RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Trbv13-2A0A140T8N6 113 aa7.48□□□□□ -1.21
Pcdh20-202ENSMUST00000192557 Gm11444F6QMA6 170 aa7.48□□□□□ -1.21
Pcdh20-202ENSMUST00000192557 E130114P18RikF6S0S7 154 aa7.48□□□□□ -1.21
Pcdh20-202ENSMUST00000192557 Spink4O35679 86 aa7.48□□□□□ -1.21
Pcdh20-202ENSMUST00000192557 Atp5g3P56384 141 aa7.48□□□□□ -1.21
Pcdh20-202ENSMUST00000192557 Atp5g1Q9CR84 136 aa7.48□□□□□ -1.21
Pcdh20-202ENSMUST00000192557 Spry2Q9QXV8 315 aa7.48□□□□□ -1.21
Pcdh20-202ENSMUST00000192557 Gm4861Q8C5A4 106 aa7.47□□□□□ -1.21
Pcdh20-202ENSMUST00000192557 Cox8cA6H666 72 aa7.47□□□□□ -1.21
Pcdh20-202ENSMUST00000192557 4930432M17RikQ3V0W9 174 aa7.47□□□□□ -1.21
Pcdh20-202ENSMUST00000192557 Trav11A0A0B4J1J9 114 aa7.46□□□□□ -1.21
Pcdh20-202ENSMUST00000192557 Rpl13aP19253 203 aaKnown RBP7.46□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Defb47Q30KN1 79 aa7.46□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Morn5Q9DAI9 170 aa7.46□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 B230359F08RikA0A0B4J1K3 109 aa7.45□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 4930546C10RikE9Q4Y3 121 aa7.45□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Trav7-6A0A075B640 112 aa7.45□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Prss58Q8BW11 241 aa7.45□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Pfn2Q9JJV2 140 aa7.45□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 FasnP19096 2504 aaKnown RBP7.45□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Defb10Q8R2I8 73 aa7.45□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Klk11Q9QYN3 276 aa7.45□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Cmc4Q61908 68 aa7.44□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 MobpQ9D2P8 170 aa7.44□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Cryba4Q9JJV0 196 aa7.44□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Glrp1E9Q9S8 174 aa7.43□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Sslp1Q3UN54 99 aa7.43□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Igkv6-13A0A0G2JGY3 119 aa7.43□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Foxc1Q61572 553 aa7.43□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Tac4Q99N14 128 aa7.43□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Ighv8-5A0A0A6YY60 119 aa7.43□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Smr3aQ61900 147 aa7.43□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 2310009B15RikA0A0A6YWI4 143 aa7.42□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 P01755 137 aa7.42□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Cks1bP61025 79 aa7.42□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Stab2Q8R4U0 2559 aa7.42□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 CirbpP60824 172 aaKnown RBP7.41□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Odf3l2Q3TZ65 277 aa7.41□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Ly6gP35461 111 aa7.41□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Phxr5P08399 672 aa7.4□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Sostdc1Q9CQN4 206 aa7.4□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Cdip1Q9DB75 208 aa7.4□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Gm29423A0A087WRM1 55 aa7.4□□□□□ -1.22
Pcdh20-202ENSMUST00000192557 Igkv3-9A0A140T8P4 119 aa7.4□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 1700011M02RikB1AX35 88 aa7.4□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Eif4ebp3Q80VV3 101 aa7.4□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Anapc13Q8R034 74 aa7.4□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 NpwA0A1L1STR8 176 aa7.39□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Gm3618D3Z4P5 127 aa7.39□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Gm43218A0A0G2JGT0 114 aa7.39□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 2010109I03RikQ9CQ11 111 aa7.39□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Trav9n-4A0A075B631 113 aa7.38□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Zfp951A0A087WRH0 451 aa7.38□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Ighv13-2A0A0A6YWN3 119 aa7.38□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Igkv3-1A0A075B5P1 119 aa7.38□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Igkv8-34A0A0G2JDU0 121 aa7.38□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Gm10647E9Q8X0 124 aa7.38□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Gatd1Q8BFQ8 220 aa7.38□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Gm9936Q8C864 160 aa7.38□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 4930442H23RikQ9D5G7 103 aa7.37□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Ly6hQ9WUC3 139 aa7.37□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Trav13-1A0A075B644 110 aa7.37□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Zfand2aQ9JII7 171 aa7.37□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Rpl32-psP17932 135 aa7.37□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 9430069I07RikQ9CX21 111 aa7.37□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Ighv8-11A0A075B5X4 119 aa7.36□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Defa20Q45VN2 95 aa7.36□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 1700010B08RikQ9DAI7 102 aa7.36□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Gm10135F6TEE5 83 aa7.36□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Q9DAQ5 155 aa7.36□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Trav13-2A0A075B649 110 aa7.35□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Krtap11-1E9Q2E9 183 aa7.35□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Dnah14A0A140LIJ4 4489 aa7.35□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Trav4-3A0A0B4J1K1 110 aa7.34□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Defa2P28309 93 aa7.34□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Reg3bP35230 175 aa7.34□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Defb50Q6TU36 73 aa7.34□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 MrapQ9D159 127 aa7.34□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 1700020N15RikL7MTX3 112 aa7.34□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Lst1O08843 95 aa7.34□□□□□ -1.23
Pcdh20-202ENSMUST00000192557 Gm6793B2RXM2 351 aa7.33□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Smim20D3Z7Q2 69 aa7.33□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 BB014433Q8C5R5 389 aa7.33□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Prr13Q9CQJ5 137 aa7.33□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Lyrm7Q9DA03 104 aa7.33□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Phpt1Q9DAK9 124 aa7.33□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Lgals4Q8K419 326 aa7.33□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Ss18l2Q9D174 77 aa7.33□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Wfdc12Q9JHY3 85 aa7.33□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Timm17bQ9Z0V7 172 aa7.33□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Ighv8-13A0A075B5Y0 101 aa7.32□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Igkv8-24A0A140T8P5 121 aa7.32□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Gm9508A0A1W2P7W0 230 aa7.32□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Snhg11Q4G0K9 87 aa7.32□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 FcgbpE9Q0B5 2583 aa7.32□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 6430550D23RikE9Q1X6 194 aa7.32□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Ndufa12Q7TMF3 145 aaKnown RBP7.32□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Tmem223Q9CQE2 199 aaKnown RBP7.32□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 MifP34884 115 aaKnown RBP7.31□□□□□ -1.24
Pcdh20-202ENSMUST00000192557 Trav4d-3A0A075B625 110 aa7.31□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 72.3 ms