RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 Gm16223Q8CBM3 117 aa4.93□□□□□ -1.62
Scn1a-202ENSMUST00000094951 AcanQ61282 2132 aaKnown RBP4.93□□□□□ -1.62
Scn1a-202ENSMUST00000094951 Wfdc13Q5DQQ6 81 aa4.92□□□□□ -1.62
Scn1a-202ENSMUST00000094951 Wfdc12Q9JHY3 85 aa4.92□□□□□ -1.62
Scn1a-202ENSMUST00000094951 Prol1E9PYQ4 312 aa4.92□□□□□ -1.62
Scn1a-202ENSMUST00000094951 H2al1aQ5M8Q2 105 aa4.92□□□□□ -1.62
Scn1a-202ENSMUST00000094951 H2al1eQ810S6 105 aa4.92□□□□□ -1.62
Scn1a-202ENSMUST00000094951 Ifitm6A0A1B0GS75 124 aa4.91□□□□□ -1.62
Scn1a-202ENSMUST00000094951 Gm10549Q3URY4 149 aa4.91□□□□□ -1.62
Scn1a-202ENSMUST00000094951 Wfdc17Q5SSJ1 76 aa4.91□□□□□ -1.62
Scn1a-202ENSMUST00000094951 Gm10300Q8C8P7 189 aa4.91□□□□□ -1.62
Scn1a-202ENSMUST00000094951 P01819 144 aa4.91□□□□□ -1.62
Scn1a-202ENSMUST00000094951 CenpwQ3URR0 86 aa4.91□□□□□ -1.62
Scn1a-202ENSMUST00000094951 Smr3aQ61900 147 aa4.91□□□□□ -1.62
Scn1a-202ENSMUST00000094951 2310034G01RikA0A286YDL3 209 aa4.9□□□□□ -1.62
Scn1a-202ENSMUST00000094951 Gm1968Q3T9I3 115 aa4.9□□□□□ -1.62
Scn1a-202ENSMUST00000094951 MtorQ9JLN9 2549 aa4.9□□□□□ -1.62
Scn1a-202ENSMUST00000094951 Gm27235Q3UW50 83 aa4.89□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Dmac1Q9CQ00 111 aa4.89□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Csdc2Q91YQ3 154 aa4.89□□□□□ -1.63
Scn1a-202ENSMUST00000094951 AI606181Q8C7B9 129 aa4.88□□□□□ -1.63
Scn1a-202ENSMUST00000094951 SetxA2AKX3 2646 aa4.88□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Gm19935A0A1B0GSF9 52 aa4.88□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Ndufs5Q99LY9 106 aa4.88□□□□□ -1.63
Scn1a-202ENSMUST00000094951 4930524J08RikQ9CUJ5 163 aa4.87□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Ighv1-56A0A0A6YXG2 117 aa4.87□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Defb40Q70KL2 73 aa4.87□□□□□ -1.63
Scn1a-202ENSMUST00000094951 BtcQ05928 177 aa4.87□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Defb39Q70KL3 74 aa4.87□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Gm5142Q8C5X9 133 aa4.87□□□□□ -1.63
Scn1a-202ENSMUST00000094951 DysfQ9ESD7 2090 aa4.87□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Gm28230A0A0A0MQ91 144 aa4.87□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Snhg11Q4G0K9 87 aa4.87□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Hivep3A2A884 2348 aa4.87□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Gm10642Q3TWM1 71 aa4.86□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Gm10845Q3UNY9 185 aa4.86□□□□□ -1.63
Scn1a-202ENSMUST00000094951 UqcrqQ9CQ69 82 aa4.86□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Gpr15lA0A0B4J1N3 78 aa4.85□□□□□ -1.63
Scn1a-202ENSMUST00000094951 BC025920Q3US60 128 aa4.85□□□□□ -1.63
Scn1a-202ENSMUST00000094951 H2al1mQ9DAD9 105 aa4.85□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Gm10570F6VB42 170 aa4.85□□□□□ -1.63
Scn1a-202ENSMUST00000094951 4930535I16RikQ9CUI2 172 aa4.85□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Ighv2-2A0A075B5P8 116 aa4.84□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Ighv2-5A0A0A6YY69 116 aa4.84□□□□□ -1.63
Scn1a-202ENSMUST00000094951 P01821 116 aa4.84□□□□□ -1.63
Scn1a-202ENSMUST00000094951 4930432M17RikQ3V0W9 174 aa4.84□□□□□ -1.63
Scn1a-202ENSMUST00000094951 RetnlbQ99P86 105 aa4.84□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Cdip1Q9DB75 208 aa4.84□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Usp9xP70398 2559 aaKnown RBP4.84□□□□□ -1.63
Scn1a-202ENSMUST00000094951 Gm21886J3QJU9 214 aa4.84□□□□□ -1.64
Scn1a-202ENSMUST00000094951 Gm11213A0A1B0GR83 88 aa4.83□□□□□ -1.64
Scn1a-202ENSMUST00000094951 ScxQ64124 207 aa4.83□□□□□ -1.64
Scn1a-202ENSMUST00000094951 AplnQ9R0R4 77 aa4.83□□□□□ -1.64
Scn1a-202ENSMUST00000094951 Igkv8-27A0A0G2JF28 120 aa4.83□□□□□ -1.64
Scn1a-202ENSMUST00000094951 Cox6a2P43023 97 aa4.83□□□□□ -1.64
Scn1a-202ENSMUST00000094951 A730009L09RikA0A1B0GS82 72 aa4.82□□□□□ -1.64
Scn1a-202ENSMUST00000094951 Fam104aA2A6P4 185 aa4.82□□□□□ -1.64
Scn1a-202ENSMUST00000094951 Gm10337F7DEP7 55 aa4.82□□□□□ -1.64
Scn1a-202ENSMUST00000094951 Dscaml1Q4VA61 2053 aa4.81□□□□□ -1.64
Scn1a-202ENSMUST00000094951 4930507D05RikQ8C9C9 103 aa4.81□□□□□ -1.64
Scn1a-202ENSMUST00000094951 Spint4Q9D263 159 aa4.8□□□□□ -1.64
Scn1a-202ENSMUST00000094951 3110070M22RikQ9DAQ7 118 aa4.79□□□□□ -1.64
Scn1a-202ENSMUST00000094951 H2al1kJ3QP08 105 aa4.79□□□□□ -1.64
Scn1a-202ENSMUST00000094951 Epg5Q80TA9 2572 aa4.78□□□□□ -1.64
Scn1a-202ENSMUST00000094951 Q8BGJ3 129 aa4.78□□□□□ -1.64
Scn1a-202ENSMUST00000094951 Cd164Q9R0L9 197 aa4.78□□□□□ -1.64
Scn1a-202ENSMUST00000094951 Phf5aP83870 110 aaKnown RBP4.78□□□□□ -1.64
Scn1a-202ENSMUST00000094951 Gm10267M0QWD8 85 aa4.78□□□□□ -1.64
Scn1a-202ENSMUST00000094951 CnbpP53996 178 aaKnown RBP4.78□□□□□ -1.64
Scn1a-202ENSMUST00000094951 Spink13Q3UTS8 97 aa4.78□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Flg2Q2VIS4 2362 aa4.77□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Elof1P60003 83 aa4.77□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Msrb1Q9JLC3 116 aa4.77□□□□□ -1.65
Scn1a-202ENSMUST00000094951 PolqQ8CGS6 2544 aa4.77□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Gm9821Q8K076 103 aa4.77□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Nav3Q80TN7 2359 aa4.76□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Gm10135F6TEE5 83 aa4.75□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Unc79Q0KK59 2596 aa4.74□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Nav2E9Q842 2432 aa4.74□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Ankrd17Q99NH0 2603 aaKnown RBP4.74□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Defb45Q3V490 66 aa4.73□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Gm20538F6Z9R1 75 aa4.73□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Setd2E9Q5F9 2537 aa4.73□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Spaca4Q80ZQ0 127 aa4.73□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Bean1Q9EQG5 255 aa4.73□□□□□ -1.65
Scn1a-202ENSMUST00000094951 PtprqP0C5E4 2300 aa4.73□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Coa6Q8BGD8 79 aa4.72□□□□□ -1.65
Scn1a-202ENSMUST00000094951 Gm26620Q9CY65 116 aa4.71□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Sprr4Q8CGN8 76 aa4.71□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Mrpl34Q99N91 92 aa4.71□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Gm10772F7AIG4 85 aa4.71□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Defb50Q6TU36 73 aa4.71□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Gm10065F6TJM2 114 aa4.71□□□□□ -1.66
Scn1a-202ENSMUST00000094951 FlnbQ80X90 2602 aaKnown RBP4.7□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Gm3250E9Q1M3 230 aa4.7□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Limd2Q8BGB5 128 aa4.69□□□□□ -1.66
Scn1a-202ENSMUST00000094951 TroQ6DIC6 2087 aa4.69□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Rnase13Q5GAM7 153 aa4.69□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Sprr1bQ62267 153 aa4.69□□□□□ -1.66
Scn1a-202ENSMUST00000094951 Reg3aO09037 175 aa4.68□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 94.8 ms