RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 5730596B20RikQ8BQ08 205 aa4.98□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Ighv1-63A0A075B5X2 117 aa4.98□□□□□ -1.61
Col6a6-201ENSMUST00000060896 P01745 121 aa4.98□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Rbmy1bQ60990 380 aa4.98□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Tmem213Q08EA8 116 aa4.98□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Spink13Q3UTS8 97 aa4.98□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Gm9922Q8C3P1 144 aa4.98□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Tm2d2Q8R0I4 213 aa4.98□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Trav11A0A0B4J1J9 114 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 A0A286YCN5 57 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Hbb-b2P02089 147 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Tenm3Q9WTS6 2715 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Zfp951A0A087WRH0 451 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Psmb11Q8BG41 302 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Atp5g3P56384 141 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Ube2wQ8VDW4 151 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Q9DAQ5 155 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Igkv4-53A0A0G2JFC6 119 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Igkv6-13A0A0G2JGY3 119 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Cmc4Q61908 68 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Cd99Q8VCN6 175 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 CrygfQ9CXV3 174 aa4.97□□□□□ -1.61
Col6a6-201ENSMUST00000060896 Igkv3-2A0A075B5P0 119 aa4.96□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Gm10735Q3US96 136 aa4.96□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Ly6hQ9WUC3 139 aa4.96□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Ighv1-62-1A0A075B5U3 116 aa4.96□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Gm10251J3QPM5 127 aa4.96□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Znf580Q9DB38 172 aa4.96□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Samd13D3YUG0 102 aa4.96□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Gm10518F6UQQ9 182 aa4.96□□□□□ -1.62
Col6a6-201ENSMUST00000060896 P01755 137 aa4.96□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Klk12B2RVZ0 247 aa4.95□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Sec61gP60060 68 aa4.95□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Fgfbp3Q1HCM0 245 aa4.95□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Shisa2Q8QZV2 295 aa4.95□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Cdk2ap2Q9CPY4 127 aa4.95□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Wfdc12Q9JHY3 85 aa4.95□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Ighv8-12A0A0G2JDE1 119 aa4.95□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Igkv4-61A0A0G2JH00 117 aa4.95□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Gm16381A0A1Y7VKT9 73 aa4.94□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Reg3bP35230 175 aa4.94□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Ppp1r32Q148A4 427 aa4.94□□□□□ -1.62
Col6a6-201ENSMUST00000060896 4930442H23RikQ9D5G7 103 aa4.94□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Cdip1Q9DB75 208 aa4.94□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Trav9n-4A0A075B631 113 aa4.94□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Ube2d1P61080 147 aaKnown RBP4.94□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Igkv1-88A0A140T8N1 120 aa4.94□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Lgals4Q8K419 326 aa4.94□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Igkv2-109A0A075B5K6 120 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Ighv2-6-8A0A0A6YWY9 116 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Gm10647E9Q8X0 124 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 MifP34884 115 aaKnown RBP4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Ube2d3P61079 147 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Ube2d2P62838 147 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Fxyd5P97808 178 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 PemtQ61907 199 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 MplkipQ9D011 178 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 D730001G18RikA0A087WQU7 115 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Ighv1-5A0A0A6YWG2 117 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Igkv4-54A0A0G2JES9 117 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Krtap27-1E9PX37 202 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Gm9936Q8C864 160 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Crip2Q9DCT8 208 aaKnown RBP4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Klk11Q9QYN3 276 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Gm17472A0A075B683 117 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Atp5eP56382 52 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Defa25Q5G864 92 aa4.93□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Ighv8-5A0A0A6YY60 119 aa4.92□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Defa28D3Z1V9 94 aa4.92□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Krtap24-1G3X9A2 248 aa4.92□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Cdc42se2Q8BGH7 84 aa4.92□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Pdzd2E9Q1M1 2796 aa4.92□□□□□ -1.62
Col6a6-201ENSMUST00000060896 BC025920Q3US60 128 aa4.92□□□□□ -1.62
Col6a6-201ENSMUST00000060896 CdsnQ7TPC1 561 aa4.92□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Csmd3Q80T79 3707 aa4.92□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Tfpi2O35536 230 aa4.92□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Hist1h4aP62806 103 aaKnown RBP4.92□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Itpr2Q9Z329 2701 aa4.92□□□□□ -1.62
Col6a6-201ENSMUST00000060896 1700011M02RikB1AX35 88 aa4.91□□□□□ -1.62
Col6a6-201ENSMUST00000060896 1700010B08RikQ9DAI7 102 aa4.91□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Igkv1-122A0A140T8M9 119 aa4.91□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Lage3Q9CR70 148 aa4.91□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Lamtor3O88653 124 aa4.91□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Defa7P50705 93 aa4.91□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Pglyrp4Q0VB07 374 aa4.91□□□□□ -1.62
Col6a6-201ENSMUST00000060896 AI854703Q8BIN3 203 aa4.91□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Gm20726G3UX18 150 aa4.9□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Spry2Q9QXV8 315 aa4.9□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Ighv1-59A0A0A6YXE0 117 aa4.9□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Igkv4-72A0A0B4J1I4 117 aa4.9□□□□□ -1.62
Col6a6-201ENSMUST00000060896 4930432M17RikQ3V0W9 174 aa4.9□□□□□ -1.62
Col6a6-201ENSMUST00000060896 Trbv13-2A0A140T8N6 113 aa4.9□□□□□ -1.63
Col6a6-201ENSMUST00000060896 Gm10135F6TEE5 83 aa4.9□□□□□ -1.63
Col6a6-201ENSMUST00000060896 Rpl18aP62717 176 aaKnown RBP4.9□□□□□ -1.63
Col6a6-201ENSMUST00000060896 Plac8l1Q08EJ0 177 aa4.9□□□□□ -1.63
Col6a6-201ENSMUST00000060896 9530053A07RikE9PVG8 2581 aa4.89□□□□□ -1.63
Col6a6-201ENSMUST00000060896 CrygeQ03740 174 aa4.89□□□□□ -1.63
Col6a6-201ENSMUST00000060896 Gm9747Q810H1 104 aa4.89□□□□□ -1.63
Col6a6-201ENSMUST00000060896 A830031A19RikQ8BNT5 113 aa4.89□□□□□ -1.63
Col6a6-201ENSMUST00000060896 Gm7137J3QMW1 236 aa4.89□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms