RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Ighv1-59A0A0A6YXE0 117 aa5.36□□□□□ -1.55
Bdnf-204ENSMUST00000111044 P01738 130 aa5.36□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Crlf1Q9JM58 425 aa5.36□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Ighv10-3A0A075B5T6 119 aa5.35□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Trav9-2A0A075B647 113 aa5.35□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Trav9-4A0A0B4J1K2 113 aa5.35□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Pgpep1lQ9CWB5 130 aa5.35□□□□□ -1.55
Bdnf-204ENSMUST00000111044 OtoglF7A4A7 2325 aa5.35□□□□□ -1.55
Bdnf-204ENSMUST00000111044 1810032O08RikE9PZV8 113 aa5.35□□□□□ -1.55
Bdnf-204ENSMUST00000111044 1810062G17RikG3X8Y2 129 aa5.35□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Krtap26-1Q9D7N2 215 aa5.35□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Q9DAA7 145 aa5.35□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Ighv2-9-1A0A075B697 116 aa5.35□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Gm9970F6ZED4 185 aa5.35□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Trav13-4-dv7A0A075B6C2 110 aa5.34□□□□□ -1.55
Bdnf-204ENSMUST00000111044 NbasE9Q411 2356 aa5.34□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Pkd1l2Q7TN88 2461 aa5.34□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Chd8Q09XV5 2582 aaKnown RBP5.34□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Ighv2-7A0A075B5Q8 116 aa5.34□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Igkv8-21A0A140T8P7 120 aa5.34□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Cd164Q9R0L9 197 aa5.34□□□□□ -1.55
Bdnf-204ENSMUST00000111044 Igkv8-26A0A075B5N5 123 aa5.34□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Trav9n-2A0A0G2JDP3 113 aa5.34□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Igkv1-99F6XWB2 120 aa5.34□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Pde6gP09174 87 aa5.34□□□□□ -1.56
Bdnf-204ENSMUST00000111044 CnbpP53996 178 aaKnown RBP5.34□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Sox16Q62247 57 aa5.34□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Gm5142Q8C5X9 133 aa5.34□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Trbv13-2A0A140T8N6 113 aa5.33□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Gm10553J3QPF1 123 aa5.33□□□□□ -1.56
Bdnf-204ENSMUST00000111044 P01745 121 aa5.33□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Cela2aP05208 271 aa5.33□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Tcl1b3P56842 122 aa5.33□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Lyrm9Q3UN90 78 aa5.33□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Cdc42se2Q8BGH7 84 aa5.33□□□□□ -1.56
Bdnf-204ENSMUST00000111044 B230359F08RikA0A0B4J1K3 109 aa5.33□□□□□ -1.56
Bdnf-204ENSMUST00000111044 MsmbO08540 113 aa5.33□□□□□ -1.56
Bdnf-204ENSMUST00000111044 PspnO70300 156 aa5.33□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Prr9Q8BV84 116 aa5.33□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Akap6E9Q9K8 2307 aa5.32□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Trav13-1A0A075B644 110 aa5.32□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Prp2P05143 317 aa5.32□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Pla2g2aP31482 146 aa5.32□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Q99M08 65 aa5.32□□□□□ -1.56
Bdnf-204ENSMUST00000111044 P01786 117 aa5.32□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Svep1A2AVA0 3567 aa5.32□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Ighv2-5A0A0A6YY69 116 aa5.32□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Igkv4-68A0A0B4J1I7 117 aa5.32□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Spint4Q9D263 159 aa5.32□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Prpf8Q99PV0 2335 aaKnown RBP5.32□□□□□ -1.56
Bdnf-204ENSMUST00000111044 P01755 137 aa5.31□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Pla2g2cP48076 150 aa5.31□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Ttc28Q80XJ3 2450 aa5.31□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Sprr3O09116 238 aa5.31□□□□□ -1.56
Bdnf-204ENSMUST00000111044 P06320 134 aa5.31□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Gm21994F6T2D2 329 aa5.31□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Cmya5Q70KF4 3739 aa5.31□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Ighv10-1A0A0B4J1J6 119 aa5.3□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Klk12B2RVZ0 247 aa5.3□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Gm10570F6VB42 170 aa5.3□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Igkv8-18A0A0B4J1J3 123 aa5.3□□□□□ -1.56
Bdnf-204ENSMUST00000111044 P01819 144 aa5.3□□□□□ -1.56
Bdnf-204ENSMUST00000111044 FshbQ60687 130 aa5.3□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Fam19a3Q7TPG6 132 aa5.3□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Cd99Q8VCN6 175 aa5.3□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Gm28374F6SG70 93 aa5.3□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Gm9903Q8C9Y8 129 aa5.3□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Gm10401E9Q3K6 71 aa5.29□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Reg3gO09049 174 aa5.29□□□□□ -1.56
Bdnf-204ENSMUST00000111044 NrgnP60761 78 aa5.29□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Zfand2aQ9JII7 171 aa5.29□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Ighv5-8A0A075B676 92 aa5.29□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Trav13d-4A0A0G2JFX3 110 aa5.29□□□□□ -1.56
Bdnf-204ENSMUST00000111044 E130114P18RikF6S0S7 154 aa5.29□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Odf3l2Q3TZ65 277 aa5.29□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Fam229bQ8CF36 80 aa5.29□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Plac8l1Q08EJ0 177 aa5.28□□□□□ -1.56
Bdnf-204ENSMUST00000111044 E130208F15RikQ3UPV3 143 aa5.28□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Igkv8-27A0A0G2JF28 120 aa5.28□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Igkv8-30A0A140T8M3 121 aa5.28□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Tfpi2O35536 230 aa5.28□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Gm10226O88253 85 aa5.28□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Zfyve26Q5DU37 2529 aa5.28□□□□□ -1.56
Bdnf-204ENSMUST00000111044 Dad1P61804 113 aa5.27□□□□□ -1.57
Bdnf-204ENSMUST00000111044 CrygfQ9CXV3 174 aa5.27□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Tomm7Q9D173 55 aa5.27□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Bri3P28662 125 aa5.27□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Lmo4P61969 165 aa5.27□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Wfdc15aQ8BH89 80 aa5.27□□□□□ -1.57
Bdnf-204ENSMUST00000111044 4930470P17RikQ9D542 155 aa5.26□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Fam110dQ80X91 271 aa5.26□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Sorl1O88307 2215 aaKnown RBP5.26□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Ighv2-2A0A075B5P8 116 aa5.26□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Trav9n-4A0A075B631 113 aa5.26□□□□□ -1.57
Bdnf-204ENSMUST00000111044 P01821 116 aa5.26□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Ube2e2Q91W82 201 aa5.26□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Ighv2-9A0A075B5Q5 116 aa5.25□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Trav9d-3A0A075B695 113 aa5.25□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Igkv1-110A0A0B4J1I0 119 aa5.25□□□□□ -1.57
Bdnf-204ENSMUST00000111044 A830005F24RikQ8BRT5 167 aa5.25□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms