RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Akap13E9Q394 2776 aa6.75□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Serp1Q9Z1W5 66 aa6.75□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Ighv8-11A0A075B5X4 119 aa6.74□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Igkv4-54A0A0G2JES9 117 aa6.74□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Rps28P62858 69 aaKnown RBP6.74□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 4930535I16RikQ9CUI2 172 aa6.74□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 P01819 144 aa6.73□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Gm21748Q3UE70 102 aa6.73□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Morn5Q9DAI9 170 aa6.73□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 TeppQ6IMH0 216 aa6.73□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Zc2hc1bQ9D534 172 aa6.73□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Trav4-3A0A0B4J1K1 110 aa6.73□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Gm16381A0A1Y7VKT9 73 aa6.73□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Plac8l1Q08EJ0 177 aa6.73□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Igkv3-9A0A140T8P4 119 aa6.73□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Tm2d2Q8R0I4 213 aa6.73□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 SptssbQ925E8 76 aa6.73□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Ifitm6A0A1B0GS75 124 aa6.72□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Gm5153P01627 120 aa6.72□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 CrygaP04345 174 aa6.72□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Ly6gP35461 111 aa6.72□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Trav13-4-dv7A0A075B6C2 110 aa6.71□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Trav13n-1A0A0G2JEU8 110 aa6.71□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Defb45Q3V490 66 aa6.71□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Bean1Q9EQG5 255 aa6.71□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 P01823 113 aa6.7□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Ighv1-62-1A0A075B5U3 116 aa6.7□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Trav13d-4A0A0G2JFX3 110 aa6.7□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Ccdc179J3QM76 67 aa6.7□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Gm43218A0A0G2JGT0 114 aa6.7□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Klk9Q32M27 251 aa6.7□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 EnhoQ8K1D8 76 aa6.7□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 A530084C06RikQ3UTW2 186 aa6.69□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 4930546C10RikE9Q4Y3 121 aa6.69□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Glrp1E9Q9S8 174 aa6.69□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 ScxQ64124 207 aa6.69□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Spint4Q9D263 159 aa6.69□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Gm11213A0A1B0GR83 88 aa6.69□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Tmem223Q9CQE2 199 aaKnown RBP6.69□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Klk11Q9QYN3 276 aa6.69□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Igkv8-34A0A0G2JDU0 121 aa6.68□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Trav9d-4A0A0G2JG37 103 aa6.68□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Gm10772F7AIG4 85 aa6.68□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Gm9936Q8C864 160 aa6.68□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 SelenowP63300 88 aa6.68□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 1700010B08RikQ9DAI7 102 aa6.68□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 PtprqP0C5E4 2300 aa6.68□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Igkv3-1A0A075B5P1 119 aa6.68□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Trbv13-2A0A140T8N6 113 aa6.68□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Prh1P05142 261 aa6.68□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Igkv1-35A0A0G2JDE5 120 aa6.67□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Gm4861Q8C5A4 106 aa6.67□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Igkv4-61A0A0G2JH00 117 aa6.66□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Smr3aQ61900 147 aa6.66□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Nsd1O88491 2588 aaKnown RBP6.66□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 4930556J24RikQ9D4U7 146 aa6.66□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Igkv4-58A0A0G2JGI6 119 aa6.65□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 MobpQ9D2P8 170 aa6.65□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Odf3l2Q3TZ65 277 aa6.65□□□□□ -1.34
Sh3rf1-202ENSMUST00000209611 Tfpi2O35536 230 aa6.64□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Gm10135F6TEE5 83 aa6.64□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Stab1Q8R4Y4 2571 aa6.63□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Trav9n-4A0A075B631 113 aa6.63□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Krtap16-1A2A5X5 502 aa6.63□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Ndufa12Q7TMF3 145 aaKnown RBP6.63□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Itpr2Q9Z329 2701 aa6.63□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Lst1O08843 95 aa6.62□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Spata3Q9D9T6 193 aa6.62□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Fgf23Q9EPC2 251 aa6.62□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 B230359F08RikA0A0B4J1K3 109 aa6.62□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Igkv8-24A0A140T8P5 121 aa6.62□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Atox1O08997 68 aaKnown RBP6.61□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Ighv8-13A0A075B5Y0 101 aa6.61□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Igfn1Q3KNY0 2849 aa6.6□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Sfta2E9PXB6 77 aa6.6□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Psors1c2Q80ZC9 134 aa6.6□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Zfand2aQ9JII7 171 aa6.6□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 9530053A07RikE9PVG8 2581 aa6.6□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Wfdc6bF6ULY1 148 aa6.6□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 1700011M02RikB1AX35 88 aa6.6□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 P01755 137 aa6.6□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Igkv2-109A0A075B5K6 120 aa6.59□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Ube2bP63147 152 aa6.59□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Wfdc17Q5SSJ1 76 aa6.59□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 PolqQ8CGS6 2544 aa6.59□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Gm7138L7N2C3 230 aa6.59□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Reg3bP35230 175 aa6.59□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Gm3238W4VSP7 230 aa6.59□□□□□ -1.35
Sh3rf1-202ENSMUST00000209611 Gm10577Q3UDV9 132 aa6.58□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Acyp1P56376 99 aa6.58□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Ighv2-9-1A0A075B697 116 aa6.58□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 5730596B20RikQ8BQ08 205 aa6.58□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Ormdl1Q921I0 153 aa6.58□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Ly6hQ9WUC3 139 aa6.57□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Gm4707V9GXN5 68 aa6.57□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Trav13n-2A0A0G2JF93 110 aa6.57□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Igkv8-16A0A0G2JDG9 121 aa6.56□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Reg3aO09037 175 aa6.56□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Gm10197F6QEY5 67 aa6.56□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Trav13-1A0A075B644 110 aa6.56□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 89.8 ms