RNA–Protein interactions for RNA: ENSMUST00000175898.3

Six3-202, Transcript of Homeobox protein SIX3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Six3, Length 2,419 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Six3-202ENSMUST00000175898 Prp2P05143 317 aa19.09■□□□□ 0.65
Six3-202ENSMUST00000175898 Ifitm6A0A1B0GS75 124 aa19.09■□□□□ 0.65
Six3-202ENSMUST00000175898 Defa7P50705 93 aa19.08■□□□□ 0.64
Six3-202ENSMUST00000175898 Tep1P97499 2629 aa19.08■□□□□ 0.64
Six3-202ENSMUST00000175898 P01755 137 aa19.08■□□□□ 0.64
Six3-202ENSMUST00000175898 Zfyve26Q5DU37 2529 aa19.07■□□□□ 0.64
Six3-202ENSMUST00000175898 Ccl21aP84444 133 aa19.06■□□□□ 0.64
Six3-202ENSMUST00000175898 Ccl21bP86792 133 aa19.06■□□□□ 0.64
Six3-202ENSMUST00000175898 Ccl21cP86793 133 aa19.06■□□□□ 0.64
Six3-202ENSMUST00000175898 Igkv1-99F6XWB2 120 aa19.05■□□□□ 0.64
Six3-202ENSMUST00000175898 Tmem254aP0DN89 123 aa19.04■□□□□ 0.64
Six3-202ENSMUST00000175898 Tmem254bP0DN90 123 aa19.04■□□□□ 0.64
Six3-202ENSMUST00000175898 Tmem254cP0DN91 123 aa19.04■□□□□ 0.64
Six3-202ENSMUST00000175898 Gm9913Q8BQQ2 135 aa19.04■□□□□ 0.64
Six3-202ENSMUST00000175898 Defa21Q8C1P2 93 aa19.04■□□□□ 0.64
Six3-202ENSMUST00000175898 Srsf12Q8C8K3 266 aa19.04■□□□□ 0.64
Six3-202ENSMUST00000175898 MobpQ9D2P8 170 aa19.04■□□□□ 0.64
Six3-202ENSMUST00000175898 Gm19935A0A1B0GSF9 52 aa19.03■□□□□ 0.64
Six3-202ENSMUST00000175898 Smim26Q3V460 107 aa19.03■□□□□ 0.64
Six3-202ENSMUST00000175898 Crlf1Q9JM58 425 aa19.03■□□□□ 0.64
Six3-202ENSMUST00000175898 MifP34884 115 aaKnown RBP19.02■□□□□ 0.64
Six3-202ENSMUST00000175898 Defb42Q8BVB5 75 aa19.02■□□□□ 0.64
Six3-202ENSMUST00000175898 Celsr2Q9R0M0 2920 aa19.01■□□□□ 0.63
Six3-202ENSMUST00000175898 B230359F08RikA0A0B4J1K3 109 aa19.01■□□□□ 0.63
Six3-202ENSMUST00000175898 Tmem243B2RVB9 118 aa19.01■□□□□ 0.63
Six3-202ENSMUST00000175898 Gm10772F7AIG4 85 aa19.01■□□□□ 0.63
Six3-202ENSMUST00000175898 Gm7102J3QQ10 178 aa19.01■□□□□ 0.63
Six3-202ENSMUST00000175898 Mrpl52Q9D0Y8 121 aa19.01■□□□□ 0.63
Six3-202ENSMUST00000175898 Trav9d-3A0A075B695 113 aa19■□□□□ 0.63
Six3-202ENSMUST00000175898 Zfp951A0A087WRH0 451 aa19■□□□□ 0.63
Six3-202ENSMUST00000175898 Samd13D3YUG0 102 aa19■□□□□ 0.63
Six3-202ENSMUST00000175898 Bahcc1Q3UHR0 2643 aa18.99■□□□□ 0.63
Six3-202ENSMUST00000175898 Nop10Q9CQS2 64 aa18.99■□□□□ 0.63
Six3-202ENSMUST00000175898 Smlr1J3QMJ4 66 aa18.98■□□□□ 0.63
Six3-202ENSMUST00000175898 Usp9xP70398 2559 aaKnown RBP18.98■□□□□ 0.63
Six3-202ENSMUST00000175898 Trav13n-2A0A0G2JF93 110 aa18.97■□□□□ 0.63
Six3-202ENSMUST00000175898 Gm5142Q8C5X9 133 aa18.97■□□□□ 0.63
Six3-202ENSMUST00000175898 Naa38Q9D2U5 125 aa18.97■□□□□ 0.63
Six3-202ENSMUST00000175898 Gcn1E9PVA8 2671 aaKnown RBP18.97■□□□□ 0.63
Six3-202ENSMUST00000175898 Ighv1-49A0A0A6YWX2 117 aa18.96■□□□□ 0.63
Six3-202ENSMUST00000175898 Trav13d-4A0A0G2JFX3 110 aa18.95■□□□□ 0.62
Six3-202ENSMUST00000175898 Lypd5Q9D7Z7 256 aa18.95■□□□□ 0.62
Six3-202ENSMUST00000175898 Chchd7Q8K2Q5 85 aa18.95■□□□□ 0.62
Six3-202ENSMUST00000175898 Gm8439G3UWA7 96 aa18.94■□□□□ 0.62
Six3-202ENSMUST00000175898 PrlhG3UWC3 86 aa18.94■□□□□ 0.62
Six3-202ENSMUST00000175898 Ube2d4D3YUH6 135 aa18.93■□□□□ 0.62
Six3-202ENSMUST00000175898 Gm10845Q3UNY9 185 aa18.93■□□□□ 0.62
Six3-202ENSMUST00000175898 Tmem223Q9CQE2 199 aaKnown RBP18.92■□□□□ 0.62
Six3-202ENSMUST00000175898 Tmem86bQ497J1 226 aa18.91■□□□□ 0.62
Six3-202ENSMUST00000175898 Q9DAA7 145 aa18.91■□□□□ 0.62
Six3-202ENSMUST00000175898 Rpl39lQ9CQD0 51 aa18.9■□□□□ 0.62
Six3-202ENSMUST00000175898 Trav13-1A0A075B644 110 aa18.9■□□□□ 0.62
Six3-202ENSMUST00000175898 Gm7075D3Z497 112 aa18.9■□□□□ 0.62
Six3-202ENSMUST00000175898 GhrhP16043 103 aa18.9■□□□□ 0.62
Six3-202ENSMUST00000175898 Cox7a1P56392 80 aa18.89■□□□□ 0.61
Six3-202ENSMUST00000175898 Igkv4-72A0A0B4J1I4 117 aa18.89■□□□□ 0.61
Six3-202ENSMUST00000175898 Gpha2Q925Q5 128 aa18.88■□□□□ 0.61
Six3-202ENSMUST00000175898 Gm10308Q9CVR5 141 aa18.88■□□□□ 0.61
Six3-202ENSMUST00000175898 Krtap16-1A2A5X5 502 aa18.88■□□□□ 0.61
Six3-202ENSMUST00000175898 E130208F15RikQ3UPV3 143 aa18.88■□□□□ 0.61
Six3-202ENSMUST00000175898 Bles03Q8VD62 251 aa18.85■□□□□ 0.61
Six3-202ENSMUST00000175898 Col7a1Q63870 2944 aa18.85■□□□□ 0.61
Six3-202ENSMUST00000175898 Helz2E9QAM5 2947 aaKnown RBP18.84■□□□□ 0.61
Six3-202ENSMUST00000175898 Ighv10-3A0A075B5T6 119 aa18.83■□□□□ 0.6
Six3-202ENSMUST00000175898 Igkv8-21A0A140T8P7 120 aa18.82■□□□□ 0.6
Six3-202ENSMUST00000175898 9430015G10RikA2ASP7 199 aa18.82■□□□□ 0.6
Six3-202ENSMUST00000175898 Rnase1P00683 149 aa18.82■□□□□ 0.6
Six3-202ENSMUST00000175898 Tcl1b3P56842 122 aa18.82■□□□□ 0.6
Six3-202ENSMUST00000175898 Ighv1-59A0A0A6YXE0 117 aa18.81■□□□□ 0.6
Six3-202ENSMUST00000175898 H2al1aQ5M8Q2 105 aa18.81■□□□□ 0.6
Six3-202ENSMUST00000175898 Ormdl1Q921I0 153 aa18.81■□□□□ 0.6
Six3-202ENSMUST00000175898 Gm43218A0A0G2JGT0 114 aa18.81■□□□□ 0.6
Six3-202ENSMUST00000175898 Fam19a1Q7TPG8 133 aa18.81■□□□□ 0.6
Six3-202ENSMUST00000175898 Fam19a5Q91WE9 132 aa18.8■□□□□ 0.6
Six3-202ENSMUST00000175898 4930535I16RikQ9CUI2 172 aa18.8■□□□□ 0.6
Six3-202ENSMUST00000175898 Gm5153P01627 120 aa18.79■□□□□ 0.6
Six3-202ENSMUST00000175898 EnhoQ8K1D8 76 aa18.79■□□□□ 0.6
Six3-202ENSMUST00000175898 Ighv2-9A0A075B5Q5 116 aa18.79■□□□□ 0.6
Six3-202ENSMUST00000175898 Igkv8-18A0A0B4J1J3 123 aa18.79■□□□□ 0.6
Six3-202ENSMUST00000175898 Gm9903Q8C9Y8 129 aa18.79■□□□□ 0.6
Six3-202ENSMUST00000175898 Tomm7Q9D173 55 aa18.78■□□□□ 0.6
Six3-202ENSMUST00000175898 Defa23Q5G866 93 aa18.78■□□□□ 0.6
Six3-202ENSMUST00000175898 Sprr1bQ62267 153 aa18.77■□□□□ 0.6
Six3-202ENSMUST00000175898 Nav3Q80TN7 2359 aa18.76■□□□□ 0.59
Six3-202ENSMUST00000175898 Igkv2-109A0A075B5K6 120 aa18.76■□□□□ 0.59
Six3-202ENSMUST00000175898 Ubl5Q9EPV8 73 aa18.75■□□□□ 0.59
Six3-202ENSMUST00000175898 Inafm2A0A1L1STD6 152 aa18.73■□□□□ 0.59
Six3-202ENSMUST00000175898 P01819 144 aa18.73■□□□□ 0.59
Six3-202ENSMUST00000175898 Defb2P82020 71 aa18.73■□□□□ 0.59
Six3-202ENSMUST00000175898 Nf1Q04690 2841 aa18.73■□□□□ 0.59
Six3-202ENSMUST00000175898 Odf3l2Q3TZ65 277 aa18.7■□□□□ 0.58
Six3-202ENSMUST00000175898 Ighv13-2A0A0A6YWN3 119 aa18.7■□□□□ 0.58
Six3-202ENSMUST00000175898 Gm7257D3YX25 99 aa18.69■□□□□ 0.58
Six3-202ENSMUST00000175898 Igkv8-27A0A0G2JF28 120 aa18.69■□□□□ 0.58
Six3-202ENSMUST00000175898 Igkv8-30A0A140T8M3 121 aa18.69■□□□□ 0.58
Six3-202ENSMUST00000175898 B230307C23RikQ8BLB2 64 aa18.69■□□□□ 0.58
Six3-202ENSMUST00000175898 Ankrd17Q99NH0 2603 aaKnown RBP18.68■□□□□ 0.58
Six3-202ENSMUST00000175898 Spink4O35679 86 aa18.68■□□□□ 0.58
Six3-202ENSMUST00000175898 CnbpP53996 178 aaKnown RBP18.68■□□□□ 0.58
Six3-202ENSMUST00000175898 CubnQ9JLB4 3623 aa18.67■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms