RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Rhox8Q6VSS7 320 aa12.76□□□□□ -0.37
Col6a6-201ENSMUST00000060896 NischQ80TM9 1593 aa12.26□□□□□ -0.45
Col6a6-201ENSMUST00000060896 Gm35339A0A140LHH9 1649 aa12.22□□□□□ -0.45
Col6a6-201ENSMUST00000060896 Ccdc136Q3TVA9 1136 aa11.69□□□□□ -0.54
Col6a6-201ENSMUST00000060896 Ehmt2Q9Z148 1263 aaKnown RBP11.64□□□□□ -0.55
Col6a6-201ENSMUST00000060896 Abcc9P70170 1546 aa11.63□□□□□ -0.55
Col6a6-201ENSMUST00000060896 Abcc8B2RUS7 1588 aa11.57□□□□□ -0.56
Col6a6-201ENSMUST00000060896 Cngb1E1AZ71 1325 aa11.26□□□□□ -0.61
Col6a6-201ENSMUST00000060896 Gab3Q8BSM5 595 aa11.23□□□□□ -0.61
Col6a6-201ENSMUST00000060896 Trim41Q5NCC3 630 aa11.21□□□□□ -0.61
Col6a6-201ENSMUST00000060896 Esf1Q3V1V3 845 aaKnown RBP11.16□□□□□ -0.62
Col6a6-201ENSMUST00000060896 ScribQ80U72 1612 aa11.12□□□□□ -0.63
Col6a6-201ENSMUST00000060896 Zcchc6Q5BLK4 1491 aaKnown RBP11.01□□□□□ -0.65
Col6a6-201ENSMUST00000060896 Rpgrip1Q9EPQ2 1331 aa10.96□□□□□ -0.65
Col6a6-201ENSMUST00000060896 Ccdc180J3QNE4 1664 aa10.96□□□□□ -0.65
Col6a6-201ENSMUST00000060896 NacadQ5SWP3 1504 aa10.93□□□□□ -0.66
Col6a6-201ENSMUST00000060896 Myt1lP97500 1187 aa10.88□□□□□ -0.67
Col6a6-201ENSMUST00000060896 HrcG5E8J6 738 aa10.86□□□□□ -0.67
Col6a6-201ENSMUST00000060896 Rtl1Q7M732 1744 aa10.85□□□□□ -0.67
Col6a6-201ENSMUST00000060896 Dcaf1Q80TR8 1506 aa10.85□□□□□ -0.67
Col6a6-201ENSMUST00000060896 Zeb1Q64318 1117 aa10.84□□□□□ -0.67
Col6a6-201ENSMUST00000060896 Acin1Q9JIX8 1338 aaKnown RBP10.82□□□□□ -0.68
Col6a6-201ENSMUST00000060896 Npm2Q80W85 207 aa10.8□□□□□ -0.68
Col6a6-201ENSMUST00000060896 Rb1cc1Q9ESK9 1588 aa10.74□□□□□ -0.69
Col6a6-201ENSMUST00000060896 Kdm5dQ62240 1548 aa10.73□□□□□ -0.69
Col6a6-201ENSMUST00000060896 UbtfP25976 765 aaKnown RBP10.71□□□□□ -0.69
Col6a6-201ENSMUST00000060896 Il27Q8K3I6 234 aa10.7□□□□□ -0.7
Col6a6-201ENSMUST00000060896 Chic1Q8CBW7 227 aa10.67□□□□□ -0.7
Col6a6-201ENSMUST00000060896 Wdr66E9Q743 1299 aa10.66□□□□□ -0.7
Col6a6-201ENSMUST00000060896 Sycp2Q9CUU3 1500 aa10.62□□□□□ -0.71
Col6a6-201ENSMUST00000060896 Ppargc1bQ8VHJ7 1014 aa10.53□□□□□ -0.72
Col6a6-201ENSMUST00000060896 Ap3b1Q9Z1T1 1105 aa10.53□□□□□ -0.72
Col6a6-201ENSMUST00000060896 Las1lA2BE28 776 aaKnown RBP10.5□□□□□ -0.73
Col6a6-201ENSMUST00000060896 Pcgf6Q99NA9 353 aa10.5□□□□□ -0.73
Col6a6-201ENSMUST00000060896 Baz1aO88379 1555 aa10.5□□□□□ -0.73
Col6a6-201ENSMUST00000060896 Ube2uB1AUC4 352 aa10.48□□□□□ -0.73
Col6a6-201ENSMUST00000060896 Crybg2B7ZCC2 1516 aa10.47□□□□□ -0.73
Col6a6-201ENSMUST00000060896 Supt5hO55201 1082 aaKnown RBP10.45□□□□□ -0.74
Col6a6-201ENSMUST00000060896 Mier1Q5UAK0 511 aa10.44□□□□□ -0.74
Col6a6-201ENSMUST00000060896 Brd4Q9ESU6 1400 aaKnown RBP10.41□□□□□ -0.74
Col6a6-201ENSMUST00000060896 Plekhg3Q4VAC9 1341 aa10.4□□□□□ -0.75
Col6a6-201ENSMUST00000060896 Cep164Q5DU05 1446 aa10.39□□□□□ -0.75
Col6a6-201ENSMUST00000060896 NefmP08553 848 aa10.39□□□□□ -0.75
Col6a6-201ENSMUST00000060896 Pds5bQ4VA53 1446 aaKnown RBP10.36□□□□□ -0.75
Col6a6-201ENSMUST00000060896 Rsf1E9PWW9 1441 aaKnown RBP10.33□□□□□ -0.76
Col6a6-201ENSMUST00000060896 BicraF8VPZ9 1578 aa10.32□□□□□ -0.76
Col6a6-201ENSMUST00000060896 Fam50aQ9WV03 339 aaKnown RBP10.3□□□□□ -0.76
Col6a6-201ENSMUST00000060896 Lmod2Q3UHZ5 550 aa10.28□□□□□ -0.76
Col6a6-201ENSMUST00000060896 Cecr2E9Q2Z1 1453 aa10.25□□□□□ -0.77
Col6a6-201ENSMUST00000060896 Ccdc88bQ4QRL3 1481 aa10.25□□□□□ -0.77
Col6a6-201ENSMUST00000060896 Golga3P55937 1487 aa10.23□□□□□ -0.77
Col6a6-201ENSMUST00000060896 Eid3Q3V124 375 aa10.23□□□□□ -0.77
Col6a6-201ENSMUST00000060896 Npm1Q61937 292 aaKnown RBP10.2□□□□□ -0.78
Col6a6-201ENSMUST00000060896 Atad2bE9Q166 1460 aaKnown RBP10.19□□□□□ -0.78
Col6a6-201ENSMUST00000060896 Ercc6F8VPZ5 1481 aa10.16□□□□□ -0.78
Col6a6-201ENSMUST00000060896 Sall2Q9QX96 1004 aa10.16□□□□□ -0.78
Col6a6-201ENSMUST00000060896 Clip1Q922J3 1391 aa10.16□□□□□ -0.78
Col6a6-201ENSMUST00000060896 Slc24a1Q91WD8 1130 aa10.16□□□□□ -0.78
Col6a6-201ENSMUST00000060896 Mapk8ip2Q9ERE9 830 aa10.15□□□□□ -0.78
Col6a6-201ENSMUST00000060896 Neurod1Q60867 357 aa10.14□□□□□ -0.79
Col6a6-201ENSMUST00000060896 TonslQ6NZL6 1363 aa10.13□□□□□ -0.79
Col6a6-201ENSMUST00000060896 Smarca2Q6DIC0 1577 aa10.12□□□□□ -0.79
Col6a6-201ENSMUST00000060896 Ubl4bQ9CQ84 188 aa10.12□□□□□ -0.79
Col6a6-201ENSMUST00000060896 NclP09405 707 aaKnown RBP10.08□□□□□ -0.8
Col6a6-201ENSMUST00000060896 Baz1bQ9Z277 1479 aa10.08□□□□□ -0.8
Col6a6-201ENSMUST00000060896 Cdk11bP24788 784 aaKnown RBP10.07□□□□□ -0.8
Col6a6-201ENSMUST00000060896 Nop58Q6DFW4 536 aaKnown RBP10.07□□□□□ -0.8
Col6a6-201ENSMUST00000060896 Smarca4Q3TKT4 1613 aaKnown RBP10.05□□□□□ -0.8
Col6a6-201ENSMUST00000060896 CftrP26361 1476 aa10.05□□□□□ -0.8
Col6a6-201ENSMUST00000060896 Kif15Q6P9L6 1387 aa10.05□□□□□ -0.8
Col6a6-201ENSMUST00000060896 Synj1Q8CHC4 1574 aa10.04□□□□□ -0.8
Col6a6-201ENSMUST00000060896 Aebp2Q9Z248 504 aaKnown RBP10.04□□□□□ -0.8
Col6a6-201ENSMUST00000060896 Zbtb7cQ8VCZ7 619 aa10.03□□□□□ -0.8
Col6a6-201ENSMUST00000060896 Fkbp15Q6P9Q6 1216 aaKnown RBP9.98□□□□□ -0.81
Col6a6-201ENSMUST00000060896 Setd5Q5XJV7 1441 aa9.96□□□□□ -0.81
Col6a6-201ENSMUST00000060896 Chic2Q9D9G3 165 aa9.96□□□□□ -0.82
Col6a6-201ENSMUST00000060896 DiexfQ8BTT6 772 aaKnown RBP9.95□□□□□ -0.82
Col6a6-201ENSMUST00000060896 Thoc2B1AZI6 1594 aaKnown RBP9.95□□□□□ -0.82
Col6a6-201ENSMUST00000060896 Phldb1Q6PDH0 1371 aaKnown RBP9.95□□□□□ -0.82
Col6a6-201ENSMUST00000060896 Iqgap2Q3UQ44 1575 aa9.95□□□□□ -0.82
Col6a6-201ENSMUST00000060896 BlmO88700 1416 aa9.95□□□□□ -0.82
Col6a6-201ENSMUST00000060896 ClspnQ80YR7 1315 aa9.94□□□□□ -0.82
Col6a6-201ENSMUST00000060896 Gm38655A0A286YDK6 273 aa9.94□□□□□ -0.82
Col6a6-201ENSMUST00000060896 Ifnlr1Q8CGK5 535 aa9.93□□□□□ -0.82
Col6a6-201ENSMUST00000060896 Cep162Q6ZQ06 1403 aa9.91□□□□□ -0.82
Col6a6-201ENSMUST00000060896 Zbtb4Q5F293 982 aa9.9□□□□□ -0.82
Col6a6-201ENSMUST00000060896 Myt1Q8CFC2 1127 aa9.89□□□□□ -0.83
Col6a6-201ENSMUST00000060896 Rapgef2Q8CHG7 1496 aa9.88□□□□□ -0.83
Col6a6-201ENSMUST00000060896 Fmn1Q05860 1466 aa9.87□□□□□ -0.83
Col6a6-201ENSMUST00000060896 Eif5bQ05D44 1216 aaKnown RBP9.86□□□□□ -0.83
Col6a6-201ENSMUST00000060896 Fam135aQ6NS59 1506 aa9.84□□□□□ -0.83
Col6a6-201ENSMUST00000060896 Wdr62Q3U3T8 1523 aa9.84□□□□□ -0.83
Col6a6-201ENSMUST00000060896 Csrnp3P59055 597 aa9.83□□□□□ -0.84
Col6a6-201ENSMUST00000060896 Eea1Q8BL66 1411 aa9.83□□□□□ -0.84
Col6a6-201ENSMUST00000060896 Cc2d2aQ8CFW7 1633 aa9.83□□□□□ -0.84
Col6a6-201ENSMUST00000060896 Cttnbp2B9EJA2 1648 aa9.82□□□□□ -0.84
Col6a6-201ENSMUST00000060896 CenpbP27790 599 aa9.82□□□□□ -0.84
Col6a6-201ENSMUST00000060896 Hnrnpul2Q00PI9 745 aaKnown RBP9.81□□□□□ -0.84
Col6a6-201ENSMUST00000060896 Frmpd1A2AKB4 1549 aa9.8□□□□□ -0.84
Col6a6-201ENSMUST00000060896 Dnajc5bQ9CQ94 199 aa9.8□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms