RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Znf575Q3TXZ1 239 aa8.61□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Igkv8-26A0A075B5N5 123 aa8.6□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Psmb8P28063 276 aa8.6□□□□□ -1.03
Ndc1-204ENSMUST00000139560 HrnrQ8VHD8 2496 aa8.6□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Cox8cA6H666 72 aa8.6□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Acyp1P56376 99 aa8.6□□□□□ -1.03
Ndc1-204ENSMUST00000139560 9230102O04RikA2ASX7 82 aa8.59□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Gm10490F6VBM2 120 aa8.59□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Gm17577J3QNF7 156 aa8.59□□□□□ -1.03
Ndc1-204ENSMUST00000139560 4930432M17RikQ3V0W9 174 aa8.59□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Trav4-3A0A0B4J1K1 110 aa8.59□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Fxyd5P97808 178 aa8.59□□□□□ -1.03
Ndc1-204ENSMUST00000139560 BptfA2A654 3036 aaKnown RBP8.59□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Ly6c2P0CW03 131 aa8.58□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Itpr1P11881 2749 aa8.58□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Ube2d1P61080 147 aaKnown RBP8.58□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Vpreb1P13372 142 aa8.58□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Trbv13-2A0A140T8N6 113 aa8.57□□□□□ -1.04
Ndc1-204ENSMUST00000139560 1700011M02RikB1AX35 88 aa8.57□□□□□ -1.04
Ndc1-204ENSMUST00000139560 9530003J23RikQ8BM26 151 aa8.57□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Gm10226O88253 85 aa8.56□□□□□ -1.04
Ndc1-204ENSMUST00000139560 SbsponQ3UPR9 264 aa8.56□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Defb40Q70KL2 73 aa8.56□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Gphb5Q812B2 130 aa8.56□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Defb2P82020 71 aa8.56□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Crip3Q6Q6R3 243 aa8.56□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Tmem213Q08EA8 116 aa8.55□□□□□ -1.04
Ndc1-204ENSMUST00000139560 1700012A03RikQ9DAF1 130 aa8.55□□□□□ -1.04
Ndc1-204ENSMUST00000139560 1700056E22RikF7CNM6 234 aa8.54□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Cox7b2Q9D2H1 82 aa8.54□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Cdip1Q9DB75 208 aa8.54□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Lrp4Q8VI56 1905 aa8.54□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Igkv4-92A0A0B4J1I2 117 aa8.53□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Klk9Q32M27 251 aa8.53□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Ovol3D3YYM0 189 aa8.53□□□□□ -1.04
Ndc1-204ENSMUST00000139560 P06320 134 aa8.53□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Ube2d3P61079 147 aa8.53□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Ube2d2P62838 147 aa8.53□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Vpreb2P13373 142 aa8.53□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Fbn2Q61555 2907 aa8.52□□□□□ -1.04
Ndc1-204ENSMUST00000139560 Gm17521F6QAC8 156 aa8.52□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Fhl2O70433 279 aa8.52□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Gm37389A0A0A6YW05 95 aa8.52□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Ighv2-6-8A0A0A6YWY9 116 aa8.52□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Igkv3-10A0A0G2JGN0 119 aa8.52□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Defb38Q7TNV7 63 aa8.52□□□□□ -1.05
Ndc1-204ENSMUST00000139560 B430305J03RikQ8BQQ8 176 aa8.52□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Ighv3-3A0A0A6YWL2 116 aa8.51□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Ubr5Q80TP3 2792 aa8.51□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Myo15bI7HPW8 3033 aa8.51□□□□□ -1.05
Ndc1-204ENSMUST00000139560 B230217C12RikE9Q3Z1 139 aa8.51□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Tfpi2O35536 230 aa8.51□□□□□ -1.05
Ndc1-204ENSMUST00000139560 TeppQ6IMH0 216 aa8.51□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Tmem223Q9CQE2 199 aaKnown RBP8.51□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Ube2d4D3YUH6 135 aa8.5□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Serp2Q6TAW2 65 aa8.5□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Igkv1-110A0A0B4J1I0 119 aa8.5□□□□□ -1.05
Ndc1-204ENSMUST00000139560 U90926O08546 118 aa8.5□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Pcsk5Q04592 1877 aa8.49□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Gm9805F6YK59 57 aa8.49□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Mast4Q811L6 2618 aa8.49□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Smrp1Q2MH31 260 aa8.49□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Igkv8-18A0A0B4J1J3 123 aa8.49□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Gm9767G3X930 207 aa8.48□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Ighv1-63A0A075B5X2 117 aa8.48□□□□□ -1.05
Ndc1-204ENSMUST00000139560 KalrnA2CG49 2964 aa8.48□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Ighv1-5A0A0A6YWG2 117 aa8.48□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Shisa2Q8QZV2 295 aa8.48□□□□□ -1.05
Ndc1-204ENSMUST00000139560 RelnQ60841 3461 aa8.48□□□□□ -1.05
Ndc1-204ENSMUST00000139560 PscaP57096 123 aa8.47□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Timm17bQ9Z0V7 172 aa8.47□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Trav14-1A0A0G2JF94 121 aa8.47□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Gm10735Q3US96 136 aa8.47□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Wfdc13Q5DQQ6 81 aa8.47□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Igkv1-117A0A140T8M0 119 aa8.47□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Akap9Q70FJ1 3797 aa8.47□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Vpreb3D3Z6J4 130 aa8.47□□□□□ -1.05
Ndc1-204ENSMUST00000139560 E130114P18RikF6S0S7 154 aa8.47□□□□□ -1.05
Ndc1-204ENSMUST00000139560 4930524J08RikQ9CUJ5 163 aa8.47□□□□□ -1.05
Ndc1-204ENSMUST00000139560 SnurfQ9WU12 71 aa8.47□□□□□ -1.05
Ndc1-204ENSMUST00000139560 B9d2Q3UK10 175 aa8.46□□□□□ -1.05
Ndc1-204ENSMUST00000139560 Gm8439G3UWA7 96 aa8.46□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Ighv1-61P01749 117 aa8.46□□□□□ -1.06
Ndc1-204ENSMUST00000139560 CenpwQ3URR0 86 aa8.46□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Tns1E9Q0S6 1888 aaKnown RBP8.46□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Col4a4Q9QZR9 1682 aa8.46□□□□□ -1.06
Ndc1-204ENSMUST00000139560 NpwA0A1L1STR8 176 aa8.46□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Gm10401E9Q3K6 71 aa8.46□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Wdfy4E9Q2M9 3149 aa8.46□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Ndufs5Q99LY9 106 aa8.45□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Fgfbp3Q1HCM0 245 aa8.45□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Fam19a1Q7TPG8 133 aa8.45□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Ube2aQ9Z255 152 aa8.45□□□□□ -1.06
Ndc1-204ENSMUST00000139560 CnfnQ6PCW6 111 aa8.44□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Znf580Q9DB38 172 aa8.44□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Pla2g1bQ9Z0Y2 146 aa8.44□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Kmt2bO08550 2713 aa8.44□□□□□ -1.06
Ndc1-204ENSMUST00000139560 SptssbQ925E8 76 aa8.44□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Cdc42se2Q8BGH7 84 aa8.43□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Ankrd17Q99NH0 2603 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms