RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Glrp1E9Q9S8 174 aa9.37□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Akap13E9Q394 2776 aa9.37□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Vpreb2P13373 142 aa9.36□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Plac8l1Q08EJ0 177 aa9.36□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Trav9n-2A0A0G2JDP3 113 aa9.36□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 4930415O20RikQ8CDT5 131 aa9.36□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Trav13-2A0A075B649 110 aa9.35□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Ighv1-62-1A0A075B5U3 116 aa9.34□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Mapk1ip1lQ8BH93 242 aa9.34□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 MobpQ9D2P8 170 aa9.34□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Fgf23Q9EPC2 251 aa9.34□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Fam104aA2A6P4 185 aa9.34□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Dad1P61804 113 aa9.34□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Zfand2aQ9JII7 171 aa9.34□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Gm3250E9Q1M3 230 aa9.33□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Gm10772F7AIG4 85 aa9.33□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Rpl28P41105 137 aaKnown RBP9.33□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Gm10837Q3UTT8 145 aa9.33□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 SpinklQ8CEK3 90 aa9.32□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Eif4ebp3Q80VV3 101 aa9.31□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Gm9903Q8C9Y8 129 aa9.31□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Krtap24-1G3X9A2 248 aa9.31□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Gm10542F6XDR3 90 aa9.3□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Smim26Q3V460 107 aa9.29□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 P01823 113 aa9.29□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 BikO70337 150 aa9.29□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 4933415A04RikQ9D443 101 aa9.29□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Igkv4-79A0A075B5L8 119 aa9.28□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Trav13n-1A0A0G2JEU8 110 aa9.28□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Prp2P05143 317 aa9.28□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 NipblQ6KCD5 2798 aaKnown RBP9.28□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Ighv2-9A0A075B5Q5 116 aa9.28□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Igkv4-61A0A0G2JH00 117 aa9.28□□□□□ -0.92
Prpf38b-201ENSMUST00000029480 Odf3l2Q3TZ65 277 aa9.27□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Spink1P09036 80 aa9.27□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Ighv1-56A0A0A6YXG2 117 aa9.26□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 SelenowP63300 88 aa9.26□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Gm26620Q9CY65 116 aa9.26□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Igkv3-10A0A0G2JGN0 119 aa9.26□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Defb50Q6TU36 73 aa9.26□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Trav14-1A0A0G2JF94 121 aa9.25□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Tmem254aP0DN89 123 aa9.25□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Tmem254bP0DN90 123 aa9.25□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Tmem254cP0DN91 123 aa9.25□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Trav13-4-dv7A0A075B6C2 110 aa9.25□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Trav13d-4A0A0G2JFX3 110 aa9.25□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Spink8Q09TK9 105 aa9.25□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 9530053A07RikE9PVG8 2581 aa9.24□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Gm5617Q91VN2 117 aa9.24□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Brwd1Q921C3 2304 aa9.24□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 CicQ924A2 2510 aa9.24□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Ifitm6A0A1B0GS75 124 aa9.24□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Cox6b1P56391 86 aaKnown RBP9.24□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 UqcrqQ9CQ69 82 aa9.24□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Inafm2A0A1L1STD6 152 aa9.23□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Hspg2Q05793 3707 aaKnown RBP9.23□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Dnal4Q9DCM4 105 aa9.23□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Ly6hQ9WUC3 139 aa9.23□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 FlnbQ80X90 2602 aaKnown RBP9.22□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Lst1O08843 95 aa9.22□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Gm3233E9Q2H5 230 aa9.22□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 PrlhG3UWC3 86 aa9.22□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Sostdc1Q9CQN4 206 aa9.21□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Fbn1Q61554 2873 aaKnown RBP9.21□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Hivep3A2A884 2348 aa9.21□□□□□ -0.93
Prpf38b-201ENSMUST00000029480 Nop10Q9CQS2 64 aa9.21□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Phpt1Q9DAK9 124 aa9.21□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Ighv1-59A0A0A6YXE0 117 aa9.2□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Tenm4Q3UHK6 2771 aa9.2□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 MplkipQ9D011 178 aa9.2□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Igkv4-54A0A0G2JES9 117 aa9.18□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 P01745 121 aa9.18□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Ly6c2P0CW03 131 aa9.18□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Ufsp1Q9CZP0 217 aa9.18□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 1700011M02RikB1AX35 88 aa9.18□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Gm10643Q3URG9 111 aa9.18□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Trav9d-3A0A075B695 113 aa9.17□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Gm7257D3YX25 99 aa9.17□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Trav9d-4A0A0G2JG37 103 aa9.17□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Gm16381A0A1Y7VKT9 73 aa9.17□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Gm10197F6QEY5 67 aa9.16□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Vmo1Q5SXG7 201 aa9.15□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Fam229bQ8CF36 80 aa9.15□□□□□ -0.94
Prpf38b-201ENSMUST00000029480 Igkv6-13A0A0G2JGY3 119 aa9.14□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Defb10Q8R2I8 73 aa9.14□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 AtrQ9JKK8 2635 aa9.14□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 AI606181Q8C7B9 129 aa9.13□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Spata3Q9D9T6 193 aa9.13□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Trav13n-2A0A0G2JF93 110 aa9.13□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 2010109I03RikQ9CQ11 111 aa9.13□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Ighv8-13A0A075B5Y0 101 aa9.12□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Ighv1-49A0A0A6YWX2 117 aa9.12□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Cox7bP56393 80 aa9.11□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Wfdc17Q5SSJ1 76 aa9.11□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Fn1P11276 2477 aaKnown RBP9.1□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Igkv4-53A0A0G2JFC6 119 aa9.1□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Gm10647E9Q8X0 124 aa9.1□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 EnhoQ8K1D8 76 aa9.1□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Ndufc1Q9CQY9 76 aa9.1□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 4930524J08RikQ9CUJ5 163 aa9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms