RNA–Protein interactions for RNA: ENSMUST00000002412.8

Ncan-201, Transcript of Neurocan core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncan, Length 7,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncan-201ENSMUST00000002412 Gm21886J3QJU9 214 aa8.89□□□□□ -0.99
Ncan-201ENSMUST00000002412 CnfnQ6PCW6 111 aa8.89□□□□□ -0.99
Ncan-201ENSMUST00000002412 Odf3l2Q3TZ65 277 aa8.88□□□□□ -0.99
Ncan-201ENSMUST00000002412 Bri3P28662 125 aa8.88□□□□□ -0.99
Ncan-201ENSMUST00000002412 Crip3Q6Q6R3 243 aa8.88□□□□□ -0.99
Ncan-201ENSMUST00000002412 Limd2Q8BGB5 128 aa8.88□□□□□ -0.99
Ncan-201ENSMUST00000002412 Prr13Q9CQJ5 137 aa8.88□□□□□ -0.99
Ncan-201ENSMUST00000002412 Wdr90Q6ZPG2 1874 aa8.87□□□□□ -0.99
Ncan-201ENSMUST00000002412 PtprbB2RU80 1998 aa8.87□□□□□ -0.99
Ncan-201ENSMUST00000002412 AI606181Q8C7B9 129 aa8.86□□□□□ -0.99
Ncan-201ENSMUST00000002412 Gm10549Q3URY4 149 aa8.84□□□□□ -0.99
Ncan-201ENSMUST00000002412 Gm9922Q8C3P1 144 aa8.84□□□□□ -0.99
Ncan-201ENSMUST00000002412 Sec16aA2AIX1 2377 aa8.84□□□□□ -0.99
Ncan-201ENSMUST00000002412 DscamQ9ERC8 2013 aa8.84□□□□□ -0.99
Ncan-201ENSMUST00000002412 AI854703Q8BIN3 203 aa8.83□□□□□ -1
Ncan-201ENSMUST00000002412 Rps28P62858 69 aaKnown RBP8.83□□□□□ -1
Ncan-201ENSMUST00000002412 Spaca4Q80ZQ0 127 aa8.82□□□□□ -1
Ncan-201ENSMUST00000002412 4930507D05RikQ8C9C9 103 aa8.81□□□□□ -1
Ncan-201ENSMUST00000002412 Coa5Q99M07 74 aa8.81□□□□□ -1
Ncan-201ENSMUST00000002412 Col4a5Q63ZW6 1691 aa8.8□□□□□ -1
Ncan-201ENSMUST00000002412 Ighv8-13A0A075B5Y0 101 aa8.8□□□□□ -1
Ncan-201ENSMUST00000002412 Gm9925F6T2U3 160 aa8.79□□□□□ -1
Ncan-201ENSMUST00000002412 Cspg4Q8VHY0 2327 aa8.79□□□□□ -1
Ncan-201ENSMUST00000002412 SonQ9QX47 2444 aaKnown RBP8.79□□□□□ -1
Ncan-201ENSMUST00000002412 Krtap16-1A2A5X5 502 aa8.79□□□□□ -1
Ncan-201ENSMUST00000002412 Gm9767G3X930 207 aa8.79□□□□□ -1
Ncan-201ENSMUST00000002412 Cd164l2Q9D6W7 172 aa8.78□□□□□ -1
Ncan-201ENSMUST00000002412 AcacbE9Q4Z2 2448 aa8.78□□□□□ -1
Ncan-201ENSMUST00000002412 Gm17689B3GLJ4 109 aa8.78□□□□□ -1
Ncan-201ENSMUST00000002412 Nav2E9Q842 2432 aa8.77□□□□□ -1
Ncan-201ENSMUST00000002412 Lce6aD3YV94 81 aa8.77□□□□□ -1
Ncan-201ENSMUST00000002412 Rtl10D3YWW5 146 aa8.77□□□□□ -1.01
Ncan-201ENSMUST00000002412 A930009A15RikG3UYI6 118 aa8.77□□□□□ -1.01
Ncan-201ENSMUST00000002412 Kiaa1549Q68FD9 1940 aa8.77□□□□□ -1.01
Ncan-201ENSMUST00000002412 Gpr15lA0A0B4J1N3 78 aa8.77□□□□□ -1.01
Ncan-201ENSMUST00000002412 PtprqP0C5E4 2300 aa8.77□□□□□ -1.01
Ncan-201ENSMUST00000002412 Nav3Q80TN7 2359 aa8.76□□□□□ -1.01
Ncan-201ENSMUST00000002412 B430305J03RikQ8BQQ8 176 aa8.76□□□□□ -1.01
Ncan-201ENSMUST00000002412 Gm26661M0QWV4 156 aa8.75□□□□□ -1.01
Ncan-201ENSMUST00000002412 Gm10770F7D043 238 aa8.74□□□□□ -1.01
Ncan-201ENSMUST00000002412 Phf5aP83870 110 aaKnown RBP8.74□□□□□ -1.01
Ncan-201ENSMUST00000002412 Gm5617Q91VN2 117 aa8.74□□□□□ -1.01
Ncan-201ENSMUST00000002412 Smr3aQ61900 147 aa8.73□□□□□ -1.01
Ncan-201ENSMUST00000002412 Krtap27-1E9PX37 202 aa8.72□□□□□ -1.01
Ncan-201ENSMUST00000002412 CriptO70333 101 aa8.72□□□□□ -1.01
Ncan-201ENSMUST00000002412 Gm9903Q8C9Y8 129 aa8.71□□□□□ -1.01
Ncan-201ENSMUST00000002412 Gm3443F7CCV5 94 aa8.71□□□□□ -1.02
Ncan-201ENSMUST00000002412 AvpP35455 168 aa8.71□□□□□ -1.02
Ncan-201ENSMUST00000002412 Lrp4Q8VI56 1905 aa8.7□□□□□ -1.02
Ncan-201ENSMUST00000002412 Pla2g2cP48076 150 aa8.7□□□□□ -1.02
Ncan-201ENSMUST00000002412 Hivep3A2A884 2348 aa8.68□□□□□ -1.02
Ncan-201ENSMUST00000002412 Gm27235Q3UW50 83 aa8.67□□□□□ -1.02
Ncan-201ENSMUST00000002412 Tns1E9Q0S6 1888 aaKnown RBP8.65□□□□□ -1.02
Ncan-201ENSMUST00000002412 Defb2P82020 71 aa8.65□□□□□ -1.02
Ncan-201ENSMUST00000002412 Dopey1Q8BL99 2399 aa8.64□□□□□ -1.03
Ncan-201ENSMUST00000002412 Dmac1Q9CQ00 111 aa8.64□□□□□ -1.03
Ncan-201ENSMUST00000002412 Elof1P60003 83 aa8.64□□□□□ -1.03
Ncan-201ENSMUST00000002412 Gm3880A0A1B0GSB3 72 aa8.63□□□□□ -1.03
Ncan-201ENSMUST00000002412 Ighv2-2A0A075B5P8 116 aa8.63□□□□□ -1.03
Ncan-201ENSMUST00000002412 P01821 116 aa8.63□□□□□ -1.03
Ncan-201ENSMUST00000002412 Q8BT88 171 aa8.62□□□□□ -1.03
Ncan-201ENSMUST00000002412 Znf575Q3TXZ1 239 aa8.61□□□□□ -1.03
Ncan-201ENSMUST00000002412 Defb10Q8R2I8 73 aa8.61□□□□□ -1.03
Ncan-201ENSMUST00000002412 Myo9aQ8C170 2542 aa8.61□□□□□ -1.03
Ncan-201ENSMUST00000002412 Phxr4P15974 95 aa8.6□□□□□ -1.03
Ncan-201ENSMUST00000002412 Srsf12Q8C8K3 266 aa8.6□□□□□ -1.03
Ncan-201ENSMUST00000002412 Gm11213A0A1B0GR83 88 aa8.59□□□□□ -1.03
Ncan-201ENSMUST00000002412 Fam168bQ80XQ8 194 aa8.59□□□□□ -1.03
Ncan-201ENSMUST00000002412 Igf2rQ07113 2483 aaKnown RBP8.58□□□□□ -1.04
Ncan-201ENSMUST00000002412 SrcapA0A087WQ44 3271 aa8.58□□□□□ -1.04
Ncan-201ENSMUST00000002412 Spg11Q3UHA3 2430 aa8.57□□□□□ -1.04
Ncan-201ENSMUST00000002412 MobpQ9D2P8 170 aa8.57□□□□□ -1.04
Ncan-201ENSMUST00000002412 NbasE9Q411 2356 aa8.57□□□□□ -1.04
Ncan-201ENSMUST00000002412 Ncor1Q60974 2453 aa8.56□□□□□ -1.04
Ncan-201ENSMUST00000002412 Q9DAB9 146 aa8.56□□□□□ -1.04
Ncan-201ENSMUST00000002412 Gm10308Q9CVR5 141 aa8.55□□□□□ -1.04
Ncan-201ENSMUST00000002412 3110070M22RikQ9DAQ7 118 aa8.55□□□□□ -1.04
Ncan-201ENSMUST00000002412 Uqcr11Q9CPX8 56 aa8.53□□□□□ -1.04
Ncan-201ENSMUST00000002412 Gm11627A6PWP4 55 aa8.53□□□□□ -1.04
Ncan-201ENSMUST00000002412 BC067074F6RXI4 2391 aa8.51□□□□□ -1.05
Ncan-201ENSMUST00000002412 Snhg11Q4G0K9 87 aa8.49□□□□□ -1.05
Ncan-201ENSMUST00000002412 Gm10643Q3URG9 111 aa8.49□□□□□ -1.05
Ncan-201ENSMUST00000002412 E130208F15RikQ3UPV3 143 aa8.49□□□□□ -1.05
Ncan-201ENSMUST00000002412 Prr9Q8BV84 116 aa8.46□□□□□ -1.05
Ncan-201ENSMUST00000002412 Gm5464Q3UY29 175 aa8.46□□□□□ -1.05
Ncan-201ENSMUST00000002412 Flg2Q2VIS4 2362 aa8.46□□□□□ -1.06
Ncan-201ENSMUST00000002412 Gm7276Q3TYW4 209 aa8.46□□□□□ -1.06
Ncan-201ENSMUST00000002412 OtoglF7A4A7 2325 aa8.46□□□□□ -1.06
Ncan-201ENSMUST00000002412 Pcsk5Q04592 1877 aa8.46□□□□□ -1.06
Ncan-201ENSMUST00000002412 Pkd1l2Q7TN88 2461 aa8.45□□□□□ -1.06
Ncan-201ENSMUST00000002412 Rif1Q6PR54 2419 aaKnown RBP8.43□□□□□ -1.06
Ncan-201ENSMUST00000002412 A330070K13RikQ8CA53 115 aa8.43□□□□□ -1.06
Ncan-201ENSMUST00000002412 Anapc11Q9CPX9 84 aa8.43□□□□□ -1.06
Ncan-201ENSMUST00000002412 Gm10837Q3UTT8 145 aa8.43□□□□□ -1.06
Ncan-201ENSMUST00000002412 Spata3Q9D9T6 193 aa8.42□□□□□ -1.06
Ncan-201ENSMUST00000002412 Spink7Q6IE32 76 aa8.41□□□□□ -1.06
Ncan-201ENSMUST00000002412 Gm21798J3QNU5 87 aa8.39□□□□□ -1.07
Ncan-201ENSMUST00000002412 Chtf8P0CG14 533 aa8.39□□□□□ -1.07
Ncan-201ENSMUST00000002412 Eif4ebp3Q80VV3 101 aa8.39□□□□□ -1.07
Ncan-201ENSMUST00000002412 Fam229bQ8CF36 80 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms