RNA–Protein interactions for RNA: ENSMUST00000175898.3

Six3-202, Transcript of Homeobox protein SIX3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Six3, Length 2,419 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Six3-202ENSMUST00000175898 NischQ80TM9 1593 aa49.75■■■■■ 5.55
Six3-202ENSMUST00000175898 Gm35339A0A140LHH9 1649 aa49.03■■■■■ 5.44
Six3-202ENSMUST00000175898 Abcc9P70170 1546 aa48.27■■■■■ 5.32
Six3-202ENSMUST00000175898 Abcc8B2RUS7 1588 aa47.38■■■■■ 5.17
Six3-202ENSMUST00000175898 Rtl1Q7M732 1744 aa47.18■■■■■ 5.14
Six3-202ENSMUST00000175898 Ccdc180J3QNE4 1664 aa46.57■■■■■ 5.04
Six3-202ENSMUST00000175898 Rhox8Q6VSS7 320 aa46.53■■■■■ 5.04
Six3-202ENSMUST00000175898 Rpgrip1Q9EPQ2 1331 aa46.45■■■■■ 5.03
Six3-202ENSMUST00000175898 Zcchc6Q5BLK4 1491 aaKnown RBP45.15■■■■■ 4.82
Six3-202ENSMUST00000175898 Acin1Q9JIX8 1338 aaKnown RBP45.1■■■■■ 4.81
Six3-202ENSMUST00000175898 ScribQ80U72 1612 aa44.37■■■■■ 4.69
Six3-202ENSMUST00000175898 Dcaf1Q80TR8 1506 aa44.27■■■■■ 4.68
Six3-202ENSMUST00000175898 HrcG5E8J6 738 aa44.19■■■■■ 4.66
Six3-202ENSMUST00000175898 Pcgf6Q99NA9 353 aa43.91■■■■■ 4.62
Six3-202ENSMUST00000175898 Ehmt2Q9Z148 1263 aaKnown RBP43.91■■■■■ 4.62
Six3-202ENSMUST00000175898 Rb1cc1Q9ESK9 1588 aa43.55■■■■■ 4.56
Six3-202ENSMUST00000175898 Kdm5dQ62240 1548 aa43.47■■■■■ 4.55
Six3-202ENSMUST00000175898 NacadQ5SWP3 1504 aa43.16■■■■■ 4.5
Six3-202ENSMUST00000175898 Trim41Q5NCC3 630 aa43.05■■■■■ 4.48
Six3-202ENSMUST00000175898 Baz1aO88379 1555 aa43.01■■■■■ 4.48
Six3-202ENSMUST00000175898 Ccdc136Q3TVA9 1136 aa43■■■■■ 4.47
Six3-202ENSMUST00000175898 Supt5hO55201 1082 aaKnown RBP42.77■■■■■ 4.44
Six3-202ENSMUST00000175898 Cep164Q5DU05 1446 aa42.5■■■■■ 4.39
Six3-202ENSMUST00000175898 Crybg2B7ZCC2 1516 aa42.3■■■■■ 4.36
Six3-202ENSMUST00000175898 Neurod1Q60867 357 aa42.25■■■■■ 4.35
Six3-202ENSMUST00000175898 Sycp2Q9CUU3 1500 aa42.25■■■■■ 4.35
Six3-202ENSMUST00000175898 Smarca2Q6DIC0 1577 aa42.01■■■■■ 4.32
Six3-202ENSMUST00000175898 Las1lA2BE28 776 aaKnown RBP41.78■■■■■ 4.28
Six3-202ENSMUST00000175898 NefmP08553 848 aa41.77■■■■■ 4.28
Six3-202ENSMUST00000175898 Zeb1Q64318 1117 aa41.65■■■■■ 4.26
Six3-202ENSMUST00000175898 Cngb1E1AZ71 1325 aa41.46■■■■■ 4.23
Six3-202ENSMUST00000175898 Rsf1E9PWW9 1441 aaKnown RBP41.44■■■■■ 4.22
Six3-202ENSMUST00000175898 Mier1Q5UAK0 511 aa41.38■■■■■ 4.22
Six3-202ENSMUST00000175898 BicraF8VPZ9 1578 aa41.38■■■■■ 4.21
Six3-202ENSMUST00000175898 Sall2Q9QX96 1004 aa41.37■■■■■ 4.21
Six3-202ENSMUST00000175898 Chic1Q8CBW7 227 aa41.3■■■■■ 4.2
Six3-202ENSMUST00000175898 Anks4bQ8K3X6 423 aa41.25■■■■■ 4.19
Six3-202ENSMUST00000175898 Cecr2E9Q2Z1 1453 aa41.22■■■■■ 4.19
Six3-202ENSMUST00000175898 Gab3Q8BSM5 595 aa41.15■■■■■ 4.18
Six3-202ENSMUST00000175898 1700123L14RikQ3V2K7 440 aa41.05■■■■■ 4.16
Six3-202ENSMUST00000175898 Brd4Q9ESU6 1400 aaKnown RBP41■■■■■ 4.15
Six3-202ENSMUST00000175898 Ccdc88bQ4QRL3 1481 aa40.96■■■■■ 4.15
Six3-202ENSMUST00000175898 Csrnp3P59055 597 aa40.83■■■■■ 4.13
Six3-202ENSMUST00000175898 Golga3P55937 1487 aa40.82■■■■■ 4.13
Six3-202ENSMUST00000175898 Synj1Q8CHC4 1574 aa40.73■■■■■ 4.11
Six3-202ENSMUST00000175898 CftrP26361 1476 aa40.53■■■■■ 4.08
Six3-202ENSMUST00000175898 Aplp2Q06335 707 aa40.51■■■■■ 4.07
Six3-202ENSMUST00000175898 Myt1Q8CFC2 1127 aa40.49■■■■■ 4.07
Six3-202ENSMUST00000175898 Aebp2Q9Z248 504 aaKnown RBP40.48■■■■■ 4.07
Six3-202ENSMUST00000175898 Cdk11bP24788 784 aaKnown RBP40.47■■■■■ 4.07
Six3-202ENSMUST00000175898 Wdr66E9Q743 1299 aa40.44■■■■■ 4.06
Six3-202ENSMUST00000175898 ClspnQ80YR7 1315 aa40.43■■■■■ 4.06
Six3-202ENSMUST00000175898 Nop58Q6DFW4 536 aaKnown RBP40.36■■■■■ 4.05
Six3-202ENSMUST00000175898 Smarca4Q3TKT4 1613 aaKnown RBP40.31■■■■■ 4.04
Six3-202ENSMUST00000175898 CenpbP27790 599 aa40.31■■■■■ 4.04
Six3-202ENSMUST00000175898 Esf1Q3V1V3 845 aaKnown RBP40.31■■■■■ 4.04
Six3-202ENSMUST00000175898 Cttnbp2B9EJA2 1648 aa40.25■■■■■ 4.03
Six3-202ENSMUST00000175898 Top2bQ64511 1612 aa40.21■■■■■ 4.03
Six3-202ENSMUST00000175898 UbtfP25976 765 aaKnown RBP40.21■■■■■ 4.03
Six3-202ENSMUST00000175898 Rapgef2Q8CHG7 1496 aa40.04■■■■■ 4
Six3-202ENSMUST00000175898 TonslQ6NZL6 1363 aa39.87■■■■□ 3.97
Six3-202ENSMUST00000175898 Iqgap2Q3UQ44 1575 aa39.83■■■■□ 3.97
Six3-202ENSMUST00000175898 Ppargc1bQ8VHJ7 1014 aa39.73■■■■□ 3.95
Six3-202ENSMUST00000175898 Atad2bE9Q166 1460 aaKnown RBP39.73■■■■□ 3.95
Six3-202ENSMUST00000175898 Cc2d2aQ8CFW7 1633 aa39.72■■■■□ 3.95
Six3-202ENSMUST00000175898 Cep162Q6ZQ06 1403 aa39.65■■■■□ 3.94
Six3-202ENSMUST00000175898 Pds5bQ4VA53 1446 aaKnown RBP39.6■■■■□ 3.93
Six3-202ENSMUST00000175898 Top2aQ01320 1528 aaKnown RBP39.58■■■■□ 3.93
Six3-202ENSMUST00000175898 Fmn1Q05860 1466 aa39.51■■■■□ 3.92
Six3-202ENSMUST00000175898 Gm38655A0A286YDK6 273 aa39.51■■■■□ 3.91
Six3-202ENSMUST00000175898 Ncapd3Q6ZQK0 1506 aa39.44■■■■□ 3.9
Six3-202ENSMUST00000175898 Myt1lP97500 1187 aa39.34■■■■□ 3.89
Six3-202ENSMUST00000175898 Clip1Q922J3 1391 aa39.25■■■■□ 3.87
Six3-202ENSMUST00000175898 Tnnt3Q9QZ47 272 aa39.23■■■■□ 3.87
Six3-202ENSMUST00000175898 Eif4g1Q6NZJ6 1600 aaKnown RBP39.22■■■■□ 3.87
Six3-202ENSMUST00000175898 Frmpd1A2AKB4 1549 aa39.14■■■■□ 3.86
Six3-202ENSMUST00000175898 Plekhg3Q4VAC9 1341 aa39.13■■■■□ 3.85
Six3-202ENSMUST00000175898 Wdr62Q3U3T8 1523 aa39.08■■■■□ 3.85
Six3-202ENSMUST00000175898 Hnrnpul2Q00PI9 745 aaKnown RBP39.08■■■■□ 3.85
Six3-202ENSMUST00000175898 Fam71e1A1L3C1 212 aa39.01■■■■□ 3.83
Six3-202ENSMUST00000175898 Npm2Q80W85 207 aa38.99■■■■□ 3.83
Six3-202ENSMUST00000175898 Kdm5bQ80Y84 1544 aa38.97■■■■□ 3.83
Six3-202ENSMUST00000175898 SafbD3YXK2 937 aaKnown RBP38.91■■■■□ 3.82
Six3-202ENSMUST00000175898 TnnQ80Z71 1560 aa38.89■■■■□ 3.82
Six3-202ENSMUST00000175898 Ercc6F8VPZ5 1481 aa38.86■■■■□ 3.81
Six3-202ENSMUST00000175898 DiexfQ8BTT6 772 aaKnown RBP38.8■■■■□ 3.8
Six3-202ENSMUST00000175898 Mapk8ip2Q9ERE9 830 aa38.76■■■■□ 3.8
Six3-202ENSMUST00000175898 Lamc3Q9R0B6 1581 aa38.68■■■■□ 3.78
Six3-202ENSMUST00000175898 Eid3Q3V124 375 aa38.68■■■■□ 3.78
Six3-202ENSMUST00000175898 Arap1Q4LDD4 1452 aa38.67■■■■□ 3.78
Six3-202ENSMUST00000175898 Arhgap35Q91YM2 1499 aa38.64■■■■□ 3.78
Six3-202ENSMUST00000175898 Ap3b1Q9Z1T1 1105 aa38.64■■■■□ 3.78
Six3-202ENSMUST00000175898 Unc13aQ4KUS2 1712 aa38.63■■■■□ 3.77
Six3-202ENSMUST00000175898 Kif15Q6P9L6 1387 aa38.63■■■■□ 3.77
Six3-202ENSMUST00000175898 Eea1Q8BL66 1411 aa38.63■■■■□ 3.77
Six3-202ENSMUST00000175898 Ccdc18Q640L5 1455 aa38.61■■■■□ 3.77
Six3-202ENSMUST00000175898 Bcl11aQ9QYE3 773 aa38.61■■■■□ 3.77
Six3-202ENSMUST00000175898 TchhA0A0B4J1F9 1599 aa38.59■■■■□ 3.77
Six3-202ENSMUST00000175898 Znf710Q3U288 666 aa38.59■■■■□ 3.77
Six3-202ENSMUST00000175898 Rpap1Q80TE0 1409 aa38.58■■■■□ 3.77
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms