RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Gm10845Q3UNY9 185 aa7.74□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Wfdc17Q5SSJ1 76 aa7.73□□□□□ -1.17
Scn8a-203ENSMUST00000108908 9230102O04RikA2ASX7 82 aa7.73□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Zfand2aQ9JII7 171 aa7.73□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Pou2af1Q64693 256 aa7.73□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Gm9887F6RFI0 207 aa7.72□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Cd164Q9R0L9 197 aa7.72□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Ndufb1P0DN34 57 aa7.71□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Gm10549Q3URY4 149 aa7.71□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Krtap24-1G3X9A2 248 aa7.7□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Q9DAA7 145 aa7.7□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Defb37Q7TMD2 62 aa7.7□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Hivep2Q3UHF7 2430 aa7.7□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Crip3Q6Q6R3 243 aa7.7□□□□□ -1.18
Scn8a-203ENSMUST00000108908 H2al1mQ9DAD9 105 aa7.69□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Sox16Q62247 57 aa7.68□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Serp1Q9Z1W5 66 aa7.68□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Gm28230A0A0A0MQ91 144 aa7.68□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Hivep3A2A884 2348 aa7.68□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Igkv8-19A0A0G2JFN8 121 aa7.68□□□□□ -1.18
Scn8a-203ENSMUST00000108908 3110070M22RikQ9DAQ7 118 aa7.67□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Ankhd1E9PUR0 2548 aaKnown RBP7.67□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Psmb11Q8BG41 302 aa7.67□□□□□ -1.18
Scn8a-203ENSMUST00000108908 UqcrqQ9CQ69 82 aa7.67□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Gm43218A0A0G2JGT0 114 aa7.67□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Usp34Q6ZQ93 3582 aa7.66□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Ighv1-56A0A0A6YXG2 117 aa7.66□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Gm10642Q3TWM1 71 aa7.66□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Defb11Q8R2I7 77 aa7.66□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Snhg11Q4G0K9 87 aa7.65□□□□□ -1.18
Scn8a-203ENSMUST00000108908 Gm16181B0V2H2 73 aa7.65□□□□□ -1.18
Scn8a-203ENSMUST00000108908 CrygaP04345 174 aa7.65□□□□□ -1.19
Scn8a-203ENSMUST00000108908 E130208F15RikQ3UPV3 143 aa7.64□□□□□ -1.19
Scn8a-203ENSMUST00000108908 Ttc28Q80XJ3 2450 aa7.63□□□□□ -1.19
Scn8a-203ENSMUST00000108908 Reg3aO09037 175 aa7.63□□□□□ -1.19
Scn8a-203ENSMUST00000108908 4930519P11RikQ9CUJ8 166 aa7.62□□□□□ -1.19
Scn8a-203ENSMUST00000108908 Gm10570F6VB42 170 aa7.62□□□□□ -1.19
Scn8a-203ENSMUST00000108908 Cox6a2P43023 97 aa7.62□□□□□ -1.19
Scn8a-203ENSMUST00000108908 Mrpl34Q99N91 92 aa7.62□□□□□ -1.19
Scn8a-203ENSMUST00000108908 1700018G05RikA0A1B0GSI2 66 aa7.62□□□□□ -1.19
Scn8a-203ENSMUST00000108908 Msrb1Q9JLC3 116 aa7.6□□□□□ -1.19
Scn8a-203ENSMUST00000108908 Gm19935A0A1B0GSF9 52 aa7.6□□□□□ -1.19
Scn8a-203ENSMUST00000108908 Defb45Q3V490 66 aa7.6□□□□□ -1.19
Scn8a-203ENSMUST00000108908 MobpQ9D2P8 170 aa7.6□□□□□ -1.19
Scn8a-203ENSMUST00000108908 Dmbt1Q60997 2085 aa7.59□□□□□ -1.19
Scn8a-203ENSMUST00000108908 Phf5aP83870 110 aaKnown RBP7.59□□□□□ -1.19
Scn8a-203ENSMUST00000108908 Sostdc1Q9CQN4 206 aa7.58□□□□□ -1.2
Scn8a-203ENSMUST00000108908 SnurfQ9WU12 71 aa7.58□□□□□ -1.2
Scn8a-203ENSMUST00000108908 Dmac1Q9CQ00 111 aa7.58□□□□□ -1.2
Scn8a-203ENSMUST00000108908 SetxA2AKX3 2646 aa7.57□□□□□ -1.2
Scn8a-203ENSMUST00000108908 Gm11627A6PWP4 55 aa7.56□□□□□ -1.2
Scn8a-203ENSMUST00000108908 CenpfE9Q3P4 2997 aaKnown RBP7.56□□□□□ -1.2
Scn8a-203ENSMUST00000108908 Chchd10Q7TNL9 138 aa7.55□□□□□ -1.2
Scn8a-203ENSMUST00000108908 Cdip1Q9DB75 208 aa7.55□□□□□ -1.2
Scn8a-203ENSMUST00000108908 H2al1kJ3QP08 105 aa7.55□□□□□ -1.2
Scn8a-203ENSMUST00000108908 Spata3Q9D9T6 193 aa7.55□□□□□ -1.2
Scn8a-203ENSMUST00000108908 AI606181Q8C7B9 129 aa7.54□□□□□ -1.2
Scn8a-203ENSMUST00000108908 Gm10772F7AIG4 85 aa7.54□□□□□ -1.2
Scn8a-203ENSMUST00000108908 Smr3aQ61900 147 aa7.54□□□□□ -1.2
Scn8a-203ENSMUST00000108908 PcntP48725 2898 aa7.53□□□□□ -1.2
Scn8a-203ENSMUST00000108908 2310034G01RikA0A286YDL3 209 aa7.53□□□□□ -1.2
Scn8a-203ENSMUST00000108908 6430550D23RikE9Q1X6 194 aa7.53□□□□□ -1.2
Scn8a-203ENSMUST00000108908 Igkv8-27A0A0G2JF28 120 aa7.52□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Elof1P60003 83 aa7.52□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Znf414Q9DCK4 299 aa7.52□□□□□ -1.21
Scn8a-203ENSMUST00000108908 RetnlbQ99P86 105 aa7.51□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Prune2Q52KR3 3084 aa7.51□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Gm9903Q8C9Y8 129 aa7.51□□□□□ -1.21
Scn8a-203ENSMUST00000108908 PtprqP0C5E4 2300 aa7.51□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Krtap26-1Q9D7N2 215 aa7.51□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Gm44790A0A0N4SV91 103 aa7.51□□□□□ -1.21
Scn8a-203ENSMUST00000108908 TrioQ0KL02 3102 aa7.51□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Fam168bQ80XQ8 194 aa7.5□□□□□ -1.21
Scn8a-203ENSMUST00000108908 1810062G17RikG3X8Y2 129 aa7.5□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Gm10337F7DEP7 55 aa7.5□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Csdc2Q91YQ3 154 aa7.5□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Gm26661M0QWV4 156 aa7.5□□□□□ -1.21
Scn8a-203ENSMUST00000108908 P01819 144 aa7.5□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Krtap11-1E9Q2E9 183 aa7.5□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Gm21886J3QJU9 214 aa7.49□□□□□ -1.21
Scn8a-203ENSMUST00000108908 4930518I15RikQ3V2W7 57 aa7.49□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Fam19a3Q7TPG6 132 aa7.48□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Gm3233E9Q2H5 230 aa7.48□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Gm10837Q3UTT8 145 aa7.48□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Bean1Q9EQG5 255 aa7.48□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Gm10770F7D043 238 aa7.47□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Defb50Q6TU36 73 aa7.47□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Usp9xP70398 2559 aaKnown RBP7.47□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Rpl37aP61514 92 aa7.47□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Gm5617Q91VN2 117 aa7.47□□□□□ -1.21
Scn8a-203ENSMUST00000108908 Gm10999F6Q4M4 69 aa7.46□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Spaca4Q80ZQ0 127 aa7.46□□□□□ -1.22
Scn8a-203ENSMUST00000108908 AI854703Q8BIN3 203 aa7.46□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Chd8Q09XV5 2582 aaKnown RBP7.46□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Gm17606F6ZL36 78 aa7.46□□□□□ -1.22
Scn8a-203ENSMUST00000108908 AplnQ9R0R4 77 aa7.45□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Ighv2-5A0A0A6YY69 116 aa7.45□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Gpr15lA0A0B4J1N3 78 aa7.45□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Coa6Q8BGD8 79 aa7.44□□□□□ -1.22
Scn8a-203ENSMUST00000108908 Zfp462B1AWL2 2495 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 61.8 ms