RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Defb38Q7TNV7 63 aa8.7□□□□□ -1.02
Msh6-201ENSMUST00000005503 Lypd5Q9D7Z7 256 aa8.7□□□□□ -1.02
Msh6-201ENSMUST00000005503 Csmd1Q923L3 3564 aa8.7□□□□□ -1.02
Msh6-201ENSMUST00000005503 A730009L09RikA0A1B0GS82 72 aa8.69□□□□□ -1.02
Msh6-201ENSMUST00000005503 Gm17689B3GLJ4 109 aa8.69□□□□□ -1.02
Msh6-201ENSMUST00000005503 E130114P18RikF6S0S7 154 aa8.69□□□□□ -1.02
Msh6-201ENSMUST00000005503 Sprr2jO70561 109 aa8.69□□□□□ -1.02
Msh6-201ENSMUST00000005503 Ighv2-9A0A075B5Q5 116 aa8.68□□□□□ -1.02
Msh6-201ENSMUST00000005503 Gm43218A0A0G2JGT0 114 aa8.68□□□□□ -1.02
Msh6-201ENSMUST00000005503 Igkv8-21A0A140T8P7 120 aa8.68□□□□□ -1.02
Msh6-201ENSMUST00000005503 9230102O04RikA2ASX7 82 aa8.68□□□□□ -1.02
Msh6-201ENSMUST00000005503 Utp20Q5XG71 2788 aaKnown RBP8.68□□□□□ -1.02
Msh6-201ENSMUST00000005503 Igkv3-5A0A140T8M6 119 aa8.67□□□□□ -1.02
Msh6-201ENSMUST00000005503 1810062G17RikG3X8Y2 129 aa8.67□□□□□ -1.02
Msh6-201ENSMUST00000005503 1700012A03RikQ9DAF1 130 aa8.67□□□□□ -1.02
Msh6-201ENSMUST00000005503 P01819 144 aa8.67□□□□□ -1.02
Msh6-201ENSMUST00000005503 Gm17509Q9CZ61 145 aa8.67□□□□□ -1.02
Msh6-201ENSMUST00000005503 Gm10570F6VB42 170 aa8.67□□□□□ -1.02
Msh6-201ENSMUST00000005503 Rps28P62858 69 aaKnown RBP8.67□□□□□ -1.02
Msh6-201ENSMUST00000005503 UqcrqQ9CQ69 82 aa8.67□□□□□ -1.02
Msh6-201ENSMUST00000005503 Celsr2Q9R0M0 2920 aa8.66□□□□□ -1.02
Msh6-201ENSMUST00000005503 6430550D23RikE9Q1X6 194 aa8.66□□□□□ -1.02
Msh6-201ENSMUST00000005503 Igkv3-10A0A0G2JGN0 119 aa8.64□□□□□ -1.03
Msh6-201ENSMUST00000005503 SptssbQ925E8 76 aa8.64□□□□□ -1.03
Msh6-201ENSMUST00000005503 4930519P11RikQ9CUJ8 166 aa8.64□□□□□ -1.03
Msh6-201ENSMUST00000005503 Tex15F8VPN2 2785 aa8.64□□□□□ -1.03
Msh6-201ENSMUST00000005503 Gm10267M0QWD8 85 aa8.63□□□□□ -1.03
Msh6-201ENSMUST00000005503 Ighv8-13A0A075B5Y0 101 aa8.63□□□□□ -1.03
Msh6-201ENSMUST00000005503 A0A286YE49 62 aa8.63□□□□□ -1.03
Msh6-201ENSMUST00000005503 2310034G01RikA0A286YDL3 209 aa8.62□□□□□ -1.03
Msh6-201ENSMUST00000005503 A530084C06RikQ3UTW2 186 aa8.62□□□□□ -1.03
Msh6-201ENSMUST00000005503 Gm16485Q8C4B7 115 aa8.61□□□□□ -1.03
Msh6-201ENSMUST00000005503 1700074P13RikQ9D9G7 251 aa8.61□□□□□ -1.03
Msh6-201ENSMUST00000005503 Ighv2-5A0A0A6YY69 116 aa8.61□□□□□ -1.03
Msh6-201ENSMUST00000005503 Krtap24-1G3X9A2 248 aa8.61□□□□□ -1.03
Msh6-201ENSMUST00000005503 Gm10308Q9CVR5 141 aa8.6□□□□□ -1.03
Msh6-201ENSMUST00000005503 Gm10770F7D043 238 aa8.6□□□□□ -1.03
Msh6-201ENSMUST00000005503 H2al1bA0A087WP11 105 aa8.59□□□□□ -1.03
Msh6-201ENSMUST00000005503 Mast4Q811L6 2618 aa8.59□□□□□ -1.03
Msh6-201ENSMUST00000005503 Gm3233E9Q2H5 230 aa8.59□□□□□ -1.03
Msh6-201ENSMUST00000005503 Coa6Q8BGD8 79 aa8.59□□□□□ -1.03
Msh6-201ENSMUST00000005503 Fam229bQ8CF36 80 aa8.59□□□□□ -1.03
Msh6-201ENSMUST00000005503 SycnQ8VCK7 134 aa8.58□□□□□ -1.04
Msh6-201ENSMUST00000005503 Nf1Q04690 2841 aa8.58□□□□□ -1.04
Msh6-201ENSMUST00000005503 Krtap11-1E9Q2E9 183 aa8.58□□□□□ -1.04
Msh6-201ENSMUST00000005503 Gm10197F6QEY5 67 aa8.58□□□□□ -1.04
Msh6-201ENSMUST00000005503 Reg3aO09037 175 aa8.57□□□□□ -1.04
Msh6-201ENSMUST00000005503 Cox6a2P43023 97 aa8.57□□□□□ -1.04
Msh6-201ENSMUST00000005503 Vps13cQ8BX70 3748 aa8.57□□□□□ -1.04
Msh6-201ENSMUST00000005503 PscaP57096 123 aa8.57□□□□□ -1.04
Msh6-201ENSMUST00000005503 C530025M09RikF6RGA8 229 aa8.56□□□□□ -1.04
Msh6-201ENSMUST00000005503 Wfdc10Q3V2J9 124 aa8.56□□□□□ -1.04
Msh6-201ENSMUST00000005503 Mrpl34Q99N91 92 aa8.56□□□□□ -1.04
Msh6-201ENSMUST00000005503 Gm44790A0A0N4SV91 103 aa8.55□□□□□ -1.04
Msh6-201ENSMUST00000005503 Sox16Q62247 57 aa8.55□□□□□ -1.04
Msh6-201ENSMUST00000005503 Gm5617Q91VN2 117 aa8.55□□□□□ -1.04
Msh6-201ENSMUST00000005503 Ndufs5Q99LY9 106 aa8.55□□□□□ -1.04
Msh6-201ENSMUST00000005503 Spint4Q9D263 159 aa8.55□□□□□ -1.04
Msh6-201ENSMUST00000005503 Tep1P97499 2629 aa8.55□□□□□ -1.04
Msh6-201ENSMUST00000005503 C130032M10RikQ8C888 123 aa8.54□□□□□ -1.04
Msh6-201ENSMUST00000005503 Elof1P60003 83 aa8.54□□□□□ -1.04
Msh6-201ENSMUST00000005503 1700018G05RikA0A1B0GSI2 66 aa8.54□□□□□ -1.04
Msh6-201ENSMUST00000005503 Zfhx4Q9JJN2 3550 aa8.53□□□□□ -1.04
Msh6-201ENSMUST00000005503 Smg1Q8BKX6 3658 aaKnown RBP8.53□□□□□ -1.04
Msh6-201ENSMUST00000005503 Defb13Q8R2I4 64 aa8.52□□□□□ -1.04
Msh6-201ENSMUST00000005503 Ighv2-2A0A075B5P8 116 aa8.52□□□□□ -1.05
Msh6-201ENSMUST00000005503 P01821 116 aa8.52□□□□□ -1.05
Msh6-201ENSMUST00000005503 H2al1aQ5M8Q2 105 aa8.52□□□□□ -1.05
Msh6-201ENSMUST00000005503 Cystm1Q8K353 104 aa8.52□□□□□ -1.05
Msh6-201ENSMUST00000005503 Igkv8-28A0A0G2JE47 121 aa8.52□□□□□ -1.05
Msh6-201ENSMUST00000005503 Snhg11Q4G0K9 87 aa8.52□□□□□ -1.05
Msh6-201ENSMUST00000005503 AY074887Q8R5F9 132 aa8.51□□□□□ -1.05
Msh6-201ENSMUST00000005503 LrbaQ9ESE1 2856 aa8.51□□□□□ -1.05
Msh6-201ENSMUST00000005503 Gm21886J3QJU9 214 aa8.51□□□□□ -1.05
Msh6-201ENSMUST00000005503 H2al1eQ810S6 105 aa8.51□□□□□ -1.05
Msh6-201ENSMUST00000005503 Nbeal2Q6ZQA0 2742 aa8.51□□□□□ -1.05
Msh6-201ENSMUST00000005503 Igkv3-4A0A140T8Q4 119 aa8.5□□□□□ -1.05
Msh6-201ENSMUST00000005503 A330070K13RikQ8CA53 115 aa8.49□□□□□ -1.05
Msh6-201ENSMUST00000005503 Gm28230A0A0A0MQ91 144 aa8.49□□□□□ -1.05
Msh6-201ENSMUST00000005503 E130208F15RikQ3UPV3 143 aa8.48□□□□□ -1.05
Msh6-201ENSMUST00000005503 Col6a5A6H584 2640 aa8.48□□□□□ -1.05
Msh6-201ENSMUST00000005503 Sprr1bQ62267 153 aa8.48□□□□□ -1.05
Msh6-201ENSMUST00000005503 Igkv3-12A0A140T8P0 119 aa8.47□□□□□ -1.05
Msh6-201ENSMUST00000005503 Nupr2Q497P3 102 aa8.47□□□□□ -1.05
Msh6-201ENSMUST00000005503 Gm10320E9PW43 113 aa8.46□□□□□ -1.05
Msh6-201ENSMUST00000005503 Igkv3-3A0A140T8Q0 119 aa8.45□□□□□ -1.06
Msh6-201ENSMUST00000005503 U90926O08546 118 aa8.45□□□□□ -1.06
Msh6-201ENSMUST00000005503 Fam168bQ80XQ8 194 aa8.45□□□□□ -1.06
Msh6-201ENSMUST00000005503 Gm20604F8WIA3 75 aa8.44□□□□□ -1.06
Msh6-201ENSMUST00000005503 Hivep1Q03172 2688 aa8.44□□□□□ -1.06
Msh6-201ENSMUST00000005503 Igkv8-19A0A0G2JFN8 121 aa8.43□□□□□ -1.06
Msh6-201ENSMUST00000005503 Psors1c2Q80ZC9 134 aa8.43□□□□□ -1.06
Msh6-201ENSMUST00000005503 Dmac1Q9CQ00 111 aa8.42□□□□□ -1.06
Msh6-201ENSMUST00000005503 Zfhx3Q61329 3726 aa8.42□□□□□ -1.06
Msh6-201ENSMUST00000005503 Sprr4Q8CGN8 76 aa8.41□□□□□ -1.06
Msh6-201ENSMUST00000005503 Igkv3-7A0A0G2JE31 119 aa8.41□□□□□ -1.06
Msh6-201ENSMUST00000005503 Rpl37aP61514 92 aa8.4□□□□□ -1.06
Msh6-201ENSMUST00000005503 Pkd1l1Q8R526 2615 aa8.4□□□□□ -1.06
Msh6-201ENSMUST00000005503 Helz2E9QAM5 2947 aaKnown RBP8.4□□□□□ -1.07
Msh6-201ENSMUST00000005503 Wfdc6bF6ULY1 148 aa8.4□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 67 ms