RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Cmya5Q70KF4 3739 aa4.45□□□□□ -1.7
Lig4-202ENSMUST00000170033 Trbv13-1A0A0B4J1P8 112 aa4.45□□□□□ -1.7
Lig4-202ENSMUST00000170033 Gm19935A0A1B0GSF9 52 aa4.45□□□□□ -1.7
Lig4-202ENSMUST00000170033 Tcl1b3P56842 122 aa4.45□□□□□ -1.7
Lig4-202ENSMUST00000170033 Pkd1l2Q7TN88 2461 aa4.45□□□□□ -1.7
Lig4-202ENSMUST00000170033 Gm9195A0A140LHT4 2805 aa4.45□□□□□ -1.7
Lig4-202ENSMUST00000170033 Ighv8-11A0A075B5X4 119 aa4.44□□□□□ -1.7
Lig4-202ENSMUST00000170033 Gm10542F6XDR3 90 aa4.44□□□□□ -1.7
Lig4-202ENSMUST00000170033 MifP34884 115 aaKnown RBP4.44□□□□□ -1.7
Lig4-202ENSMUST00000170033 Gm10549Q3URY4 149 aa4.44□□□□□ -1.7
Lig4-202ENSMUST00000170033 Fam229bQ8CF36 80 aa4.44□□□□□ -1.7
Lig4-202ENSMUST00000170033 Spata3Q9D9T6 193 aa4.44□□□□□ -1.7
Lig4-202ENSMUST00000170033 Acyp1P56376 99 aa4.44□□□□□ -1.7
Lig4-202ENSMUST00000170033 Glrp1E9Q9S8 174 aa4.43□□□□□ -1.7
Lig4-202ENSMUST00000170033 Igkv4-78A0A0A6YYE5 119 aa4.43□□□□□ -1.7
Lig4-202ENSMUST00000170033 Igkv3-12A0A140T8P0 119 aa4.43□□□□□ -1.7
Lig4-202ENSMUST00000170033 Lelp1Q9DAE3 120 aa4.43□□□□□ -1.7
Lig4-202ENSMUST00000170033 Ndufs7Q9DC70 224 aa4.43□□□□□ -1.7
Lig4-202ENSMUST00000170033 Itpr3P70227 2670 aa4.43□□□□□ -1.7
Lig4-202ENSMUST00000170033 Dmbt1Q60997 2085 aa4.43□□□□□ -1.7
Lig4-202ENSMUST00000170033 Cdc42se2Q8BGH7 84 aa4.43□□□□□ -1.7
Lig4-202ENSMUST00000170033 Gm29666A0A087WQ99 126 aa4.42□□□□□ -1.7
Lig4-202ENSMUST00000170033 Gm35549A0A0N4SUS7 141 aa4.42□□□□□ -1.7
Lig4-202ENSMUST00000170033 4930519P11RikQ9CUJ8 166 aa4.42□□□□□ -1.7
Lig4-202ENSMUST00000170033 HampQ9EQ21 83 aa4.42□□□□□ -1.7
Lig4-202ENSMUST00000170033 Sptbn1Q62261 2363 aaKnown RBP4.42□□□□□ -1.7
Lig4-202ENSMUST00000170033 Gm5153P01627 120 aa4.42□□□□□ -1.7
Lig4-202ENSMUST00000170033 Tcl1b5P56845 121 aa4.42□□□□□ -1.7
Lig4-202ENSMUST00000170033 Rif1Q6PR54 2419 aaKnown RBP4.41□□□□□ -1.7
Lig4-202ENSMUST00000170033 Ighv1-62-1A0A075B5U3 116 aa4.41□□□□□ -1.7
Lig4-202ENSMUST00000170033 Ighv10-1A0A0B4J1J6 119 aa4.41□□□□□ -1.7
Lig4-202ENSMUST00000170033 Spink4O35679 86 aa4.41□□□□□ -1.7
Lig4-202ENSMUST00000170033 Tmem223Q9CQE2 199 aaKnown RBP4.41□□□□□ -1.7
Lig4-202ENSMUST00000170033 Sprr1bQ62267 153 aa4.41□□□□□ -1.7
Lig4-202ENSMUST00000170033 MplkipQ9D011 178 aa4.41□□□□□ -1.7
Lig4-202ENSMUST00000170033 Prrc2cQ3TLH4 2846 aaKnown RBP4.41□□□□□ -1.7
Lig4-202ENSMUST00000170033 Rpl28P41105 137 aaKnown RBP4.41□□□□□ -1.7
Lig4-202ENSMUST00000170033 Rpl18aP62717 176 aaKnown RBP4.41□□□□□ -1.7
Lig4-202ENSMUST00000170033 Serp2Q6TAW2 65 aa4.41□□□□□ -1.7
Lig4-202ENSMUST00000170033 Lypd5Q9D7Z7 256 aa4.41□□□□□ -1.7
Lig4-202ENSMUST00000170033 Tfpi2O35536 230 aa4.4□□□□□ -1.7
Lig4-202ENSMUST00000170033 P01745 121 aa4.4□□□□□ -1.7
Lig4-202ENSMUST00000170033 Plac8l1Q08EJ0 177 aa4.4□□□□□ -1.7
Lig4-202ENSMUST00000170033 Igkv4-72A0A0B4J1I4 117 aa4.4□□□□□ -1.71
Lig4-202ENSMUST00000170033 Obox2E9PXV9 151 aa4.4□□□□□ -1.71
Lig4-202ENSMUST00000170033 OdaphJ3QNT8 126 aa4.4□□□□□ -1.71
Lig4-202ENSMUST00000170033 CnbpP53996 178 aaKnown RBP4.4□□□□□ -1.71
Lig4-202ENSMUST00000170033 1700012A03RikQ9DAF1 130 aa4.4□□□□□ -1.71
Lig4-202ENSMUST00000170033 Spg11Q3UHA3 2430 aa4.4□□□□□ -1.71
Lig4-202ENSMUST00000170033 Ighv2-9-1A0A075B697 116 aa4.39□□□□□ -1.71
Lig4-202ENSMUST00000170033 MobpQ9D2P8 170 aa4.39□□□□□ -1.71
Lig4-202ENSMUST00000170033 Trav9n-2A0A0G2JDP3 113 aa4.39□□□□□ -1.71
Lig4-202ENSMUST00000170033 AngP21570 145 aa4.39□□□□□ -1.71
Lig4-202ENSMUST00000170033 Gpha2Q925Q5 128 aa4.39□□□□□ -1.71
Lig4-202ENSMUST00000170033 4930535I16RikQ9CUI2 172 aa4.39□□□□□ -1.71
Lig4-202ENSMUST00000170033 Ankhd1E9PUR0 2548 aaKnown RBP4.39□□□□□ -1.71
Lig4-202ENSMUST00000170033 Rbm3O89086 153 aaKnown RBP4.39□□□□□ -1.71
Lig4-202ENSMUST00000170033 P01823 113 aa4.39□□□□□ -1.71
Lig4-202ENSMUST00000170033 SpinklQ8CEK3 90 aa4.39□□□□□ -1.71
Lig4-202ENSMUST00000170033 Spint4Q9D263 159 aa4.39□□□□□ -1.71
Lig4-202ENSMUST00000170033 Trav11A0A0B4J1J9 114 aa4.38□□□□□ -1.71
Lig4-202ENSMUST00000170033 Spag11Q8K4N2 71 aa4.38□□□□□ -1.71
Lig4-202ENSMUST00000170033 Zfand2aQ9JII7 171 aa4.38□□□□□ -1.71
Lig4-202ENSMUST00000170033 Phpt1Q9DAK9 124 aa4.38□□□□□ -1.71
Lig4-202ENSMUST00000170033 Igkv4-79A0A075B5L8 119 aa4.37□□□□□ -1.71
Lig4-202ENSMUST00000170033 Sptan1P16546 2472 aaKnown RBP4.37□□□□□ -1.71
Lig4-202ENSMUST00000170033 Gm10772F7AIG4 85 aa4.37□□□□□ -1.71
Lig4-202ENSMUST00000170033 Lst1O08843 95 aa4.37□□□□□ -1.71
Lig4-202ENSMUST00000170033 Rmi2Q3UPE3 149 aa4.37□□□□□ -1.71
Lig4-202ENSMUST00000170033 Smim26Q3V460 107 aa4.37□□□□□ -1.71
Lig4-202ENSMUST00000170033 B230307C23RikQ8BLB2 64 aa4.37□□□□□ -1.71
Lig4-202ENSMUST00000170033 4930415O20RikQ8CDT5 131 aa4.37□□□□□ -1.71
Lig4-202ENSMUST00000170033 GhrhP16043 103 aa4.37□□□□□ -1.71
Lig4-202ENSMUST00000170033 Gm9903Q8C9Y8 129 aa4.37□□□□□ -1.71
Lig4-202ENSMUST00000170033 Fgf23Q9EPC2 251 aa4.37□□□□□ -1.71
Lig4-202ENSMUST00000170033 LystP97412 3788 aa4.36□□□□□ -1.71
Lig4-202ENSMUST00000170033 Ighv10-3A0A075B5T6 119 aa4.36□□□□□ -1.71
Lig4-202ENSMUST00000170033 Sslp1Q3UN54 99 aa4.36□□□□□ -1.71
Lig4-202ENSMUST00000170033 Ighv1-56A0A0A6YXG2 117 aa4.36□□□□□ -1.71
Lig4-202ENSMUST00000170033 Lrrk2Q5S006 2527 aa4.36□□□□□ -1.71
Lig4-202ENSMUST00000170033 Lama5Q61001 3718 aa4.35□□□□□ -1.71
Lig4-202ENSMUST00000170033 Bles03Q8VD62 251 aa4.35□□□□□ -1.71
Lig4-202ENSMUST00000170033 Serp1Q9Z1W5 66 aa4.35□□□□□ -1.71
Lig4-202ENSMUST00000170033 Ighv2-9A0A075B5Q5 116 aa4.35□□□□□ -1.71
Lig4-202ENSMUST00000170033 Gm12216A0A1W2P827 62 aa4.35□□□□□ -1.71
Lig4-202ENSMUST00000170033 Gm17577J3QNF7 156 aa4.35□□□□□ -1.71
Lig4-202ENSMUST00000170033 Odf3l2Q3TZ65 277 aa4.35□□□□□ -1.71
Lig4-202ENSMUST00000170033 Nop10Q9CQS2 64 aa4.35□□□□□ -1.71
Lig4-202ENSMUST00000170033 Med13lQ6JPI3 2207 aa4.35□□□□□ -1.71
Lig4-202ENSMUST00000170033 Gm16381A0A1Y7VKT9 73 aa4.35□□□□□ -1.71
Lig4-202ENSMUST00000170033 Gm20538F6Z9R1 75 aa4.35□□□□□ -1.71
Lig4-202ENSMUST00000170033 A930002H24RikQ8C8Y3 163 aa4.35□□□□□ -1.71
Lig4-202ENSMUST00000170033 Gm26620Q9CY65 116 aa4.35□□□□□ -1.71
Lig4-202ENSMUST00000170033 Igkv4-61A0A0G2JH00 117 aa4.34□□□□□ -1.71
Lig4-202ENSMUST00000170033 Gm12353A2AGJ4 60 aa4.34□□□□□ -1.71
Lig4-202ENSMUST00000170033 Ube2d4D3YUH6 135 aa4.34□□□□□ -1.71
Lig4-202ENSMUST00000170033 NbeaQ9EPN1 2936 aa4.34□□□□□ -1.72
Lig4-202ENSMUST00000170033 Ighv2-2A0A075B5P8 116 aa4.34□□□□□ -1.72
Lig4-202ENSMUST00000170033 Krtap16-1A2A5X5 502 aa4.34□□□□□ -1.72
Lig4-202ENSMUST00000170033 1700011M02RikB1AX35 88 aa4.34□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 43 ms