RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Col24a1Q30D77 1733 aa6.6□□□□□ -1.35
Ptpre-204ENSMUST00000209979 B230217C12RikE9Q3Z1 139 aa6.59□□□□□ -1.35
Ptpre-204ENSMUST00000209979 Rai1Q61818 1889 aa6.59□□□□□ -1.35
Ptpre-204ENSMUST00000209979 MgamB5THE2 1827 aa6.59□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Pcdh15Q99PJ1 1943 aa6.58□□□□□ -1.36
Ptpre-204ENSMUST00000209979 TroQ6DIC6 2087 aa6.58□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Ep300B2RWS6 2412 aa6.58□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Prrc2aQ7TSC1 2158 aaKnown RBP6.58□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Gvin1Q80SU7 2427 aa6.58□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Defb38Q7TNV7 63 aa6.58□□□□□ -1.36
Ptpre-204ENSMUST00000209979 1700056E22RikF7CNM6 234 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 F5O88783 2183 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Tanc2A2A690 1994 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Fhl2O70433 279 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Lmo4P61969 165 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Prr13Q9CQJ5 137 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 AgrnA2ASQ1 1950 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Igkv8-28A0A0G2JE47 121 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Mp68P56379 58 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Defb45Q3V490 66 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Cdc42se1Q8BHL7 80 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Col4a6B1AVK5 1691 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Col5a3Q9JLI2 1739 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Rtl10D3YWW5 146 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Gm17509Q9CZ61 145 aa6.57□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Plxnb3Q9QY40 1902 aa6.56□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Sostdc1Q9CQN4 206 aa6.56□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Sdk2Q6V4S5 2176 aa6.56□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Q9DAB9 146 aa6.56□□□□□ -1.36
Ptpre-204ENSMUST00000209979 A0A286YCN5 57 aa6.56□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Pip4p1Q3TWL2 284 aa6.56□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Chchd10Q7TNL9 138 aa6.56□□□□□ -1.36
Ptpre-204ENSMUST00000209979 U90926O08546 118 aa6.55□□□□□ -1.36
Ptpre-204ENSMUST00000209979 P06329 120 aa6.55□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Zfand2aQ9JII7 171 aa6.55□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Rif1Q6PR54 2419 aaKnown RBP6.54□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Wfdc13Q5DQQ6 81 aa6.54□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Gm9913Q8BQQ2 135 aa6.54□□□□□ -1.36
Ptpre-204ENSMUST00000209979 2310034G01RikA0A286YDL3 209 aa6.54□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Odf3l2Q3TZ65 277 aa6.54□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Defb42Q8BVB5 75 aa6.54□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Gpha2Q925Q5 128 aa6.54□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Znf414Q9DCK4 299 aa6.54□□□□□ -1.36
Ptpre-204ENSMUST00000209979 SonQ9QX47 2444 aaKnown RBP6.54□□□□□ -1.36
Ptpre-204ENSMUST00000209979 E130116L18RikQ8BMV6 101 aa6.53□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Gm9922Q8C3P1 144 aa6.53□□□□□ -1.36
Ptpre-204ENSMUST00000209979 4930519P11RikQ9CUJ8 166 aa6.53□□□□□ -1.36
Ptpre-204ENSMUST00000209979 PtprsB0V2N1 1907 aa6.52□□□□□ -1.36
Ptpre-204ENSMUST00000209979 Ly6c2P0CW03 131 aa6.52□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Fam19a3Q7TPG6 132 aa6.52□□□□□ -1.37
Ptpre-204ENSMUST00000209979 AI606181Q8C7B9 129 aa6.52□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Tcf20Q9EPQ8 1987 aa6.52□□□□□ -1.37
Ptpre-204ENSMUST00000209979 3110070M22RikQ9DAQ7 118 aa6.51□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Gm28230A0A0A0MQ91 144 aa6.51□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Mrpl34Q99N91 92 aa6.51□□□□□ -1.37
Ptpre-204ENSMUST00000209979 6430550D23RikE9Q1X6 194 aa6.5□□□□□ -1.37
Ptpre-204ENSMUST00000209979 PrlhG3UWC3 86 aa6.5□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Gm9925F6T2U3 160 aa6.5□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Cox6a2P43023 97 aa6.5□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Gm10308Q9CVR5 141 aa6.5□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Cspg4Q8VHY0 2327 aa6.5□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Fer1l4A3KGK3 1992 aa6.49□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Gm17606F6ZL36 78 aa6.49□□□□□ -1.37
Ptpre-204ENSMUST00000209979 NrgnP60761 78 aa6.49□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Igkv8-19A0A0G2JFN8 121 aa6.48□□□□□ -1.37
Ptpre-204ENSMUST00000209979 7530416G11RikJ3QJX6 159 aa6.48□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Q9DAA7 145 aa6.48□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Wnk1P83741 2377 aa6.48□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Dennd4cA6H8H2 1906 aa6.48□□□□□ -1.37
Ptpre-204ENSMUST00000209979 PscaP57096 123 aa6.48□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Gm10300Q8C8P7 189 aa6.48□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Nup210Q9QY81 1886 aaKnown RBP6.48□□□□□ -1.37
Ptpre-204ENSMUST00000209979 A730009L09RikA0A1B0GS82 72 aa6.48□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Piezo1E2JF22 2547 aa6.48□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Reg3aO09037 175 aa6.48□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Phxr4P15974 95 aa6.47□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Nupr2Q497P3 102 aa6.47□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Elof1P60003 83 aa6.47□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Msrb1Q9JLC3 116 aa6.47□□□□□ -1.37
Ptpre-204ENSMUST00000209979 Gm20661K7N787 53 aa6.46□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Tet2Q4JK59 1912 aaKnown RBP6.46□□□□□ -1.38
Ptpre-204ENSMUST00000209979 AcanQ61282 2132 aaKnown RBP6.46□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Pla2g1bQ9Z0Y2 146 aa6.46□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Alms1Q8K4E0 3251 aa6.46□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Sorl1O88307 2215 aaKnown RBP6.46□□□□□ -1.38
Ptpre-204ENSMUST00000209979 FshbQ60687 130 aa6.46□□□□□ -1.38
Ptpre-204ENSMUST00000209979 AI854703Q8BIN3 203 aa6.45□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Igkv8-27A0A0G2JF28 120 aa6.45□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Wfdc17Q5SSJ1 76 aa6.45□□□□□ -1.38
Ptpre-204ENSMUST00000209979 1110002E22RikE0CYV9 1786 aa6.44□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Ighv8-13A0A075B5Y0 101 aa6.44□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Tet1Q3URK3 2007 aaKnown RBP6.44□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Gm43218A0A0G2JGT0 114 aa6.44□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Coa5Q99M07 74 aa6.44□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Notch4P31695 1964 aa6.43□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Med13lQ6JPI3 2207 aa6.43□□□□□ -1.38
Ptpre-204ENSMUST00000209979 RetnlbQ99P86 105 aa6.42□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Cd164l2Q9D6W7 172 aa6.42□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Gm21886J3QJU9 214 aa6.42□□□□□ -1.38
Ptpre-204ENSMUST00000209979 Pla2g2cP48076 150 aa6.42□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms