00000029421 Dmac1Q9CQ00 111 aa14.4□□□□□ -0.1
Ptx3-201ENSMUST00000029421 Gm11627A6PWP4 55 aa14.4□□□□□ -0.1
Ptx3-201ENSMUST00000029421 Igkv1-122A0A140T8M9 119 aa14.39□□□□□ -0.11
Ptx3-201ENSMUST00000029421 Defb37Q7TMD2 62 aa14.39□□□□□ -0.11
Ptx3-201ENSMUST00000029421 P06320 134 aa14.38□□□□□ -0.11
Ptx3-201ENSMUST00000029421 Cox6a2P43023 97 aa14.37□□□□□ -0.11
Ptx3-201ENSMUST00000029421 Gm12353A2AGJ4 60 aa14.36□□□□□ -0.11
Ptx3-201ENSMUST00000029421 Brk1Q91VR8 75 aa14.35□□□□□ -0.11
Ptx3-201ENSMUST00000029421 A930002H24RikQ8C8Y3 163 aa14.33□□□□□ -0.12
Ptx3-201ENSMUST00000029421 Pkd1l1Q8R526 2615 aa14.32□□□□□ -0.12
Ptx3-201ENSMUST00000029421 Prol1E9PYQ4 312 aa14.31□□□□□ -0.12
Ptx3-201ENSMUST00000029421 Stab2Q8R4U0 2559 aa14.31□□□□□ -0.12
Ptx3-201ENSMUST00000029421 Gm37389A0A0A6YW05 95 aa14.3□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms