RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Zfand2aQ9JII7 171 aa9.1□□□□□ -0.95
Gm28043-201ENSMUST00000130871 Crip3Q6Q6R3 243 aa9.09□□□□□ -0.95
Gm28043-201ENSMUST00000130871 BC025920Q3US60 128 aa9.09□□□□□ -0.95
Gm28043-201ENSMUST00000130871 Smr3aQ61900 147 aa9.09□□□□□ -0.95
Gm28043-201ENSMUST00000130871 Usp9yF8VPU6 2556 aa9.08□□□□□ -0.96
Gm28043-201ENSMUST00000130871 Defb10Q8R2I8 73 aa9.07□□□□□ -0.96
Gm28043-201ENSMUST00000130871 Kiaa1549Q68FD9 1940 aa9.06□□□□□ -0.96
Gm28043-201ENSMUST00000130871 1600014C23RikQ9DAX4 101 aa9.06□□□□□ -0.96
Gm28043-201ENSMUST00000130871 Wfdc17Q5SSJ1 76 aa9.06□□□□□ -0.96
Gm28043-201ENSMUST00000130871 Gm10300Q8C8P7 189 aa9.05□□□□□ -0.96
Gm28043-201ENSMUST00000130871 Q9DAA7 145 aa9.05□□□□□ -0.96
Gm28043-201ENSMUST00000130871 Pcsk5Q04592 1877 aa9.05□□□□□ -0.96
Gm28043-201ENSMUST00000130871 Ntn5Q3UQ22 452 aa9.04□□□□□ -0.96
Gm28043-201ENSMUST00000130871 3110070M22RikQ9DAQ7 118 aa9.04□□□□□ -0.96
Gm28043-201ENSMUST00000130871 Myo18bE9PV66 2605 aa9.04□□□□□ -0.96
Gm28043-201ENSMUST00000130871 SrcapA0A087WQ44 3271 aa9.03□□□□□ -0.96
Gm28043-201ENSMUST00000130871 SnurfQ9WU12 71 aa9.03□□□□□ -0.96
Gm28043-201ENSMUST00000130871 Znf580Q9DB38 172 aa9.02□□□□□ -0.96
Gm28043-201ENSMUST00000130871 Epg5Q80TA9 2572 aa9.02□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Gm28230A0A0A0MQ91 144 aa9.02□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Cd164Q9R0L9 197 aa9.01□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Ighv1-56A0A0A6YXG2 117 aa9□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Gm9573F7C950 1606 aa8.99□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Coa6Q8BGD8 79 aa8.99□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Cdip1Q9DB75 208 aa8.99□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Igkv8-19A0A0G2JFN8 121 aa8.98□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Unc79Q0KK59 2596 aa8.98□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Lrp4Q8VI56 1905 aa8.97□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Reg3aO09037 175 aa8.97□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Gm43218A0A0G2JGT0 114 aa8.97□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Gm10570F6VB42 170 aa8.97□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Gm3285A0A1W2P7U0 201 aa8.96□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Defb39Q70KL3 74 aa8.96□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Gm28374F6SG70 93 aa8.96□□□□□ -0.97
Gm28043-201ENSMUST00000130871 Col4a4Q9QZR9 1682 aa8.95□□□□□ -0.98
Gm28043-201ENSMUST00000130871 Abca12E9Q876 2595 aa8.94□□□□□ -0.98
Gm28043-201ENSMUST00000130871 4930519P11RikQ9CUJ8 166 aa8.94□□□□□ -0.98
Gm28043-201ENSMUST00000130871 Bean1Q9EQG5 255 aa8.94□□□□□ -0.98
Gm28043-201ENSMUST00000130871 Cox6a2P43023 97 aa8.93□□□□□ -0.98
Gm28043-201ENSMUST00000130871 Srsf12Q8C8K3 266 aa8.93□□□□□ -0.98
Gm28043-201ENSMUST00000130871 Defb37Q7TMD2 62 aa8.93□□□□□ -0.98
Gm28043-201ENSMUST00000130871 Ankrd11E9Q4F7 2643 aa8.92□□□□□ -0.98
Gm28043-201ENSMUST00000130871 A730009L09RikA0A1B0GS82 72 aa8.92□□□□□ -0.98
Gm28043-201ENSMUST00000130871 CrygaP04345 174 aa8.91□□□□□ -0.98
Gm28043-201ENSMUST00000130871 Mrpl34Q99N91 92 aa8.91□□□□□ -0.98
Gm28043-201ENSMUST00000130871 Ighv2-5A0A0A6YY69 116 aa8.91□□□□□ -0.98
Gm28043-201ENSMUST00000130871 Chchd10Q7TNL9 138 aa8.91□□□□□ -0.98
Gm28043-201ENSMUST00000130871 Defb45Q3V490 66 aa8.9□□□□□ -0.98
Gm28043-201ENSMUST00000130871 P01819 144 aa8.9□□□□□ -0.98
Gm28043-201ENSMUST00000130871 MobpQ9D2P8 170 aa8.9□□□□□ -0.99
Gm28043-201ENSMUST00000130871 Gm16181B0V2H2 73 aa8.89□□□□□ -0.99
Gm28043-201ENSMUST00000130871 Gm10197F6QEY5 67 aa8.89□□□□□ -0.99
Gm28043-201ENSMUST00000130871 4930518I15RikQ3V2W7 57 aa8.89□□□□□ -0.99
Gm28043-201ENSMUST00000130871 Spint4Q9D263 159 aa8.88□□□□□ -0.99
Gm28043-201ENSMUST00000130871 Gm10160F6Y577 67 aa8.88□□□□□ -0.99
Gm28043-201ENSMUST00000130871 Msrb1Q9JLC3 116 aa8.88□□□□□ -0.99
Gm28043-201ENSMUST00000130871 CicQ924A2 2510 aa8.88□□□□□ -0.99
Gm28043-201ENSMUST00000130871 Gm21886J3QJU9 214 aa8.87□□□□□ -0.99
Gm28043-201ENSMUST00000130871 Fam19a3Q7TPG6 132 aa8.87□□□□□ -0.99
Gm28043-201ENSMUST00000130871 1700018G05RikA0A1B0GSI2 66 aa8.86□□□□□ -0.99
Gm28043-201ENSMUST00000130871 Gm11627A6PWP4 55 aa8.86□□□□□ -0.99
Gm28043-201ENSMUST00000130871 Sostdc1Q9CQN4 206 aa8.86□□□□□ -0.99
Gm28043-201ENSMUST00000130871 Csdc2Q91YQ3 154 aa8.86□□□□□ -0.99
Gm28043-201ENSMUST00000130871 Hcfc1Q61191 2045 aaKnown RBP8.85□□□□□ -0.99
Gm28043-201ENSMUST00000130871 Ighv2-2A0A075B5P8 116 aa8.85□□□□□ -0.99
Gm28043-201ENSMUST00000130871 P01821 116 aa8.85□□□□□ -0.99
Gm28043-201ENSMUST00000130871 FasnP19096 2504 aaKnown RBP8.84□□□□□ -0.99
Gm28043-201ENSMUST00000130871 6430550D23RikE9Q1X6 194 aa8.84□□□□□ -0.99
Gm28043-201ENSMUST00000130871 Nbeal1E9PYP2 2688 aa8.84□□□□□ -0.99
Gm28043-201ENSMUST00000130871 2310034G01RikA0A286YDL3 209 aa8.83□□□□□ -1
Gm28043-201ENSMUST00000130871 Gm17606F6ZL36 78 aa8.83□□□□□ -1
Gm28043-201ENSMUST00000130871 Gm10642Q3TWM1 71 aa8.83□□□□□ -1
Gm28043-201ENSMUST00000130871 Dmac1Q9CQ00 111 aa8.83□□□□□ -1
Gm28043-201ENSMUST00000130871 Gm26661M0QWV4 156 aa8.82□□□□□ -1
Gm28043-201ENSMUST00000130871 Igkv8-27A0A0G2JF28 120 aa8.81□□□□□ -1
Gm28043-201ENSMUST00000130871 E130208F15RikQ3UPV3 143 aa8.81□□□□□ -1
Gm28043-201ENSMUST00000130871 Col27a1Q5QNQ9 1845 aa8.81□□□□□ -1
Gm28043-201ENSMUST00000130871 Elof1P60003 83 aa8.8□□□□□ -1
Gm28043-201ENSMUST00000130871 Gm9903Q8C9Y8 129 aa8.8□□□□□ -1
Gm28043-201ENSMUST00000130871 Gm44790A0A0N4SV91 103 aa8.79□□□□□ -1
Gm28043-201ENSMUST00000130871 Krtap16-1A2A5X5 502 aa8.79□□□□□ -1
Gm28043-201ENSMUST00000130871 Defb50Q6TU36 73 aa8.78□□□□□ -1
Gm28043-201ENSMUST00000130871 AI606181Q8C7B9 129 aa8.78□□□□□ -1
Gm28043-201ENSMUST00000130871 AI854703Q8BIN3 203 aa8.77□□□□□ -1.01
Gm28043-201ENSMUST00000130871 Cep192E9Q4Y4 2514 aaKnown RBP8.76□□□□□ -1.01
Gm28043-201ENSMUST00000130871 Rps28P62858 69 aaKnown RBP8.76□□□□□ -1.01
Gm28043-201ENSMUST00000130871 Krtap24-1G3X9A2 248 aa8.75□□□□□ -1.01
Gm28043-201ENSMUST00000130871 Limd2Q8BGB5 128 aa8.75□□□□□ -1.01
Gm28043-201ENSMUST00000130871 Psors1c2Q80ZC9 134 aa8.74□□□□□ -1.01
Gm28043-201ENSMUST00000130871 FlnbQ80X90 2602 aaKnown RBP8.74□□□□□ -1.01
Gm28043-201ENSMUST00000130871 A530084C06RikQ3UTW2 186 aa8.74□□□□□ -1.01
Gm28043-201ENSMUST00000130871 Gm10999F6Q4M4 69 aa8.74□□□□□ -1.01
Gm28043-201ENSMUST00000130871 Znf414Q9DCK4 299 aa8.74□□□□□ -1.01
Gm28043-201ENSMUST00000130871 Gm12216A0A1W2P827 62 aa8.74□□□□□ -1.01
Gm28043-201ENSMUST00000130871 Snhg11Q4G0K9 87 aa8.73□□□□□ -1.01
Gm28043-201ENSMUST00000130871 A930002H24RikQ8C8Y3 163 aa8.73□□□□□ -1.01
Gm28043-201ENSMUST00000130871 Krtap26-1Q9D7N2 215 aa8.72□□□□□ -1.01
Gm28043-201ENSMUST00000130871 Gm10770F7D043 238 aa8.72□□□□□ -1.01
Gm28043-201ENSMUST00000130871 Defb11Q8R2I7 77 aa8.72□□□□□ -1.01
Gm28043-201ENSMUST00000130871 Col4a2P08122 1707 aa8.71□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms