RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Snhg11Q4G0K9 87 aa8.34□□□□□ -1.07
Ddx55-202ENSMUST00000111438 PlecQ9QXS1 4691 aaKnown RBP8.34□□□□□ -1.07
Ddx55-202ENSMUST00000111438 Gm11020F6ZGD5 61 aa8.34□□□□□ -1.07
Ddx55-202ENSMUST00000111438 7530416G11RikJ3QJX6 159 aa8.34□□□□□ -1.07
Ddx55-202ENSMUST00000111438 Ighv2-6-8A0A0A6YWY9 116 aa8.33□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Odf3l2Q3TZ65 277 aa8.33□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Glrp1E9Q9S8 174 aa8.33□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Cfap126Q6P8X9 189 aa8.33□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Stab2Q8R4U0 2559 aa8.33□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Zfp951A0A087WRH0 451 aa8.32□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Ighv1-72P01751 139 aa8.32□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Cdc42se2Q8BGH7 84 aa8.32□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Tm2d2Q8R0I4 213 aa8.32□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Tomm7Q9D173 55 aa8.32□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Gm9918Q8BUR5 174 aa8.31□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Igkv1-99F6XWB2 120 aa8.3□□□□□ -1.08
Ddx55-202ENSMUST00000111438 MobpQ9D2P8 170 aa8.3□□□□□ -1.08
Ddx55-202ENSMUST00000111438 3110070M22RikQ9DAQ7 118 aa8.3□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Igkv4-79A0A075B5L8 119 aa8.3□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Rps28P62858 69 aaKnown RBP8.3□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Defa21Q8C1P2 93 aa8.3□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Samd13D3YUG0 102 aa8.29□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Defa7P50705 93 aa8.29□□□□□ -1.08
Ddx55-202ENSMUST00000111438 E130208F15RikQ3UPV3 143 aa8.29□□□□□ -1.08
Ddx55-202ENSMUST00000111438 2310061N02RikQ9D6S9 174 aa8.28□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Igkv3-9A0A140T8P4 119 aa8.28□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Gm9507D3Z5T3 223 aa8.28□□□□□ -1.08
Ddx55-202ENSMUST00000111438 Tfpi2O35536 230 aa8.28□□□□□ -1.08
Ddx55-202ENSMUST00000111438 4930442H23RikQ9D5G7 103 aa8.27□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Ly6hQ9WUC3 139 aa8.27□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Phpt1Q9DAK9 124 aa8.27□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Znf414Q9DCK4 299 aa8.27□□□□□ -1.09
Ddx55-202ENSMUST00000111438 PemtQ61907 199 aa8.26□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Cystm1Q8K353 104 aa8.26□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Fam19a5Q91WE9 132 aa8.26□□□□□ -1.09
Ddx55-202ENSMUST00000111438 9430069I07RikQ9CX21 111 aa8.26□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Naa38Q9D2U5 125 aa8.26□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Reg3bP35230 175 aa8.26□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Hist1h4aP62806 103 aaKnown RBP8.26□□□□□ -1.09
Ddx55-202ENSMUST00000111438 5730596B20RikQ8BQ08 205 aa8.25□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Trav11A0A0B4J1J9 114 aa8.25□□□□□ -1.09
Ddx55-202ENSMUST00000111438 4930546C10RikE9Q4Y3 121 aa8.25□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Fgf23Q9EPC2 251 aa8.25□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Dnah7aE9Q0T8 4024 aa8.25□□□□□ -1.09
Ddx55-202ENSMUST00000111438 9430015G10RikA2ASP7 199 aa8.23□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Rpl18aP62717 176 aaKnown RBP8.23□□□□□ -1.09
Ddx55-202ENSMUST00000111438 EnhoQ8K1D8 76 aa8.23□□□□□ -1.09
Ddx55-202ENSMUST00000111438 4930519P11RikQ9CUJ8 166 aa8.23□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Tmem258P61166 79 aa8.22□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Timm17bQ9Z0V7 172 aa8.22□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Igkv3-1A0A075B5P1 119 aa8.22□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Gm10542F6XDR3 90 aa8.22□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Tmem243B2RVB9 118 aa8.21□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Xcl1P47993 114 aa8.21□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Prelid3aQ8VE85 172 aa8.21□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Tmem223Q9CQE2 199 aaKnown RBP8.21□□□□□ -1.09
Ddx55-202ENSMUST00000111438 Trav4-3A0A0B4J1K1 110 aa8.2□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Igkv6-13A0A0G2JGY3 119 aa8.2□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Prp2P05143 317 aa8.2□□□□□ -1.1
Ddx55-202ENSMUST00000111438 4930544G11RikQ9CR99 193 aa8.2□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Sostdc1Q9CQN4 206 aa8.2□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Gm7102J3QQ10 178 aa8.19□□□□□ -1.1
Ddx55-202ENSMUST00000111438 MifP34884 115 aaKnown RBP8.19□□□□□ -1.1
Ddx55-202ENSMUST00000111438 H2al1aQ5M8Q2 105 aa8.19□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Serp2Q6TAW2 65 aa8.19□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Krtap11-1E9Q2E9 183 aa8.19□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Sprr1bQ62267 153 aa8.19□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Gm19935A0A1B0GSF9 52 aa8.18□□□□□ -1.1
Ddx55-202ENSMUST00000111438 P01823 113 aa8.18□□□□□ -1.1
Ddx55-202ENSMUST00000111438 OxtP35454 125 aa8.18□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Gm11213A0A1B0GR83 88 aa8.18□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Ighv2-9-1A0A075B697 116 aa8.17□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Brk1Q91VR8 75 aa8.17□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Prh1P05142 261 aa8.17□□□□□ -1.1
Ddx55-202ENSMUST00000111438 SelenowP63300 88 aa8.17□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Dnah7cA0A087WR13 4024 aa8.17□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Ly6g6cQ9Z1Q4 126 aa8.16□□□□□ -1.1
Ddx55-202ENSMUST00000111438 2310050C09RikG5E8Z3 280 aa8.16□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Dnal4Q9DCM4 105 aa8.16□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Igkv1-35A0A0G2JDE5 120 aa8.15□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Defa23Q5G866 93 aa8.15□□□□□ -1.1
Ddx55-202ENSMUST00000111438 Gm5617Q91VN2 117 aa8.15□□□□□ -1.11
Ddx55-202ENSMUST00000111438 1700010B08RikQ9DAI7 102 aa8.14□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Dnah9B1AR51 4484 aa8.14□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Dnah11E9Q7N9 4488 aa8.14□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Trav9n-4A0A075B631 113 aa8.14□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Gm16485Q8C4B7 115 aa8.14□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Trav13-4-dv7A0A075B6C2 110 aa8.13□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Lst1O08843 95 aa8.13□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Ighv1-61P01749 117 aa8.13□□□□□ -1.11
Ddx55-202ENSMUST00000111438 4930524J08RikQ9CUJ5 163 aa8.13□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Ighv13-2A0A0A6YWN3 119 aa8.13□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Trav13d-4A0A0G2JFX3 110 aa8.13□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Smim26Q3V460 107 aa8.13□□□□□ -1.11
Ddx55-202ENSMUST00000111438 BaalcQ8VHV1 145 aa8.13□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Ighv1-62-1A0A075B5U3 116 aa8.12□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Rpl28P41105 137 aaKnown RBP8.12□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Hbb-b2P02089 147 aa8.11□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Mrpl55Q9CZ83 127 aa8.11□□□□□ -1.11
Ddx55-202ENSMUST00000111438 Zfand2aQ9JII7 171 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 77 ms