RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Gm10509O88255 85 aa11.33□□□□□ -0.6
Ubr3-201ENSMUST00000055758 Piezo2Q8CD54 2822 aa11.33□□□□□ -0.6
Ubr3-201ENSMUST00000055758 Gm10845Q3UNY9 185 aa11.33□□□□□ -0.6
Ubr3-201ENSMUST00000055758 Defb42Q8BVB5 75 aa11.32□□□□□ -0.6
Ubr3-201ENSMUST00000055758 Coa6Q8BGD8 79 aa11.32□□□□□ -0.6
Ubr3-201ENSMUST00000055758 Gm10197F6QEY5 67 aa11.32□□□□□ -0.6
Ubr3-201ENSMUST00000055758 Reg3aO09037 175 aa11.31□□□□□ -0.6
Ubr3-201ENSMUST00000055758 Gm28230A0A0A0MQ91 144 aa11.31□□□□□ -0.6
Ubr3-201ENSMUST00000055758 Gm10160F6Y577 67 aa11.31□□□□□ -0.6
Ubr3-201ENSMUST00000055758 4930518I15RikQ3V2W7 57 aa11.31□□□□□ -0.6
Ubr3-201ENSMUST00000055758 CnfnQ6PCW6 111 aa11.3□□□□□ -0.6
Ubr3-201ENSMUST00000055758 UtrnE9Q6R7 3430 aa11.3□□□□□ -0.6
Ubr3-201ENSMUST00000055758 P01819 144 aa11.29□□□□□ -0.6
Ubr3-201ENSMUST00000055758 Shisa2Q8QZV2 295 aa11.29□□□□□ -0.6
Ubr3-201ENSMUST00000055758 A530084C06RikQ3UTW2 186 aa11.29□□□□□ -0.6
Ubr3-201ENSMUST00000055758 Cdip1Q9DB75 208 aa11.29□□□□□ -0.6
Ubr3-201ENSMUST00000055758 Pla2g10Q9QXX3 151 aa11.27□□□□□ -0.61
Ubr3-201ENSMUST00000055758 Cox6a2P43023 97 aa11.27□□□□□ -0.61
Ubr3-201ENSMUST00000055758 Ly6g6cQ9Z1Q4 126 aa11.27□□□□□ -0.61
Ubr3-201ENSMUST00000055758 Mrpl34Q99N91 92 aa11.26□□□□□ -0.61
Ubr3-201ENSMUST00000055758 Phxr5P08399 672 aa11.25□□□□□ -0.61
Ubr3-201ENSMUST00000055758 Limd2Q8BGB5 128 aa11.25□□□□□ -0.61
Ubr3-201ENSMUST00000055758 Ighv2-5A0A0A6YY69 116 aa11.25□□□□□ -0.61
Ubr3-201ENSMUST00000055758 HrnrQ8VHD8 2496 aa11.24□□□□□ -0.61
Ubr3-201ENSMUST00000055758 Tln1P26039 2541 aaKnown RBP11.24□□□□□ -0.61
Ubr3-201ENSMUST00000055758 A930002H24RikQ8C8Y3 163 aa11.24□□□□□ -0.61
Ubr3-201ENSMUST00000055758 6430550D23RikE9Q1X6 194 aa11.23□□□□□ -0.61
Ubr3-201ENSMUST00000055758 Lrrk2Q5S006 2527 aa11.23□□□□□ -0.61
Ubr3-201ENSMUST00000055758 Gm28374F6SG70 93 aa11.23□□□□□ -0.61
Ubr3-201ENSMUST00000055758 B230217C12RikE9Q3Z1 139 aa11.23□□□□□ -0.61
Ubr3-201ENSMUST00000055758 Gm17509Q9CZ61 145 aa11.21□□□□□ -0.61
Ubr3-201ENSMUST00000055758 Ankhd1E9PUR0 2548 aaKnown RBP11.21□□□□□ -0.62
Ubr3-201ENSMUST00000055758 Gm9925F6T2U3 160 aa11.2□□□□□ -0.62
Ubr3-201ENSMUST00000055758 Gm9922Q8C3P1 144 aa11.19□□□□□ -0.62
Ubr3-201ENSMUST00000055758 Setd2E9Q5F9 2537 aa11.18□□□□□ -0.62
Ubr3-201ENSMUST00000055758 1700056E22RikF7CNM6 234 aa11.18□□□□□ -0.62
Ubr3-201ENSMUST00000055758 Gm10549Q3URY4 149 aa11.18□□□□□ -0.62
Ubr3-201ENSMUST00000055758 Zfand2aQ9JII7 171 aa11.18□□□□□ -0.62
Ubr3-201ENSMUST00000055758 AvpP35455 168 aa11.17□□□□□ -0.62
Ubr3-201ENSMUST00000055758 Lce6aD3YV94 81 aa11.16□□□□□ -0.62
Ubr3-201ENSMUST00000055758 Q8BGJ3 129 aa11.16□□□□□ -0.62
Ubr3-201ENSMUST00000055758 CrygaP04345 174 aa11.16□□□□□ -0.62
Ubr3-201ENSMUST00000055758 PcntP48725 2898 aa11.15□□□□□ -0.62
Ubr3-201ENSMUST00000055758 4930507D05RikQ8C9C9 103 aa11.15□□□□□ -0.62
Ubr3-201ENSMUST00000055758 Msrb1Q9JLC3 116 aa11.15□□□□□ -0.62
Ubr3-201ENSMUST00000055758 Fam19a3Q7TPG6 132 aa11.14□□□□□ -0.63
Ubr3-201ENSMUST00000055758 D730001G18RikA0A087WQU7 115 aa11.14□□□□□ -0.63
Ubr3-201ENSMUST00000055758 Rps28P62858 69 aaKnown RBP11.14□□□□□ -0.63
Ubr3-201ENSMUST00000055758 Znf580Q9DB38 172 aa11.14□□□□□ -0.63
Ubr3-201ENSMUST00000055758 Gm16485Q8C4B7 115 aa11.13□□□□□ -0.63
Ubr3-201ENSMUST00000055758 Krtap27-1E9PX37 202 aa11.12□□□□□ -0.63
Ubr3-201ENSMUST00000055758 Gm10300Q8C8P7 189 aa11.12□□□□□ -0.63
Ubr3-201ENSMUST00000055758 A930009A15RikG3UYI6 118 aa11.12□□□□□ -0.63
Ubr3-201ENSMUST00000055758 Epg5Q80TA9 2572 aa11.11□□□□□ -0.63
Ubr3-201ENSMUST00000055758 2310034G01RikA0A286YDL3 209 aa11.11□□□□□ -0.63
Ubr3-201ENSMUST00000055758 Crip3Q6Q6R3 243 aa11.11□□□□□ -0.63
Ubr3-201ENSMUST00000055758 B430305J03RikQ8BQQ8 176 aa11.11□□□□□ -0.63
Ubr3-201ENSMUST00000055758 Cdc42se1Q8BHL7 80 aa11.1□□□□□ -0.63
Ubr3-201ENSMUST00000055758 Q9DAA7 145 aa11.1□□□□□ -0.63
Ubr3-201ENSMUST00000055758 Rtl10D3YWW5 146 aa11.06□□□□□ -0.64
Ubr3-201ENSMUST00000055758 Znf575Q3TXZ1 239 aa11.06□□□□□ -0.64
Ubr3-201ENSMUST00000055758 MtorQ9JLN9 2549 aa11.05□□□□□ -0.64
Ubr3-201ENSMUST00000055758 Gm9767G3X930 207 aa11.05□□□□□ -0.64
Ubr3-201ENSMUST00000055758 Gm3443F7CCV5 94 aa11.05□□□□□ -0.64
Ubr3-201ENSMUST00000055758 7530416G11RikJ3QJX6 159 aa11.04□□□□□ -0.64
Ubr3-201ENSMUST00000055758 Col4a4Q9QZR9 1682 aa11.04□□□□□ -0.64
Ubr3-201ENSMUST00000055758 Cd164l2Q9D6W7 172 aa11.04□□□□□ -0.64
Ubr3-201ENSMUST00000055758 CriptO70333 101 aa11.04□□□□□ -0.64
Ubr3-201ENSMUST00000055758 1700018G05RikA0A1B0GSI2 66 aa11.04□□□□□ -0.64
Ubr3-201ENSMUST00000055758 AI606181Q8C7B9 129 aa11.04□□□□□ -0.64
Ubr3-201ENSMUST00000055758 Odf3l2Q3TZ65 277 aa11.02□□□□□ -0.64
Ubr3-201ENSMUST00000055758 Col27a1Q5QNQ9 1845 aa11.02□□□□□ -0.65
Ubr3-201ENSMUST00000055758 Ighv8-13A0A075B5Y0 101 aa11.02□□□□□ -0.65
Ubr3-201ENSMUST00000055758 Smr3aQ61900 147 aa11.01□□□□□ -0.65
Ubr3-201ENSMUST00000055758 Gm10642Q3TWM1 71 aa10.99□□□□□ -0.65
Ubr3-201ENSMUST00000055758 Bri3P28662 125 aa10.99□□□□□ -0.65
Ubr3-201ENSMUST00000055758 Piezo1E2JF22 2547 aa10.98□□□□□ -0.65
Ubr3-201ENSMUST00000055758 Gm26661M0QWV4 156 aa10.98□□□□□ -0.65
Ubr3-201ENSMUST00000055758 Krtap16-1A2A5X5 502 aa10.98□□□□□ -0.65
Ubr3-201ENSMUST00000055758 Gm21886J3QJU9 214 aa10.98□□□□□ -0.65
Ubr3-201ENSMUST00000055758 AI854703Q8BIN3 203 aa10.97□□□□□ -0.65
Ubr3-201ENSMUST00000055758 Prr13Q9CQJ5 137 aa10.97□□□□□ -0.65
Ubr3-201ENSMUST00000055758 Pla2g2cP48076 150 aa10.97□□□□□ -0.65
Ubr3-201ENSMUST00000055758 Usp9xP70398 2559 aaKnown RBP10.96□□□□□ -0.65
Ubr3-201ENSMUST00000055758 Q9DAB9 146 aa10.95□□□□□ -0.66
Ubr3-201ENSMUST00000055758 Gm44790A0A0N4SV91 103 aa10.94□□□□□ -0.66
Ubr3-201ENSMUST00000055758 Rpl37aP61514 92 aa10.93□□□□□ -0.66
Ubr3-201ENSMUST00000055758 Usp24B1AY13 2617 aaKnown RBP10.93□□□□□ -0.66
Ubr3-201ENSMUST00000055758 3110070M22RikQ9DAQ7 118 aa10.91□□□□□ -0.66
Ubr3-201ENSMUST00000055758 Defb2P82020 71 aa10.89□□□□□ -0.67
Ubr3-201ENSMUST00000055758 Dmac1Q9CQ00 111 aa10.88□□□□□ -0.67
Ubr3-201ENSMUST00000055758 Coa5Q99M07 74 aa10.88□□□□□ -0.67
Ubr3-201ENSMUST00000055758 Gm9903Q8C9Y8 129 aa10.86□□□□□ -0.67
Ubr3-201ENSMUST00000055758 Spaca4Q80ZQ0 127 aa10.86□□□□□ -0.67
Ubr3-201ENSMUST00000055758 Gm27235Q3UW50 83 aa10.86□□□□□ -0.67
Ubr3-201ENSMUST00000055758 Nbeal1E9PYP2 2688 aa10.86□□□□□ -0.67
Ubr3-201ENSMUST00000055758 Gm5464Q3UY29 175 aa10.85□□□□□ -0.67
Ubr3-201ENSMUST00000055758 Prr9Q8BV84 116 aa10.85□□□□□ -0.67
Ubr3-201ENSMUST00000055758 Ighv2-2A0A075B5P8 116 aa10.85□□□□□ -0.67
Ubr3-201ENSMUST00000055758 P01821 116 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms