RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 CrygdP04342 174 aa8□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Gm10845Q3UNY9 185 aa8□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Defb18Q30KP5 85 aa8□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Cd99Q8VCN6 175 aa8□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Cdk2ap2Q9CPY4 127 aa8□□□□□ -1.13
Topbp1-201ENSMUST00000035164 SnurfQ9WU12 71 aa8□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Igkv8-18A0A0B4J1J3 123 aa7.99□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Inafm2A0A1L1STD6 152 aa7.99□□□□□ -1.13
Topbp1-201ENSMUST00000035164 FlnbQ80X90 2602 aaKnown RBP7.99□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Trav9n-4A0A075B631 113 aa7.99□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Igkv3-9A0A140T8P4 119 aa7.98□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Rnf152Q8BG47 203 aa7.98□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Tep1P97499 2629 aa7.98□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Sfta2E9PXB6 77 aa7.97□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Bri3P28662 125 aa7.97□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Klk11Q9QYN3 276 aa7.97□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Tmem258P61166 79 aa7.97□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Krtap26-1Q9D7N2 215 aa7.97□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Higd2aQ9CQJ1 106 aa7.96□□□□□ -1.13
Topbp1-201ENSMUST00000035164 A0A286YE02 88 aa7.96□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Gm8439G3UWA7 96 aa7.96□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Fam19a5Q91WE9 132 aa7.95□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Zfand2aQ9JII7 171 aa7.95□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Ube2d4D3YUH6 135 aa7.95□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Vpreb1P13372 142 aa7.95□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Ccl21aP84444 133 aa7.95□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Ccl21bP86792 133 aa7.95□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Ccl21cP86793 133 aa7.95□□□□□ -1.14
Topbp1-201ENSMUST00000035164 A830031A19RikQ8BNT5 113 aa7.95□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Lyrm9Q3UN90 78 aa7.94□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Igkv8-26A0A075B5N5 123 aa7.94□□□□□ -1.14
Topbp1-201ENSMUST00000035164 CrygaP04345 174 aa7.94□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Gm9805F6YK59 57 aa7.93□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Ifitm6A0A1B0GS75 124 aa7.92□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Ufsp1Q9CZP0 217 aa7.92□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Fam19a3Q7TPG6 132 aa7.9□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Kmt2bO08550 2713 aa7.9□□□□□ -1.14
Topbp1-201ENSMUST00000035164 MobpQ9D2P8 170 aa7.9□□□□□ -1.14
Topbp1-201ENSMUST00000035164 CicQ924A2 2510 aa7.9□□□□□ -1.14
Topbp1-201ENSMUST00000035164 Spink8Q09TK9 105 aa7.89□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Cystm1Q8K353 104 aa7.89□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Gm19935A0A1B0GSF9 52 aa7.89□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Klk9Q32M27 251 aa7.89□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Ighv1-56A0A0A6YXG2 117 aa7.89□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Gm3250E9Q1M3 230 aa7.88□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Ly6c2P0CW03 131 aa7.88□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Prr15lQ8JZM2 100 aa7.88□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Defb37Q7TMD2 62 aa7.88□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Q9DAA7 145 aa7.88□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Stab1Q8R4Y4 2571 aa7.87□□□□□ -1.15
Topbp1-201ENSMUST00000035164 1810062G17RikG3X8Y2 129 aa7.87□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Gm17577J3QNF7 156 aa7.86□□□□□ -1.15
Topbp1-201ENSMUST00000035164 9530003J23RikQ8BM26 151 aa7.86□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Chchd7Q8K2Q5 85 aa7.86□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Gm5153P01627 120 aa7.86□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Gm10772F7AIG4 85 aa7.86□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Fam229bQ8CF36 80 aa7.86□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Gpha2Q925Q5 128 aa7.85□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Defb50Q6TU36 73 aa7.85□□□□□ -1.15
Topbp1-201ENSMUST00000035164 4930519P11RikQ9CUJ8 166 aa7.85□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Igkv8-27A0A0G2JF28 120 aa7.84□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Igkv8-30A0A140T8M3 121 aa7.84□□□□□ -1.15
Topbp1-201ENSMUST00000035164 SmcpP15265 143 aa7.84□□□□□ -1.15
Topbp1-201ENSMUST00000035164 BC048502Q80Y74 154 aa7.84□□□□□ -1.15
Topbp1-201ENSMUST00000035164 Igkv8-21A0A140T8P7 120 aa7.84□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Camk2n2Q78WH7 79 aa7.84□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Gm17689B3GLJ4 109 aa7.83□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Gm11011D3Z3L9 86 aa7.83□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Nsd1O88491 2588 aaKnown RBP7.83□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Ighv10-1A0A0B4J1J6 119 aa7.83□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Igkv8-34A0A0G2JDU0 121 aa7.83□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Gm9903Q8C9Y8 129 aa7.83□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Lypd5Q9D7Z7 256 aa7.83□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Ighv2-9-1A0A075B697 116 aa7.82□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Defb40Q70KL2 73 aa7.82□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Srsf12Q8C8K3 266 aa7.82□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Ighv10-3A0A075B5T6 119 aa7.82□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Mrpl52Q9D0Y8 121 aa7.82□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Ighv1-59A0A0A6YXE0 117 aa7.82□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Krtap16-1A2A5X5 502 aa7.82□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Odf3l2Q3TZ65 277 aa7.81□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Ntn5Q3UQ22 452 aa7.81□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Vpreb2P13373 142 aa7.8□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Reg3bP35230 175 aa7.8□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Rps28P62858 69 aaKnown RBP7.8□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Igkv3-2A0A075B5P0 119 aa7.79□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Spink4O35679 86 aa7.79□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Cox7b2Q9D2H1 82 aa7.78□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Mast4Q811L6 2618 aa7.78□□□□□ -1.16
Topbp1-201ENSMUST00000035164 9430015G10RikA2ASP7 199 aa7.78□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Tcl1b3P56842 122 aa7.78□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Msrb1Q9JLC3 116 aa7.78□□□□□ -1.16
Topbp1-201ENSMUST00000035164 Col6a5A6H584 2640 aa7.77□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Cox7bP56393 80 aa7.77□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Ndufc1Q9CQY9 76 aa7.77□□□□□ -1.17
Topbp1-201ENSMUST00000035164 4930556J24RikQ9D4U7 146 aa7.77□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Nbeal2Q6ZQA0 2742 aa7.76□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Pde6gP09174 87 aa7.76□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Gm9767G3X930 207 aa7.76□□□□□ -1.17
Topbp1-201ENSMUST00000035164 FasnP19096 2504 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms